cluster # 4111

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Oryza sativa
cluster # 4111 cluster # 4111 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4111#0 length = 1549 sequences # 3
consensusID : consensus_4111#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1549
fasta sequence
                              [TTTTTTTTTTCTGATAGAGACAAGATATTTACCAGTCATTTCTGGGAACAGTGTTCCAAAAGGAAAAGGTGGGCACTAAACTACATTTGAGCACAGTTATCACCCCCTTTATATACTGTGAGCTCTATGCAAATGTTAGTGTAACAGCTGTGAGCTCTATGCACATCATCATTTGAAAACCACTGTGAAGATCAGGTATCTCACAAGAATCCACACCAATACCTAGCTGTAGGGGGTGTGTCCATAGAGCACATCAAAAGTAGTTTTGCCAAAGTGGAATGATAACCGGTA-TTGTACCAATATTCTG-CAAATACAACCTA-GTGGCCCATTGGGATGGACAAGA-TGCGTAAAACAACACAAATAAGTTTCTAGACACTGATTTACCCTCTCAGTCTGTCCATCTGATTTAGTTCAGGCTGATAAAAAAATGCAG-TTCAGAGCTTTTGCAGTTGGGGACTGGGTGTACTTGAAGTTAGCCTTATGTCCAATCTTCAGTTGCTCTCTAATACTCTGGTTAGTTCCCAGGTCTGTCATTTCAGCCTCAACTTTCTCATTGCTTGGCACAAGCGGAGGCCTCAACTTTGCCATTGCTTGGCACAAGCGGAGGACTAATAGAGTTCCACTGCTCTCCAACATGGGCATTAGCAGCTCTCTTCTATCCCCTGAGCTTTGCATCAACCATGCCTCTCGGCTGTCACAGCTGATGCGCAAAATGAGGTGAACCAGATAATCCCAGAGAAGCAGATGGCTCCTCTACATCAATTCATCTTGAATCTTCAAGCGCAGGTCCGCAGTCTTCTCAAGCAGCCATGCATTACATTTTCAATGCACTTGCCCTCAGCTCATGCCGCCTACCAAGCAGGAAATCGGGTTCTCTGAATACCTCTCTTCCGGCAAAAGAAGTATGATCACCATCAAACAATGGAAATCAAGCCAAGCCATTGATCATAGCAACTCAGCCATAGGAGCGCTTGTCACTCCCTCAGAGACAGGGAATCTATACTGATGTGGTTGAGAAATTCAGTGCAGCCTATCAAGCAAATCTGAGCACATTGGCAGGGACAGGTGAATGAAATCCAGCCAAAAAAAAGAAAGATTGAAAACAGAAGCGACTAACAAAGGCCTCTCTGCCTCTCGTGTGCTTGTCGCTCTTCAGAGTTCAGACCATAGAGATGCCAGCCCGATGGTCCGCGTCGCGCGCCTTGCCCTCCCCACGCGGCCGGCGGAGGCGGCGGAGGATGGCGAGCGCGACGGCGGCTAGCGTGGCGCCCACGAGGTCAGCGGCGGCGTCCCTGAGGGAGGCTCCCGAGGACCCGAAGAAACCGGCCTCGTCGGCGATCTCCTTGGCGGCCCCCGCGGCGAGGGATGCGGCGCAGCCCAGGGCGGCGGGGCGGCGACGGAGCGGGGATCTCGAGCTGCGGCCGGCAAGCGCGGCGCCGGCGAGGGCGATGAGGAAGCAGGCGAGAACGTGCTGCAGCTTATCGGCAGCCAGCCACTCATCGGACCACTCCATCCGCCGCCGCCGCCGCCGATGATTCGGTGTCGGACT]

