These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4134#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2246 fasta sequence [TCTTCCTGCCTCGCGAGGTCTCGTGGTCGGGGGGTGGGGGGTTTGAATTCCGTTTCCAGATCTGCGCGTGCTTGGAGCTTTTCGTGCGGTTCTTCTTCTTTTTTTTGATCGGGATTTGGGAGGGAGGCCCGTTATCCAGGCCCAATTTGTCACCGATTTCTCCTCGCGAATCCACTGCTGCTTGCTGCTGTGCTGGCTACATTGTTGTTGTTGTTGGGTTAGGGATTCTTTGTCGGGGGGAAGCGCGGCCTGCCTGGAAATCGTCGGAGCTCGCTGAGATGTCGAGTTTTTGCGCATGAATTTCACCGTAGGGGGGGGGGGGGGGATGGGAGATCCGGAGAGAGGGCAACTTTTGATTCGTTCGTTTTGGGGGAGATATGTGATGTTGGACTTGGTGCGCTTAGATAATTGAATCTGAATATGTGCTTTGTGTAGTCGTGCGGAGAAATTTATCTTTCTTTGTCCAAAGAAAGCTCTACCACTAGCTACCTCTTCAGATAGGTTCTTGCAACTTTATAGTACTAGCTTAGCATCTTAAACTAGCCTCTTGCCGCTGTTTAGCTAACTAGGTGAGCTTGATTTTCAAGTCCTGTGTAACTGTGTCCCGCCAACTCAAGCAATACATAGGTTGTTAATTACTTCCTTCTCACCGATTATTTTGAGTTCGTGCCTACGAAGAACAAGAATGGGTTGGCTTGCATTGCATGAGGATAATAAGGAAGATATGACTCTTAAACTTATCTGGAGTTGCTGAAATCACTCCTAGTAGGGAGTAAAGTTACCAACTAAGTTTGCACGAGTCATTCTGGTCCAATTAAATTTGCATGTGATACCCCTTCTTTTCTTGAAATTTGTCGGGAAAACAACGTAGCACATGGTTCTGCTCATGAAGTTTGCACTTTCGGTGGCAAATAAAATTTAATTTAAATTGTGTACTTTAAGCATTTTTACTGAGGAGTGAGAAGATATGTTCCCCATTCTAAGTTTCCATAATATTCCTGGATGACATTTATAGTTTTGTTATTTCATCTGTGCCCCAGTTACTATAACCTGGTTTGCTAATTTGTTATCAAGAAATCATGTTGTCTTTCTTTTATCTTCCTGTTTTGTTAAATAGGCCACTGTAGTGATACTGGTTTGTTATTGTCCGTGTATAAGTCACTTTCGAGTTTTTTTTTTGGCCAAATGATTGTTATACTGACTTCTGCTGTTACCATGTTACTATTTGACAGATTTTGTGAGTTCTAGCTACTAGCCAAGAAGCATGACTGAGGAAACTGGCAACGACTTCCAGATGGTTCAAGGTTATGAGATTGTCCCAAGCAATGAGGAAGCTCATGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTAGCTCAAGGTGACGAGGTCCAAGTAAATGGATTGGTCAGTGCTGAGATGAGTACCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGTAAGCAAACTTTTGCTTACAGCTCTGGTTCAAAAATTGCGGGTACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCTATAATTAAGAACCAAGAGCACAAGCTAGCACTGACTCCAGCTGTAGGGACTGACAATGATGGCGAGGGCACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAATGCTGCTTTTGATCAAGACCGCAGTTGTTCATATCTGGCGAAGATGATCATTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGGGGGAGGTGTATGCTGTTTACCAGAAAGAAAAGGAAAACCTCATGCAAGCATTCAGCACTATGCCTGGAAGGATCAGCCTCACCATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGACTCTGAGTGGAAGATACATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTGCAAGCCTTTCGGACTGGAATATGAAGGACAAACTGTTCACCATCACATTGGACAATGATTGCTCATCACA-TGATATATACAGTGCAAATCTGAGGGATTATCTCTCCAACAAGA] [+] EMBL AK121128 [TCTTCCTGCCTCGCGAGGTCTCGTGGTCGGGGGGTGGGGGGTTTGAATTCCGTTTCCAGATCTGCGCGTGCTTGGAGCTTTTCGTGCGGTTCTTCTTCTTTTTTTTGATCGGGATTTGGGAGGGAGGCCCGTTATCCAGGCCCAATTTGTCACCGATTTCTCCTCGCGAATCCACTGCTGCTTGCTGCTGTGCTGGCTACATTGTTGTTGTTGTTGGGTTAGGGATTCTTTGTCGGGGGGAAGCGCGGCCTGCCTGGAAATCGTCGGAGCTCGCTGAGATGTCGAGTTTTTGCGCATGAATTTCACCGTAGGGGGGGGGGGGGGGATGGGAGATCCGGAGAGAGGGCAACTTTTGATTCGTTCGTTTTGGGGGAGATATGTGATGTTGGACTTGGTGCGCTTAGATAATTGAATCTGAATATGTGCTTTGTGTAGTCGTGCGGAGAAATTTATCTTTCTTTGTCCAAAGAAAGCTCTACCACTAGCTACCTCTTCAGATAGGTTCTTGCAACTTTATAGTACTAGCTTAGCATCTTAAACTAGCCTCTTGCCGCTGTTTAGCTAACTAGGTGAGCTTGATTTTCAAGTCCTGTGTAACTGTGTCCCGCCAACTCAAGCAATACATAGGTTGTTAATTACTTCCTTCTCACCGATTATTTTGAGTTCGTGCCTACGAAGAACAAGAATGGGTTGGCTTGCATTGCATGAGGATAATAAGGAAGATATGACTCTTAAACTTATCTGGAGTTGCTGAAATCACTCCTAGTAGGGAGTAAAGTTACCAACTAAGTTTGCACGAGTCATTCTGGTCCAATTAAATTTGCATGTGATACCCCTTCTTTTCTTGAAATTTGTCGGGAAAACAACGTAGCACATGGTTCTGCTCATGAAGTTTGCACTTTCGGTGGCAAATAAAATTTAATTTAAATTGTGTACTTTAAGCATTTTTACTGAGGAGTGAGAAGATATGTTCCCCATTCTAAGTTTCCATAATATTCCTGGATGACATTTATAGTTTTGTTATTTCATCTGTGCCCCAGTTACTATAACCTGGTTTGCTAATTTGTTATCAAGAAATCATGTTGTCTTTCTTTTATCTTCCTGTTTTGTTAAATAGGCCACTGTAGTGATACTGGTTTGTTATTGTCCGTGTATAAGTCACTTTCGAGTTTTTTTTTTGGCCAAATGATTGTTATACTGACTTCTGCTGTTACCATGTTACTATTTGACAGATTTTGTGAGTTCTAGCTACTAGCCAAGAAGCATGACTGAGGAAACTGGCAACGACTTCCAGATGGTTCAAGGTTATGAGATTGTCCCAAGCAATGAGGAAGCTCATGCTGAGGAAGTTCAGGGTGATGAATTGGTCCTTGCGGAGGACTTAGCTCAAGGTGACGAGGTCCAAGTAAATGGATTGGTCAGTGCTGAGATGAGTACCCCTCCAACATCAAGGCGCCGTAGGAAGAAGTCTCTAGTGTGGGAGCACTTCACTATTGAAGCTGTCTCTGGAGGGGCTACACGGGCGTGCTGCAAACTGTGTAAGCAAACTTTTGCTTACAGCTCTGGTTCAAAAATTGCGGGTACTAGCCATCTCAAGAGGCACATTACCTTGGGTTCATGTCCTATAATTAAGAACCAAGAGCACAAGCTAGCACTGACTCCAGCTGTAGGGACTGACAATGATGGCGAGGGCACTGTGGAGCGCCCGTCTAAGAGGCGTTACAGATATACTGGTTATGCAAATGCTGCTTTTGATCAAGACCGCAGTTGTTCATATCTGGCGAAGATGATCATTTTGCATGACTATCCACTTCACATTGTTCAACAGCCAGCCTTCACTACCTTTATTGACAGTCTGCAGCCACGTTTCAGGGTTGTAGATGTTGAGACAATGGAGGGGGAGGTGTATGCTGTTTACCAGAAAGAAAAGGAAAACCTCATGCAAGCATTCAGCACTATGCCTGGAAGGATTAGCCTCACTATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGACTCTGAGTGGAAGATACATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTACAAGCCTTTCAGACTGGAATATGAAGGACAAACTATTCACCATCACATTGGACAATGATTGCTCATCACA TGATATATATAGTGCGAATCTGAGGGATTATCTCTCCAACAAG ] [-] EMBL CF568772 [ AGGGTTGTAGATGTTGAGACAATGAAGGGGAAGGTGTATGCTGTTTACCAGAAAGAAAAGGAAACCCTCACGCAAGCATTCAGCACTATGCCT GAAGGATCAGCCTCACCATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTGCTGGGCAGTTTATTGACTCTGAGTGGAAGATACATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTGCAAGCCTTTCGGACTGGAATATGAAGGACAAACTGTTCACCATCACATTGGACAATGATTGCTCATCACA TGATATATACAGTGCAAATCTGAGGGATTATCTCTCCAACAAGA] [+] EMBL OSC100171 [ GCAAGCATTCAGCACTATGCCTGGAAGGATCAGCCTCACCATTGGATTGTGGACAACTAGCCAAACTCTTGGCTATGTTTCACTTTCTGGGCAGTTTATTGACTCTGAGTGGAAGATACATCGAAGAATGCTAAACTTCATGATGGTGTCTTCTCCTCATTCAGAGAATGCACTTAGTGAAGCTATTAGTGCAAGCCTTTCGGACTGGAATATGAAGGNCAAACTGTTCACCATCACATTGGACAATGATTGCTCATCACATTGATATATACAGTGCAAATCTGAGGGATTATCTCTCCAACAAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||