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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 5142 fasta sequence
[AAAAGGAGGAGAGGATTGTAAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCACGCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTTGATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAATCACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGGCTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGCGGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTCGCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGAGGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCTTCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAAAGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTACTACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCATCTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGAAGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAACAGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACAGCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTATCCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAACAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTTTGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGAAATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAAACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGAGCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCGTAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAAAAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGGAGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAATCCTTTAGCAGCAAAGACTGTAAGCAAAGTATTGAGAAGGAGCTTTGACGTTGATTACTGGAGGAGAATTCTGCATACCGGTGAATGGAAGTACAAAAATGATGAGAATGATATCATGCCGGCCTTGATGATCAGCTACAAATATCTTCCAGCTCACCTTCAAAGTTGTTTCTCGTACTGTGCTGTGTTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCGATATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATTGGGGATTTTTCGAAAAACAGTTTGAGCACTCAACCTTACTCATCATGCATGATCTAATTCATGATCTGGCACAGAAGGTTTCATCTGACGAAAGCTTTACCATAGAGGGCAATGAGCCTAGGAATGCACCGCCATGTGTTCGTCATGTCAGTGTAATAACAGAGTGGGAGTACAAAACAAAATTGAATGGCACTGTGTATCCTAATGATTCTTTCCTCCAAGAGTTCTCTAATTCCTTCCGTGAGTTGCAACAAAGGAGCTTAAGCACATTGATGCTGTTTGGGCCACATGACTTGGATTTTGCAGACACGTTTCGGCAAGAACTCAATGAGGTAAGGTCAATCCGTGTGTTGAAACTGGAGATGGTCTTCTTTGACTTGGATTCATTGATAGGCAACATCTCAGCATTTGTCAATCTTCGCTATCTAGAACTGGGCTGCTTCTACAAGGGCCCCAGGCTGGAGCTACCAGAAGCTATATGCAGGCTGTATCACCTTAAAGTCCTGGATATAAAGAAGAACTGGGGTCCTAGCACATCTTTGCCAAGAGAAATGAGCAAGCTTGTTAACTTGCGGCATTTTATTGCTGAAAAGGAGTTACATGCAAAAATAGCTGGCATCGGAAAGATGGTTTCCCTGCAGGAGCTAAAGGCATTTGATGTCAAAAAGGACCATGAGTTCAGCATATCACAGCTGAGAGGACTGAATCAGCTAAGGGGATCAATAAGCATTTCTAGTCTTTACAATGCAGGGCATGAAGAGGCTAGCCAAGCAAGGCTCTGTGACAAGGATAACCTAACTTGTTTGCACCTGTCATGGCTGACTTTATCTAGGAACCGTGTTGCACGGCGTACTCTTCCTATCCTGGAGGATCTTAAACCACATTCTGGCCTTAAAAATCTGCAAGTTGTTGGATACAGGCATTCTTTACCATCATGGCTTTGCAGCACTGTCAATCTCACCTCTTTGCGGTCACTCCACCTGGATAGATGCATACGTTGGCAAACAATTCCACATCCCCAGCAGTTGCCTCTTCTCCAGGAGCTGCATTTGATTCAACTGCCTCGTGTTTACAAAATAGAGATTGGTCCTCTGAAGGTCCTTGAAATACGCTGGTTGCAAAATCTGAGGCAGTGCATACTTTTAGATAAGGAACAGTCATATGCTACCCTACAGATCCTTGAAGTGGAGGGATGCCCCAAATTGGATGAATTTCTATTGCAGATTTTCATGTCTTCGGGTGTACAAAGCACATACCAATTTCTTGGTATTCACAGGCTTAAGATACACAATGACTTCCTTCGTGCTAGCATCCCGCTCCTGCTCCTAAATTCTTTATCAGACATAGATCTGTGTGGTGAGCACTCAAAATTTACGAGGTTTCGACTAAAACCATTTGGCACATCAGATGGGTTGAGTCTACAAATCAAAGGAGATAGATATATTCAGAAGATAGAGGAAAGATTGTTCACATTAGAGAAACTCAAGGATCTGCGGGAACTTGAAATCCGGGACTATCAATCAGTGATATTCCAACGTCAATTCTGGGAAGGCTTCGAACAGTTGACATCATTGAAAAAGTTTAGAGTGATCAAGTGCCCAGAAATATTTTCTACCAACTTTGAGCTATTTCTGCCTCCGTCAGTTGAGGAACTTGAGTTGAGTGGATGCAACATTACATTGATACAACTATCACAACTCCTCGTGAACCTTCATTTACTTAAGAGTTTCAAGTTAACTAATTGCCAAGGGGTAACATCCTTACCTGTAGGGTTGTTTACAGATGAACAGAACACAATGTCAGAAGGCTCATGGCACATTCCTCCCAGATGCTTCACGAGTCTGGAAAGTTTGCAAATCTCTTTCACAACAGCTCCATCTGATGCAAATTCAATTATGCACTTTACGAGCAAGAAAGGCCTAGGAAGATTTGTATCTCTTAAGAAAATTGTTATAGAAAATTGCCCTACTCTGCTATCTAGAGCGCTTTCAGGAGGAGCATCTCATATATCTCCATCATCTTTGGATAAACTCTGCATGACTGGTATCCAAGACAGCACTCTGCAGTTCTCAGATGTCTCTTCCATCGCGGATTTAGATGTGTCTGGATGCCCGAAGTTGGCATGTCTCGACCTGAGTTCTTGTACCGCGCTAGAAAAGTTGTGTGTTATAGATTGCCGTTTGTTACAGTCAATTGAAGGTTTGCCGTCATGCTCAGCACTGAGGGATTTGAAAATTCGAAACTGTGCATTGCTGCCTTCGCTCAGCGCATCACTCCACACCCTGAAAACACTGAGCATAGAGAATAACACAAATCTAGCATCTCTGGAACTGAAATCATGCACATCATTGCAGAAACTATGCATCAAAGACTGCCCGGCACTGACATCATGGGAAGGTTTGAAATCCCTTGTTTCTCTTGAGATCTTGAAAGTTGAAGCGTCTCCTGGGTTCATAACGAGATGGATATCAGCAGCAGCTGAAGTTAATATCGAGGAGAAGAATTTCTCACTACCACTTGAAAAGCTCAACGTTGATAACATTGATGTCCTTTGTGTGCCCATATGCAGCCAGTTAACTTCTCTCAAGATATTATCCATTGAAGAGGATCGTCACGATCCAGATGGTCATGTGGAGTTTTTGACAGACAACCATGTCAAAGGACTGTCATTTCTCACCTGCTTGAGATTTCTTGATCTGGAAAACCTTGAGCAACTCCGGTCACTGCCTGCAGAACTTGGATCCCTTGCATCCCTGCAGAGACTACATGTTGGCAACTGTGGACATATTACTTCCCTGCCGGTAGGGGGTCTCCCAGCTTCGCTCAAGGACATGGAACTCTATAATTGCAGCAAAGAACTAAACGTACTGTGCCGAGATATGCTTAGACTTCGAAGAAACTTACATTTGTGGGTGGATGGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTGAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAATATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTAAATAATGGAATTTTACACGGACATCTACCACTTTATTCATGCCAACCATTTAACAAAGGGTTAATT]
[+] EMBL AK121298 [AAAAGGAGGAGAGGATTGTAAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCACGCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTTGATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAATCACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGGCTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGCGGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTCGCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGAGGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCTTCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAAAGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTACTACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCATCTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGAAGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAACAGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACAGCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTATCCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAACAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTTTGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGAAATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAAACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGAGCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCGTAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAAAAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGGAGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAATCCTTTAGCAGCAAAGACTGTAAGCAAAGTATTGAGAAGGAGCTTTGACGTTGATTACTGGAGGAGAATTCTGCATACCGGTGAATGGAAGTACAAAAATGATGAGAATGATATCATGCCGGCCTTGATGATCAGCTACAAATATCTTCCAGCTCACCTTCAAAGTTGTTTCTCGTACTGTGCTGTGTTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCGATATGTGGATAGCGCAAGATTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGATGATCTACTTGATTGGGGATTTTTCGAAAAACAGTTTGAGCACTCAACCTTACTCATCATGCATGATCTAATTCATGATCTGGCACAGAAGGTTTCATCTGACGAAAGCTTTACCATAGAGGGCAATGAGCCTAGGAATGCACCGCCATGTGTTCGTCATGTCAGTGTAATAACAGAGTGGGAGTACAAAACAAAATTGAATGGCACTGTGTATCCTAATGATTCTTTCCTCCAAGAGTTCTCTAATTCCTTCCGTGAGTTGCAACAAAGGAGCTTAAGCACATTGATGCTGTTTGGGCCACATGACTTGGATTTTGCAGACACGTTTCGGCAAGAACTCAATGAGGTAAGGTCAATCCGTGTGTTGAAACTGGAGATGGTCTTCTTTGACTTGGATTCATTGATAGGCAACATCTCAGCATTTGTCAATCTTCGCTATCTAGAACTGGGCTGCTTCTACAAGGGCCCCAGGCTGGAGCTACCAGAAGCTATATGCAGGCTGTATCACCTTAAAGTCCTGGATATAAAGAAGAACTGGGGTCCTAGCACATCTTTGCCAAGAGAAATGAGCAAGCTTGTTAACTTGCGGCATTTTATTGCTGAAAAGGAGTTACATGCAAAAATAGCTGGCATCGGAAAGATGGTTTCCCTGCAGGAGCTAAAGGCATTTGATGTCAAAAAGGACCATGAGTTCAGCATATCACAGCTGAGAGGACTGAATCAGCTAAGGGGATCAATAAGCATTTCTAGTCTTTACAATGCAGGGCATGAAGAGGCTAGCCAAGCAAGGCTCTGTGACAAGGATAACCTAACTTGTTTGCACCTGTCATGGCTGACTTTATCTAGGAACCGTGTTGCACGGCGTACTCTTCCTATCCTGGAGGATCTTAAACCACATTCTGGCCTTAAAAATCTGCAAGTTGTTGGATACAGGCATTCTTTACCATCATGGCTTTGCAGCACTGTCAATCTCACCTCTTTGCGGTCACTCCACCTGGATAGATGCATACGTTGGCAAACAATTCCACATCCCCAGCAGTTGCCTCTTCTCCAGGAGCTGCATTTGATTCAACTGCCTCGTGTTTACAAAATAGAGATTGGTCCTCTGAAGGTCCTTGAAATACGCTGGTTGCAAAATCTGAGGCAGTGCATACTTTTAGATAAGGAACAGTCATATGCTACCCTACAGATCCTTGAAGTGGAGGGATGCCCCAAATTGGATGAATTTCTATTGCAGATTTTCATGTCTTCGGGTGTACAAAGCACATACCAATTTCTTGGTATTCACAGGCTTAAGATACACAATGACTTCCTTCGTGCTAGCATCCCGCTCCTGCTCCTAAATTCTTTATCAGACATAGATCTGTGTGGTGAGCACTCAAAATTTACGAGGTTTCGACTAAAACCATTTGGCACATCAGATGGGTTGAGTCTACAAATCAAAGGAGATAGATATATTCAGAAGATAGAGGAAAGATTGTTCACATTAGAGAAACTCAAGGATCTGCGGGAACTTGAAATCCGGGACTATCAATCAGTGATATTCCAACGTCAATTCTGGGAAGGCTTCGAACAGTTGACATCATTGAAAAAGTTTAGAGTGATCAAGTGCCCAGAAATATTTTCTACCAACTTTGAGCTATTTCTGCCTCCGTCAGTTGAGGAACTTGAGTTGAGTGGATGCAACATTACATTGATACAACTATCACAACTCCTCGTGAACCTTCATTTACTTAAGAGTTTCAAGTTAACTAATTGCCAAGGGGTAACATCCTTACCTGTAGGGTTGTTTACAGATGAACAGAACACAATGTCAGAAGGCTCATGGCACATTCCTCCCAGATGCTTCACGAGTCTGGAAAGTTTGCAAATCTCTTTCACAACAGCTCCATCTGATGCAAATTCAATTATGCACTTTACGAGCAAGAAAGGCCTAGGAAGATTTGTATCTCTTAAGAAAATTGTTATAGAAAATTGCCCTACTCTGCTATCTAGAGCGCTTTCAGGAGGAGCATCTCATATATCTCCATCATCTTTGGATAAACTCTGCATGACTGGTATCCAAGACAGCACTCTGCAGTTCTCAGATGTCTCTTCCATCGCGGATTTAGATGTGTCTGGATGCCCGAAGTTGGCATGTCTCGACCTGAGTTCTTGTACCGCGCTAGAAAAGTTGTGTGTTATAGATTGCCGTTTGTTACAGTCAATTGAAGGTTTGCCGTCATGCTCAGCACTGAGGGATTTGAAAATTCGAAACTGTGCATTGCTGCCTTCGCTCAGCGCATCACTCCACACCCTGAAAACACTGAGCATAGAGAATAACACAAATCTAGCATCTCTGGAACTGAAATCATGCACATCATTGCAGAAACTATGCATCAAAGACTGCCCGGCACTGACATCATGGGAAGGTTTGAAATCCCTTGTTTCTCTTGAGATCTTGAAAGTTGAAGCGTCTCCTGGGTTCATAACGAGATGGATATCAGCAGCAGCTGAAGTTAATATCGAGGAGAAGAATTTCTCACTACCACTTGAAAAGCTCAACGTTGATAACATTGATGTCCTTTGTGTGCCCATATGCAGCCAGTTAACTTCTCTCAAGATATTATCCATTGAAGAGGATCGTCACGATCCAGATGGTCATGTGGAGTTTTTGACAGACAACCATGTCAAAGGACTGTCATTTCTCACCTGCTTGAGATTTCTTGATCTGGAAAACCTTGAGCAACTCCGGTCACTGCCTGCAGAACTTGGATCCCTTGCATCCCTGCAGAGACTACATGTTGGCAACTGTGGACATATTACTTCCCTGCCGGTAGGGGGTCTCCCAGCTTCGCTCAAGGACATGGAACTCTATAATTGCAGCAAAGAACTAAACGTACTGTGCCGAGATATGCTTAGACTTCGAAGAAACTTACATTTGTGGGTGGATGGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTGAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAATATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTAAATAATGGAATTTTACACGGACATCTACCACTTTATTCATGCCAACCATTTAACAAAGGGTTAATT]
[+] EMBL AF456244 [ AAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCACGCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTTGATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAATCACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGGCTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGCGGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTCGCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGAGGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCTTCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAAAGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTACTACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCATCTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGAAGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAACAGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACAGCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTATCCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAACAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTTTGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGAAATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAAACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGAGCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCGTAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAAAAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGGAGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAACCC ]
consensusID : consensus_4152#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence
[ACCCTCTTAAGGGAATAGCTTGCGGCCGCTCTAACATCAGAATGGTGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTTAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAAAATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAGGGGCCGCTCCACCATCAAACTG]
[+] EMBL BI306385 [ACCCTCTTAAGGGAATAGCTTGCGGCCGCTCTAACATCAGAATGGTGCGACGAGGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTTAGCTTATGTTCGCATATCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTCTATTTTCGATGAAGGGAGCAAAAGAAACAAAAAATCAAAATACAAGAGAAGAAAAAAGGCTACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACAAGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAGACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTAAGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGAGGGGCCGCTCCACCATCAAACTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4152#0 AAAAGGAGGAGAGGATTGTAAGTTTGCAACCAGCAGAGCTTTGCCCCGGGGCGTCGGCAC 60
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GCACTGCCACCTCGCCCTCGAGGCCTCGACGGCGCCACAGTGCCACACCCATTCTCTGTT 120
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GATCCCTAGCTGTAGTTGTAGCTGGCAGATGGACAAGGCGGCGGTTGTTCCACTTCCAAT 180
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CACCGGAGGAGTCAACGACGATCGTACTGCTGCGCTGCAGCAGTGGGCTTCCACCGTCGG 240
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CTTCGGAGGCGAGGTGGGGCGCCTCGTCGAAGCCCACCGACGCCTCGACTCGGTGCTCGC 300
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGAGACGCAGGGGAAGGAGATCCGGAACAAGGAGCTCCAGCGGCGCCTCAGGGAGGCCTC 360
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GCATGATGCTGCCCGCGCCCGTGACCTCCTCGGCGAGCTCGAGTACTACCGCATCCGCGA 420
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGAGGTGGAGCGCGACGACCACGATAAGCTATTGCATGACAATGCAAATGGAAATTTGCT 480
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TCTCTCCATGCCTCAAAGGGATGTTGAGTTCTTTAACAATGATGCAGCAAAAGATGACAA 540
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AGACACCACAGAAAGTTCTCTTAGCAACACAGATTCATCTGCATCTGCTCTTCAGGTTAC 600
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TACGTACATTGCTAGTAGCAGTAGTCCAGTACCCTATCTGGAGACTCTTAACAAGTGCAT 660
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CTCGAATGAGATAAGTAAATACACTGAAAAATGCTACAGGATAGCCAAACAGGTGAGTGA 720
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AGCTCTTGAGCTTGAAAGTCTGGATTACCTTTACGCGCACAAATACCAGAGAACAAGAAC 780
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AGATCATCGGGAGACATCACCATGCCAAAGTGAACCCAAAGTTCATGGGAGGGACCAACA 840
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GCGTGACTTGATAATAAGCAAGTTAACAAGTGAGGAATGTGCTAGGAAGAAACTCTCTAT 900
