These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4117#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1779 fasta sequence [TCCCCTCCCGCGCCGGCCTCCCCCGCGGCGCTGCTCTGGCGGCGGCCGCGGCGGGTGGCTCCGACCACGTTCTGCTCCGCGCCGTCGCTCGGCCGCGTCGGGTGGCCGCGGCGGGAGGGTGCCGCCTGGCTGCTGTCGTTCCGCGCCGGCCCGGTTTCTTCCCCGTCGTCGGCGGCGGCGGGCGATCCTTCCCAGGCGCTCTCCGCGCTGCTCCCGCTCGTCGTCGCCGCCACCGCCGTCGCCGCGCTCGGCAACCCCGCTACCTTCTCATGGGTCTCCAAGGAGTACTACGCGCCTGCACTTGGCGGCATCATGCTCTCCATTGGCATCAAATTATCCATCGACGACTTCGCGTTGGCATTCAAGAGGCCGGTGCCTCTGACGATCGGCTATATGGCGCAGTACATTGTGAAGCCGCTGATGGGCGTGCTGATCGCGAGGGCCTTCGGGATGCCGTCGGCGTTCTTTGCAGGCTTTGTTCTTACTTGCTGCGTCTCCGGCGCGCAGCTGTCGAGCTATGCTAGCTTCCTGAGCAAAGGGGATGTTGCATTGAGCATTCTGTTGACAAGCTGCTCGACGATATCTTCGGTGGTTGTGACACCTGTTCTCACTGGACTGCTGATTGGTTCTGTGGTTCCTGTTGATGGGATCGCGATGGCGAAATCCATTTTGCAGGTGGTTCTTGTTCCTGTCACACTAGGTCTTCTTCTGAATACATATGCAAAAGCAGTCGTTAATGTCATTCAACCAGTAATGCCATTTGTTGCTATGTTGTGCACATCGCTTTGTATTGGAAGCCCTCTTGCTATCAACAGGAGCAAGATCTTATCTTCAGAAGGATTCCTGTTACTTCTCCCCATAGTGACTTTCCACATTGCTGCCTTCATTGTGGGTTACTGGATTTCCAAGTTGCCTATGTTGAGGCAAGAAGAGCCCGTTTGCAGAACTATTTCTGTATGTACCGGCATGCAGAGCTCCACCCTCGCTGGACTTCTTGCTACACAATTTCTTGGAAGTAGCCAGGCAGTTCCTGCAGCATGCTCAGTTGTTATCATGGCCATATTTGGTTTGACTCTAGCATCATACTGGGGAAATGGTTTGCGAATCAGAGATATCGGTTCGAGATTTGTTCCACAAGCTTCCGCAGGTGTGAGCTCATGATAAAGCTTTTGGGGTGCAGCATTTAGATTCGTTCATGGGCTCCCCCGTCAAGTTCCAGAATTCCTGAGCAATTGGAGGCTGTAGTACACAGAAGATGCCGTGCTCTTGCTGTGTAAATCCTCCATTAGCAACAAGAGATCA-GGAACTGCAAGCTGTGCATTTTTGAAGATAACCAGCAATAAGAACAGCCTTACTTAGATCGAAGGATGCTGGGATGGCACAGCAGTCAAATTATACCTTAGTACCATACAATATACTGTAGATTTCAGGATACTATGCGGTGTACCTAGCAAGCAGAGTCGCACTCTGCAGTGTTCTCAGTTGTGAGTGCCACAAGGTTGCGGGCAGAGTCCAATTACGATTGGCCGATTTGATTGCCATTCTACATCTAGAAGATGTCACAGTTGTTTCACATGGATCTCTTTCTCTGGTCCATTTCTTTGTCGTTTTTGGTACACATGAGCAGTCCATTTCTTCAGTTTGTCGCTGCATGTAGCCATGTAGATCGCGTGGGTAGTGACAGCAACGGCCAGAAAGGGAGATTTGAGATATTTTTCAGCTGTCTTGTAGAATTTGTAGGATCTCATGATAACCTTCAATAAAGAGTATTTCTTCCAT] [+] EMBL AK121008 [TCCCCTCCCGCGCCGGCCTCCCCCGCGGCGCTGCTCTGGCGGCGGCCGCGGCGGGTGGCTCCGACCACGTTCTGCTCCGCGCCGTCGCTCGGCCGCGTCGGGTGGCCGCGGCGGGAGGGTGCCGCCTGGCTGCTGTCGTTCCGCGCCGGCCCGGTTTCTTCCCCGTCGTCGGCGGCGGCGGGCGATCCTTCCCAGGCGCTCTCCGCGCTGCTCCCGCTCGTCGTCGCCGCCACCGCCGTCGCCGCGCTCGGCAACCCCGCTACCTTCTCATGGGTCTCCAAGGAGTACTACGCGCCTGCACTTGGCGGCATCATGCTCTCCATTGGCATCAAATTATCCATCGACGACTTCGCGTTGGCATTCAAGAGGCCGGTGCCTCTGACGATCGGCTATATGGCGCAGTACATTGTGAAGCCGCTGATGGGCGTGCTGATCGCGAGGGCCTTCGGGATGCCGTCGGCGTTCTTTGCAGGCTTTGTTCTTACTTGCTGCGTCTCCGGCGCGCAGCTGTCGAGCTATGCTAGCTTCCTGAGCAAAGGGGATGTTGCATTGAGCATTCTGTTGACAAGCTGCTCGACGATATCTTCGGTGGTTGTGACACCTGTTCTCACTGGACTGCTGATTGGTTCTGTGGTTCCTGTTGATGGGATCGCGATGGCGAAATCCATTTTGCAGGTGGTTCTTGTTCCTGTCACACTAGGTCTTCTTCTGAATACATATGCAAAAGCAGTCGTTAATGTCATTCAACCAGTAATGCCATTTGTTGCTATGTTGTGCACATCGCTTTGTATTGGAAGCCCTCTTGCTATCAACAGGAGCAAGATCTTATCTTCAGAAGGATTCCTGTTACTTCTCCCCATAGTGACTTTCCACATTGCTGCCTTCATTGTGGGTTACTGGATTTCCAAGTTGCCTATGTTGAGGCAAGAAGAGCCCGTTTGCAGAACTATTTCTGTATGTACCGGCATGCAGAGCTCCACCCTCGCTGGACTTCTTGCTACACAATTTCTTGGAAGTAGCCAGGCAGTTCCTGCAGCATGCTCAGTTGTTATCATGGCCATATTTGGTTTGACTCTAGCATCATACTGGGGAAATGGTTTGCGAATCAGAGATATCGGTTCGAGATTTGTTCCACAAGCTTCCGCAGGTGTGAGCTCATGATAAAGCTTTTGGGGTGCAGCATTTAGATTCGTTCATGGGCTCCCCCGTCAAGTTCCAGAATTCCTGAGCAATTGGAGGCTGTAGTACACAGAAGATGCCGTGCTCTTGCTGTGTAAATCCTCCATTAGCAACAAGAGATCA GGAACTGCAAGCTGTGCATTTTTGAAGATAACCAGCAATAAGAACAGCCTTACTTAGATCGAAGGATGCTGGGATGGCACAGCAGTCAAATTATACCTTAGTACCATACAATATACTGTAGATTTCAGGATACTATGCGGTGTACCTAGCAAGCAGAGTCGCACTCTGCAGTGTTCTCAGTTGTGAGTGCCACAAGGTTGCGGGCAGAGTCCAATTACGATTGGCCGATTTGATTGCCATTCTACATCTAGAAGATGTCACAGTTGTTTCACATGGATCTCTTTCTCTGGTCCATTTCTTTGTCGTTTTTGGTACACATGAGCAGTCCATTTCTTCAGTTTGTCGCTGCATGTAGCCATGTAGATCGCGTGGGTAGTGACAGCAACGGCCAGAAAGGGAGATTTGAGATATTTTTCAGCTGTCTTGTAGAATTTGTAGGATCTCATGATAACCTTCAATAAAGAGTATTTCTTCCAT] [+] EMBL CA753073 [ CCCAGGCGCTCTCCGCGCTGCTCCCGCTCGTCGTCGCCGCCACCGCCGTCGCCGCGCTCGGCAACCCCGCTACCTTCTCATGGGTCTCCAAGGAGTACTACGCGCCTGCACTTGGCGGCATCATGCTCTCCATTGGCATCAAATTATCCATCGACGACTTCGCGTTGGCATGCAAGAGGCCGGTGCCTCTGACGATCGGCTATATGGCGCAGTACATTGTGAAGCCGCTGATGGGCGTGCTGATCGCGAGGGCCTTCGGGATGCCGTCGGCGTTCTTTGCAGGCTTTGTTCTTACTTGCTGCGTCTCCGGCGCGCAGCTGTCGAGCTATGCTAGCTTCCTGAGCAAAGGGGATGTTGCATTGAGCATTCTGTTGACAAGCTGCTCGACGATATCTTCGGTGGTTGTGACACCTGTTCTCACTGGACTGCTGATTGGTTCTGTGGTTCCTGTNGATGGGATCGCGATGGCGANATCCATNTTGCAGGTGGTTCTTGTNCCTGTCACACTAGGTCTTCTTCTGAATACATATGCAAAAGCAGTCGTNAATGTCATNC ACCAGTAATGCCATNNGTNGCTATGTAGTGCACATCGCTNTGTATTGGAAGCCCTC TGCTAT AACAGGAGCAGAATC TATC TCAG AGGA TNCTG TAC TCT CCCATAGT ACNTTCC CA TGCTGCC TCATg ] [+] EMBL CA753302 [ GTCGTTAATGTCATTCAACCAGTAATGCCATTTGTTGCTATGTTGTGCACATCGCTTTGTATTGGAAGCCCTCTTGCTATCAACAGGAGCAAGATCTTATCTTCAGAAGGATTCCTGTTACTTCTCCCCATAGTGACTTTCCACATTGCTGCCTTCATTGTGGGTTACTGGATTTCCAAGTTGCCTATGTTGAGGCAAGAAGAGCCCGTTTGCAGAACTATTTCTGTATGTACCGGCATGCAGAGCTCCACCCTCGCTGGACTTCTTGCTACACAATTTCTTGGAAGTAGCCAGGCAGTTCCTGCAGCATGCTCAGTTGTTATCATGGCCATATTTGGTTTGACTCTAGCATCATACTGGGGAAATGGTTTGCGAATCAGAGATATCGGTTCGAGATTTGTTCCACAAGCTTCCGCAGGTGTTAGCTCATGATAAAGCTTTTGGGGTGCAGCATATAGATTCGTTCATGGGCTCCCCCGTCAAGTTCCAGAATTCCTGAGCAATTGGAGGCTGTAGTACACAGAAGATGCCGTGCTCTTGCTGTGTAAATCCTCCATTAGCAACAA AGATCACGAAACTGC AGCTGTGCA TTTTGAAGATAA CAGCAATAAGAACAGCCCTAC TAGATCG AGGATGCTGGGATGGC CAGCAGT AATTATAC TAGTcc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||