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Oryza sativa
cluster # 411 cluster # 411       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_411#0 length = 1176 sequences # 2  

consensusID : consensus_411#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1176
fasta sequence
                              [ACCATCATCATCTTCATCTCCTACCTCCTCTCCTCTCCTCTCCTCTTCTCCACTACCCAACTTTTGCTCCCAACACATCTTTGTTTCGATCGACCGATCGATCAGCTCTAGCTCAGCCGCTACTCCTACGTCAAGGAGAAGCGCCTCGACGCCGGCGACGTCGTCCACTTCGAGCGCGTCCGCGGCCTCGGCGCCGCCGACCGCCTCTTCATCGGCTGCAGGCGCCGCGGCGAGAGCGCGCCCGCGCCGCCGCCCGCCGTTCGCGTCACGCCGCAGCCGCCTGCCCTCAACGGCGGCGAGCAGCAGCCGTGGAGCCCAATGTGTTACAGCACGTCGGGCTCGTCCTACGACCCTACCAGCCCTGCCAATTCATATGCCTACCATCGCTCCGTAGACCAAGATCACAGCGACATACTACACGCAGGAGAGTCGCAGAGAGAAGCAGACGCCAAGAGCAGCAGCGCGGCGTCGGCGCCGCCGCCGTCGAGGCGGCTCAGGCTGTTCGGCGTTAACCTCGACTGCGGCCCGGAGCCGGAGGCGGATCAGGCGACGGCAATGTACGGCTACATGCACCACCAGAGCCCCTACGCCGCAGTGTCTACAGTGCCAAATTACTGGGGCAGCTAGTTGATGAGATGATGAGGAGATCTGAGGCCTTTGCTTGCAGAATCCTAACCACCAACAGTGAAACTAGTTACTACTACCACCAGCCTACTACTACTACACTCTGAACCAAGTGACAGGTTCGATTGAATTGACCTGTTGGAAGGGAAAAAAGAAGAAGGAAGTGGGGGGAGATCCCTTGTTTCCCGGGCAATCTTCCTTCCATGAATCATCAGAGTGCCCCTTTTCCTGGGTTTTTTTTACATTCTTGTCTTCCAGAAACCCTACTTACAGTACGGGGGCCCTTGCAGCAGGTGGGGAGGTTTCAGGAAACATCAGGTTGAAAAGGAGAGGGAGGAGAGAGATGGTGACACACCATGAGAAACAAACAGGAGAGAGAGAGAGAGAGGAAAAATTGACATGTTTTGCAAGTATGTATGTGTCATCTGTAGTATGTGACTGTGAGTGGGTCCATGAACAAACTGTGAAGTTGATGTATCCTTCTCCTGCTGCCTCCCCTGAACCTGAAGAAACAAAGTAATACCCCAATGGGGATTTTGTTCTCTTCCCCTT]