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CCTTGCCATCATCGGTGATGGAGGTATTGGGAAAACTACTCTGGCTAAGCTAGTCTTCAA 960
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CAACTCAACAGTGTCAAAGCATTTTGACGTTCTGTTATGGGTTTATGTATCTGTTCACTT 1020
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGATCAAAATAAGATTATGCAGGAAATGTTGGACTCCTTTTGCGGGGATGAGCATGATGA 1080
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AATCAAGAAATCGAAGGAGCTTCAACTCCAAGACAAACTTGACTACTTATTGAAGTCAAA 1140
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ACGAGTGCTACTTGTTATGGATGACATGTGGGAGGATAGCACAAAGGAAAAATGGGATGA 1200
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GCTGTTAAATCCATTGCTTAAAAACGATGTTATGGGGAACAGTGTTCTTGTCACAACTCG 1260
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TAAACCATCTGTGGCAACAATGATAGAAGCAGCAGATCACATCAACCTGGATGGTTTGAA 1320
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AAAAGATGACTTTTGGTGTTTGTTCAAGGAATGTGTATTTGGACATGAGAACTATAAAGG 1380
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AGAACCAAGACTGGAAAAAATTGGGCAGCAGATAGTTGACAAGTTAAAGGGCAATCCTTT 1440
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AGCAGCAAAGACTGTAAGCAAAGTATTGAGAAGGAGCTTTGACGTTGATTACTGGAGGAG 1500
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AATTCTGCATACCGGTGAATGGAAGTACAAAAATGATGAGAATGATATCATGCCGGCCTT 1560
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GATGATCAGCTACAAATATCTTCCAGCTCACCTTCAAAGTTGTTTCTCGTACTGTGCTGT 1620
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GTTCCCAAAGTATCATAGGTATGAGAAAGAGCGTCTGATCGATATGTGGATAGCGCAAGA 1680
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TTTGCTATGTTCCGCTGATATTCACACACGACCTGAGGACATTGGAAATGAATACTTTGA 1740
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGATCTACTTGATTGGGGATTTTTCGAAAAACAGTTTGAGCACTCAACCTTACTCATCAT 1800
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GCATGATCTAATTCATGATCTGGCACAGAAGGTTTCATCTGACGAAAGCTTTACCATAGA 1860
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGGCAATGAGCCTAGGAATGCACCGCCATGTGTTCGTCATGTCAGTGTAATAACAGAGTG 1920
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGAGTACAAAACAAAATTGAATGGCACTGTGTATCCTAATGATTCTTTCCTCCAAGAGTT 1980
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CTCTAATTCCTTCCGTGAGTTGCAACAAAGGAGCTTAAGCACATTGATGCTGTTTGGGCC 2040
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ACATGACTTGGATTTTGCAGACACGTTTCGGCAAGAACTCAATGAGGTAAGGTCAATCCG 2100
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGTGTTGAAACTGGAGATGGTCTTCTTTGACTTGGATTCATTGATAGGCAACATCTCAGC 2160
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ATTTGTCAATCTTCGCTATCTAGAACTGGGCTGCTTCTACAAGGGCCCCAGGCTGGAGCT 2220
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ACCAGAAGCTATATGCAGGCTGTATCACCTTAAAGTCCTGGATATAAAGAAGAACTGGGG 2280
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TCCTAGCACATCTTTGCCAAGAGAAATGAGCAAGCTTGTTAACTTGCGGCATTTTATTGC 2340
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGAAAAGGAGTTACATGCAAAAATAGCTGGCATCGGAAAGATGGTTTCCCTGCAGGAGCT 2400
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AAAGGCATTTGATGTCAAAAAGGACCATGAGTTCAGCATATCACAGCTGAGAGGACTGAA 2460
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TCAGCTAAGGGGATCAATAAGCATTTCTAGTCTTTACAATGCAGGGCATGAAGAGGCTAG 2520
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CCAAGCAAGGCTCTGTGACAAGGATAACCTAACTTGTTTGCACCTGTCATGGCTGACTTT 2580
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ATCTAGGAACCGTGTTGCACGGCGTACTCTTCCTATCCTGGAGGATCTTAAACCACATTC 2640
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGGCCTTAAAAATCTGCAAGTTGTTGGATACAGGCATTCTTTACCATCATGGCTTTGCAG 2700
