Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 413 cluster # 413       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_413#0 length = 1223 sequences # 2  

consensusID : consensus_413#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1223
fasta sequence
                              [CTTCTCCCATCCGCTTCCTTCTCCTCCTCCCCCGCCCATGGCGTCCTCGGCGGTGGCGAGCCGCAAGCGCGCGGCGCCCTACGATCTGGAGCCCCGTGCCTGCTGCGGATCCTCCCCGGCGAGCGGGCCGAAGCGGCGGCGGTACAACTTCGGGAGCGCCGATGACTACGAGCGCCTCGACGTGGTCGGCCAGGGCGGGTTCGGCGTGGTGCTCAGGGCGCGGGATCGCCGCACCGGCAAGGTCGTCGCGCTCAAGCGCCTCATCGGGGCGGACGAGGGCGGCCGCTTCGCCCCCGACTTCGACGCGCTCAGGGTGGAGGCCGCCTGCCAGCACGCCTGCCGCGGCCACCCCAACATCGTCCAGATCAAGGACGTCGTCGCCGACGCCAAGACAGGTGACCTCTTCCTCGTCCTCGAGTTCGTCGGAAGCAGCCTCCGGGATGAGTTCCCCAGGGCCCACCCGGAGGACATCGTCCGCGCCATGATGCGGCCGCTCGTCGACGCCGCCAAGAAGATGCACGCCTCGCGCGTCATCCATCGGGACATCAAGCCGGAGAACATCCTTGTCAGCTTCTCCGGGCAGCTCAAGATCTGTGATTTCGGGGCCGCCACGCTGATGAAGCCCGCCGGGAAGCCGTACGACCTGTGCCGCCCCGGCACGCTGCCGTACACCTCGCCGGAGCAGCTGGCCGGCAACCGGTGCTACGGCCCCGCGGTGGACATGTGGGCGTTAGGATGCATCATGGGCGAGCTCCTCACCGGCGCGCCGCTCTTCGGAGGCGACATGACTGAGGAGGAGCTGCTCGCCGACCTGTCCGCCAACCTGGACGACCAGCTCAACGAGCTCTTCTATGATGTCCTGCCGGAGCTGTCGCCGGCGGCGCGCGAGGTCCTGTCCGGGCTGCTGGCGTTCGACCCAGAGAAGAGGCTGACGGCGTCGGAGGCGCTGGAGCACCGGTGGTTCGCCGAGGAGCCCAAGAAAGCAGAGTTCCCTGGCTTCGTGCCTCTCTTCGGTTAGTCTGTCAGTGTAGAGTGTTGGTTTCAGATTGTCAGTCTGCATGTAACTTACTAGAACTGTTAGTCTGCAGTCTTGTCTTTAAATTAGAACTGATGATTGGTAGTCTTGTTTAGGACTGATGATTGCATTAGCAAATCGGCATTGCAATCAGTGTAATCTTTTTATTCCGATTTATTCATAGTATGCATATTTATGTAATCTTATT]

[+] EMBL AK108455             [CTTCTCCCATCCGCTTCCTTCTCCTCCTCCCCCGCCCATGGCGTCCTCGGCGGTGGCGAGCCGCAAGCGCGCGGCGCCCTACGATCTGGAGCCCCGTGCCTGCTGCGGATCCTCCCCGGCGAGCGGGCCGAAGCGGCGGCGGTACAACTTCGGGAGCGCCGATGACTACGAGCGCCTCGACGTGGTCGGCCAGGGCGGGTTCGGCGTGGTGCTCAGGGCGCGGGATCGCCGCACCGGCAAGGTCGTCGCGCTCAAGCGCCTCATCGGGGCGGACGAGGGCGGCCGCTTCGCCCCCGACTTCGACGCGCTCAGGGTGGAGGCCGCCTGCCAGCACGCCTGCCGCGGCCACCCCAACATCGTCCAGATCAAGGACGTCGTCGCCGACGCCAAGACAGGTGACCTCTTCCTCGTCCTCGAGTTCGTCGGAAGCAGCCTCCGGGATGAGTTCCCCAGGGCCCACCCGGAGGACATCGTCCGCGCCATGATGCGGCCGCTCGTCGACGCCGCCAAGAAGATGCACGCCTCGCGCGTCATCCATCGGGACATCAAGCCGGAGAACATCCTTGTCAGCTTCTCCGGGCAGCTCAAGATCTGTGATTTCGGGGCCGCCACGCTGATGAAGCCCGCCGGGAAGCCGTACGACCTGTGCCGCCCCGGCACGCTGCCGTACACCTCGCCGGAGCAGCTGGCCGGCAACCGGTGCTACGGCCCCGCGGTGGACATGTGGGCGTTAGGATGCATCATGGGCGAGCTCCTCACCGGCGCGCCGCTCTTCGGAGGCGACATGACTGAGGAGGAGCTGCTCGCCGACCTGTCCGCCAACCTGGACGACCAGCTCAACGAGCTCTTCTATGATGTCCTGCCGGAGCTGTCGCCGGCGGCGCGCGAGGTCCTGTCCGGGCTGCTGGCGTTCGACCCAGAGAAGAGGCTGACGGCGTCGGAGGCGCTGGAGCACCGGTGGTTCGCCGAGGAGCCCAAGAAAGCAGAGTTCCCTGGCTTCGTGCCTCTCTTCGGTTAGTCTGTCAGTGTAGAGTGTTGGTTTCAGATTGTCAGTCTGCATGTAACTTACTAGAACTGTTAGTCTGCAGTCTTGTCTTTAAATTAGAACTGATGATTGGTAGTCTTGTTTAGGACTGATGATTGCATTAGCAAATCGGCATTGCAATCAGTGTAATCTTTTTATTCCGATTTATTCATAGTATGCATATTTATGTAATCTTATT]
[+] EMBL AA750870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACATCAAGCCGGAGAACATCCTTGTCAGCTTCTCCGGGGAGCTCAAGATCTGTGACTTCGGCGCCGCCACGCTGATGAAGCCCGCC GGAAGCCGTACGACCTGTGCCGCCCCGGCCAGCTGCCGTACACCTCGCCAGAGCAGCTCGCCGGCAACCGATGCTACGGCCCCGCGGTGGACATGTGGGCGTTGGGGTGCATCATGGGCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_413#0 CTTCTCCCATCCGCTTCCTTCTCCTCCTCCCCCGCCCATGGCGTCCTCGGCGGTGGCGAG CCGCAAGCGCGCGGCGCCCTACGATCTGGAGCCCCGTGCCTGCTGCGGATCCTCCCCGGC GAGCGGGCCGAAGCGGCGGCGGTACAACTTCGGGAGCGCCGATGACTACGAGCGCCTCGA CGTGGTCGGCCAGGGCGGGTTCGGCGTGGTGCTCAGGGCGCGGGATCGCCGCACCGGCAA GGTCGTCGCGCTCAAGCGCCTCATCGGGGCGGACGAGGGCGGCCGCTTCGCCCCCGACTT CGACGCGCTCAGGGTGGAGGCCGCCTGCCAGCACGCCTGCCGCGGCCACCCCAACATCGT CCAGATCAAGGACGTCGTCGCCGACGCCAAGACAGGTGACCTCTTCCTCGTCCTCGAGTT CGTCGGAAGCAGCCTCCGGGATGAGTTCCCCAGGGCCCACCCGGAGGACATCGTCCGCGC CATGATGCGGCCGCTCGTCGACGCCGCCAAGAAGATGCACGCCTCGCGCGTCATCCATCG GGACATCAAGCCGGAGAACATCCTTGTCAGCTTCTCCGGGCAGCTCAAGATCTGTGATTT CGGGGCCGCCACGCTGATGAAGCCCGCCGGGAAGCCGTACGACCTGTGCCGCCCCGGCAC GCTGCCGTACACCTCGCCGGAGCAGCTGGCCGGCAACCGGTGCTACGGCCCCGCGGTGGA CATGTGGGCGTTAGGATGCATCATGGGCGAGCTCCTCACCGGCGCGCCGCTCTTCGGAGG CGACATGACTGAGGAGGAGCTGCTCGCCGACCTGTCCGCCAACCTGGACGACCAGCTCAA CGAGCTCTTCTATGATGTCCTGCCGGAGCTGTCGCCGGCGGCGCGCGAGGTCCTGTCCGG GCTGCTGGCGTTCGACCCAGAGAAGAGGCTGACGGCGTCGGAGGCGCTGGAGCACCGGTG GTTCGCCGAGGAGCCCAAGAAAGCAGAGTTCCCTGGCTTCGTGCCTCTCTTCGGTTAGTC TGTCAGTGTAGAGTGTTGGTTTCAGATTGTCAGTCTGCATGTAACTTACTAGAACTGTTA GTCTGCAGTCTTGTCTTTAAATTAGAACTGATGATTGGTAGTCTTGTTTAGGACTGATGA TTGCATTAGCAAATCGGCATTGCAATCAGTGTAATCTTTTTATTCCGATTTATTCATAGT ATGCATATTTATGTAATCTTATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)