[+] EMBL AK110593             [ACCATCATCATCTTCATCTCCTACCTCCTCTCCTCTCCTCTCCTCTTCTCCACTACCCAACTTTTGCTCCCAACACATCTTTGTTTCGATCGACCGATCGATCAGCTCTAGCTCAGCCGCTACTCCTACGTCAAGGAGAAGCGCCTCGACGCCGGCGACGTCGTCCACTTCGAGCGCGTCCGCGGCCTCGGCGCCGCCGACCGCCTCTTCATCGGCTGCAGGCGCCGCGGCGAGAGCGCGCCCGCGCCGCCGCCCGCCGTTCGCGTCACGCCGCAGCCGCCTGCCCTCAACGGCGGCGAGCAGCAGCCGTGGAGCCCAATGTGTTACAGCACGTCGGGCTCGTCCTACGACCCTACCAGCCCTGCCAATTCATATGCCTACCATCGCTCCGTAGACCAAGATCACAGCGACATACTACACGCAGGAGAGTCGCAGAGAGAAGCAGACGCCAAGAGCAGCAGCGCGGCGTCGGCGCCGCCGCCGTCGAGGCGGCTCAGGCTGTTCGGCGTTAACCTCGACTGCGGCCCGGAGCCGGAGGCGGATCAGGCGACGGCAATGTACGGCTACATGCACCACCAGAGCCCCTACGCCGCAGTGTCTACAGTGCCAAATTACTGGGGCAGCTAGTTGATGAGATGATGAGGAGATCTGAGGCCTTTGCTTGCAGAATCCTAACCACCAACAGTGAAACTAGTTACTACTACCACCAGCCTACTACTACTACACTCTGAACCAAGTGACAGGTTCGATTGAATTGACCTGTTGGAAGGGAAAAAAGAAGAAGGAAGTGGGGGGAGATCCCTTGTTTCCCGGGCAATCTTCCTTCCATGAATCATCAGAGTGCCCCTTTTCCTGGGTTTTTTTTACATTCTTGTCTTCCAGAAACCCTACTTACAGTACGGGGGCCCTTGCAGCAGGTGGGGAGGTTTCAGGAAACATCAGGTTGAAAAGGAGAGGGAGGAGAGAGATGGTGACACACCATGAGAAACAAACAGGAGAGAGAGAGAGAGAGGAAAAATTGACATGTTTTGCAAGTATGTATGTGTCATCTGTAGTATGTGACTGTGAGTGGGTCCATGAACAAACTGTGAAGTTGATGTATCCTTCTCCTGCTGCCTCCCCTGAACCTGAAGAAACAAAGTAATACCCCAATGGGGATTTTGTTCTCTTCCCCTT]
[+] EMBL AU173134             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTACATTCTTGTNTTCCAGAAACCCTACTTACAGTACGGGGGCCCTTGCAGCAGGTGGGGAGGTTTCAGGAAACATCAGGTTGAAAAGGAGAGGGAGGAGAGAGATGGTGACACNCCATGAGAANCTAACAGGAGAGAGAGAGAGAGAGGAAAAATTGACATGTTTTGCAAGTATGTATGTGTCATCTGTAGTATGTGACTGTGAGTGGGTCCATGAACAANCTGTGAAGTTGATGTAaaaaaaaaa                                                                  ]


>consensus_411#0 ACCATCATCATCTTCATCTCCTACCTCCTCTCCTCTCCTCTCCTCTTCTCCACTACCCAA CTTTTGCTCCCAACACATCTTTGTTTCGATCGACCGATCGATCAGCTCTAGCTCAGCCGC TACTCCTACGTCAAGGAGAAGCGCCTCGACGCCGGCGACGTCGTCCACTTCGAGCGCGTC CGCGGCCTCGGCGCCGCCGACCGCCTCTTCATCGGCTGCAGGCGCCGCGGCGAGAGCGCG CCCGCGCCGCCGCCCGCCGTTCGCGTCACGCCGCAGCCGCCTGCCCTCAACGGCGGCGAG CAGCAGCCGTGGAGCCCAATGTGTTACAGCACGTCGGGCTCGTCCTACGACCCTACCAGC CCTGCCAATTCATATGCCTACCATCGCTCCGTAGACCAAGATCACAGCGACATACTACAC GCAGGAGAGTCGCAGAGAGAAGCAGACGCCAAGAGCAGCAGCGCGGCGTCGGCGCCGCCG CCGTCGAGGCGGCTCAGGCTGTTCGGCGTTAACCTCGACTGCGGCCCGGAGCCGGAGGCG GATCAGGCGACGGCAATGTACGGCTACATGCACCACCAGAGCCCCTACGCCGCAGTGTCT ACAGTGCCAAATTACTGGGGCAGCTAGTTGATGAGATGATGAGGAGATCTGAGGCCTTTG CTTGCAGAATCCTAACCACCAACAGTGAAACTAGTTACTACTACCACCAGCCTACTACTA CTACACTCTGAACCAAGTGACAGGTTCGATTGAATTGACCTGTTGGAAGGGAAAAAAGAA GAAGGAAGTGGGGGGAGATCCCTTGTTTCCCGGGCAATCTTCCTTCCATGAATCATCAGA GTGCCCCTTTTCCTGGGTTTTTTTTACATTCTTGTCTTCCAGAAACCCTACTTACAGTAC GGGGGCCCTTGCAGCAGGTGGGGAGGTTTCAGGAAACATCAGGTTGAAAAGGAGAGGGAG GAGAGAGATGGTGACACACCATGAGAAACAAACAGGAGAGAGAGAGAGAGAGGAAAAATT GACATGTTTTGCAAGTATGTATGTGTCATCTGTAGTATGTGACTGTGAGTGGGTCCATGA ACAAACTGTGAAGTTGATGTATCCTTCTCCTGCTGCCTCCCCTGAACCTGAAGAAACAAA GTAATACCCCAATGGGGATTTTGTTCTCTTCCCCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)