[-] EMBL BM038055             [TTTTTTTTTTCTGATAGAGACAAGATATTTACCAGTCATTTCTGGGAACAGTGTTCCAAAAGGAAAAGGTGGGCACTAAACTACATTTGAGCACAGTTATCACCCCCTTTATATACTGTGAGCTCTATGCAAATGTTAGTGTAACAGCTGTGAGCTCTATGCACATCATCATTTGAAAACCACTGTGAAGATCAGGTATCTCACAAGAATCCACACCAATACCTAGCTGTAGGGGGTGTGTCCATAGAGCACATCAAAAGTAGTTTTGCCAAAGTGGAATGATAACCGGTATTTGTACCAATATTCTG CAAATACAACCTAGGTGGCCCATTGGGATGGACAAGA TGCGTAAAACAACACAAATAAGTTTCTAGACACTGATTTACCCTCTCAGTCTGTCCATCTGATTTAGTTCAGGCTGATAAAAAAATGCAG TTCAGAGCTTTTGCAGTTGGGGACTGGGTGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB667011             [                                                                                                                                                                                                                                                                             CAAAGTGGAATGATAACCGGTA TTGTACCTATATTCTGCCAAATACAACCTA GTGGCCCATTTGGATGGACAAGATTGCGTAAAACAACACAAATAAGTTTCTAGACACTGATTTACCCTCTCAGTCTGTCCATCTGATTTAGTTCAGGCTGATAAAAAAATGCAGCTTCAGAGCTTTTGCAGTTGGGGACTGGGTGTACTTGAAGTTAGCCTTATGTCCAATCTTCAGTTGCTCTCTAATACTCTGGTTAGTTCCCAGGTCTGTCATTTCAGCCTCAACTTTCTCATTGCTTGGCACAAGCGGAGGCCTCAACTTTGCCATTGCTTGGCACAAGCGGAGGACTAATAGAGTTCCACTGCTCTCCAACATGGGCATTAGCAGCTCTCTTCTATCCCCTGAGCTTTGCATCAACCATGCCTCTCGGCTGTCACAGCTGATGCGCAAAATGAGGTGAACCAGATAATCCCAGAGAAGCAGATGGCTCCTCTACATCAATTCATCTTGAATCTTCAAGCGCAGGTCCGCAGTCTTCTCAAGCAGCCATGCATTACATTTTCAATGCACTTGCCCTCAGCTCATGCCGCCTACCAAGCAGGAAATCGGGTTCTCTGAATACCTCTCTTCCGGCAAAAGAAGTATGATCACCATCAAACAATGGAAATCAAGCCAAGCCATTGATCATAGCAACTCAGCCATAGGAGCGCTTGTCACTCCCTCAGAGACAGGGAATCTATACTGATGTGGTTGAGAAATTCAGTGCAGCCTATCAAGCAAATCTGAGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB667010             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAGGCAGGAAATCGGGTTCTCTGAATACCTCTCTTCCGGCAAAAGAAGTATGATCACCATCAAACAATGGAAATCAAGCCAAGCCATTGATCATAGCAACTCAGCCATAGGAGCGCTTGTCACTCCCTCAGAGACAGGGAATGTATACTGATGTGGTTGAGAAATTCAGTGCAGCCTATCAAGCAAATGTGAGCACATTGGCAGGGACAGGTGAATGAAATCCAGCCAAAAAAAAGAAAGATTGAAAACAGAAGCGACTAACAAAGGCCTCTCTGCCTCTCGTGTGCTTGTCGCTCTTCAGAGTTCAGACCATAGAGATGCCAGCCCGATGGTCCGCGTCGCGCGCCTTGCCCTCCCCACGCGGCCGGCGGAGGCGGCGGAGGATGGCGAGCGCGACGGCGGCTAGCGTGGCGCCCACGAGGTCAGCGGCGGCGTCCCTGAGGGAGGCTCCCGAGGACCCGAAGAAACCGGCCTCGTCGGCGATCTCCTTGGCGGCCCCCGCGGCGAGGGATGCGGCGCAGCCCAGGGCGGCGGGGCGGCGACGGAGCGGGGATCTCGAGCTGCGGCCGGCAAGCGCGGCGCCGGCGAGGGCGATGAGGAAGCAGGCGAGAACGTGCTGCAGCTTATCGGCAGCCAGCCACTCATCGGACCACTCCATCCGCCGCCGCCGCCGCCGATGATTCGGTGTCGGACT]




>consensus_4111#0
TTTTTTTTTTCTGATAGAGACAAGATATTTACCAGTCATTTCTGGGAACAGTGTTCCAAA
AGGAAAAGGTGGGCACTAAACTACATTTGAGCACAGTTATCACCCCCTTTATATACTGTG
AGCTCTATGCAAATGTTAGTGTAACAGCTGTGAGCTCTATGCACATCATCATTTGAAAAC
CACTGTGAAGATCAGGTATCTCACAAGAATCCACACCAATACCTAGCTGTAGGGGGTGTG
TCCATAGAGCACATCAAAAGTAGTTTTGCCAAAGTGGAATGATAACCGGTATTGTACCAA
TATTCTGCAAATACAACCTAGTGGCCCATTGGGATGGACAAGATGCGTAAAACAACACAA
ATAAGTTTCTAGACACTGATTTACCCTCTCAGTCTGTCCATCTGATTTAGTTCAGGCTGA
TAAAAAAATGCAGTTCAGAGCTTTTGCAGTTGGGGACTGGGTGTACTTGAAGTTAGCCTT
ATGTCCAATCTTCAGTTGCTCTCTAATACTCTGGTTAGTTCCCAGGTCTGTCATTTCAGC
CTCAACTTTCTCATTGCTTGGCACAAGCGGAGGCCTCAACTTTGCCATTGCTTGGCACAA
GCGGAGGACTAATAGAGTTCCACTGCTCTCCAACATGGGCATTAGCAGCTCTCTTCTATC
CCCTGAGCTTTGCATCAACCATGCCTCTCGGCTGTCACAGCTGATGCGCAAAATGAGGTG
AACCAGATAATCCCAGAGAAGCAGATGGCTCCTCTACATCAATTCATCTTGAATCTTCAA
GCGCAGGTCCGCAGTCTTCTCAAGCAGCCATGCATTACATTTTCAATGCACTTGCCCTCA
GCTCATGCCGCCTACCAAGCAGGAAATCGGGTTCTCTGAATACCTCTCTTCCGGCAAAAG
AAGTATGATCACCATCAAACAATGGAAATCAAGCCAAGCCATTGATCATAGCAACTCAGC
CATAGGAGCGCTTGTCACTCCCTCAGAGACAGGGAATCTATACTGATGTGGTTGAGAAAT
TCAGTGCAGCCTATCAAGCAAATCTGAGCACATTGGCAGGGACAGGTGAATGAAATCCAG
CCAAAAAAAAGAAAGATTGAAAACAGAAGCGACTAACAAAGGCCTCTCTGCCTCTCGTGT
GCTTGTCGCTCTTCAGAGTTCAGACCATAGAGATGCCAGCCCGATGGTCCGCGTCGCGCG
CCTTGCCCTCCCCACGCGGCCGGCGGAGGCGGCGGAGGATGGCGAGCGCGACGGCGGCTA
GCGTGGCGCCCACGAGGTCAGCGGCGGCGTCCCTGAGGGAGGCTCCCGAGGACCCGAAGA
AACCGGCCTCGTCGGCGATCTCCTTGGCGGCCCCCGCGGCGAGGGATGCGGCGCAGCCCA
GGGCGGCGGGGCGGCGACGGAGCGGGGATCTCGAGCTGCGGCCGGCAAGCGCGGCGCCGG
CGAGGGCGATGAGGAAGCAGGCGAGAACGTGCTGCAGCTTATCGGCAGCCAGCCACTCAT
CGGACCACTCCATCCGCCGCCGCCGCCGCCGATGATTCGGTGTCGGACT
clustalw multiple alignements is not computed in this case