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CACTGTCAATCTCACCTCTTTGCGGTCACTCCACCTGGATAGATGCATACGTTGGCAAAC 2760
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AATTCCACATCCCCAGCAGTTGCCTCTTCTCCAGGAGCTGCATTTGATTCAACTGCCTCG 2820
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGTTTACAAAATAGAGATTGGTCCTCTGAAGGTCCTTGAAATACGCTGGTTGCAAAATCT 2880
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GAGGCAGTGCATACTTTTAGATAAGGAACAGTCATATGCTACCCTACAGATCCTTGAAGT 2940
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGAGGGATGCCCCAAATTGGATGAATTTCTATTGCAGATTTTCATGTCTTCGGGTGTACA 3000
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AAGCACATACCAATTTCTTGGTATTCACAGGCTTAAGATACACAATGACTTCCTTCGTGC 3060
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TAGCATCCCGCTCCTGCTCCTAAATTCTTTATCAGACATAGATCTGTGTGGTGAGCACTC 3120
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AAAATTTACGAGGTTTCGACTAAAACCATTTGGCACATCAGATGGGTTGAGTCTACAAAT 3180
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CAAAGGAGATAGATATATTCAGAAGATAGAGGAAAGATTGTTCACATTAGAGAAACTCAA 3240
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGATCTGCGGGAACTTGAAATCCGGGACTATCAATCAGTGATATTCCAACGTCAATTCTG 3300
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGAAGGCTTCGAACAGTTGACATCATTGAAAAAGTTTAGAGTGATCAAGTGCCCAGAAAT 3360
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ATTTTCTACCAACTTTGAGCTATTTCTGCCTCCGTCAGTTGAGGAACTTGAGTTGAGTGG 3420
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ATGCAACATTACATTGATACAACTATCACAACTCCTCGTGAACCTTCATTTACTTAAGAG 3480
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TTTCAAGTTAACTAATTGCCAAGGGGTAACATCCTTACCTGTAGGGTTGTTTACAGATGA 3540
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ACAGAACACAATGTCAGAAGGCTCATGGCACATTCCTCCCAGATGCTTCACGAGTCTGGA 3600
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 AAGTTTGCAAATCTCTTTCACAACAGCTCCATCTGATGCAAATTCAATTATGCACTTTAC 3660
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GAGCAAGAAAGGCCTAGGAAGATTTGTATCTCTTAAGAAAATTGTTATAGAAAATTGCCC 3720
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TACTCTGCTATCTAGAGCGCTTTCAGGAGGAGCATCTCATATATCTCCATCATCTTTGGA 3780
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TAAACTCTGCATGACTGGTATCCAAGACAGCACTCTGCAGTTCTCAGATGTCTCTTCCAT 3840
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CGCGGATTTAGATGTGTCTGGATGCCCGAAGTTGGCATGTCTCGACCTGAGTTCTTGTAC 3900
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CGCGCTAGAAAAGTTGTGTGTTATAGATTGCCGTTTGTTACAGTCAATTGAAGGTTTGCC 3960
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GTCATGCTCAGCACTGAGGGATTTGAAAATTCGAAACTGTGCATTGCTGCCTTCGCTCAG 4020
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CGCATCACTCCACACCCTGAAAACACTGAGCATAGAGAATAACACAAATCTAGCATCTCT 4080
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGAACTGAAATCATGCACATCATTGCAGAAACTATGCATCAAAGACTGCCCGGCACTGAC 4140
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ATCATGGGAAGGTTTGAAATCCCTTGTTTCTCTTGAGATCTTGAAAGTTGAAGCGTCTCC 4200
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGGGTTCATAACGAGATGGATATCAGCAGCAGCTGAAGTTAATATCGAGGAGAAGAATTT 4260
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CTCACTACCACTTGAAAAGCTCAACGTTGATAACATTGATGTCCTTTGTGTGCCCATATG 4320
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 CAGCCAGTTAACTTCTCTCAAGATATTATCCATTGAAGAGGATCGTCACGATCCAGATGG 4380
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TCATGTGGAGTTTTTGACAGACAACCATGTCAAAGGACTGTCATTTCTCACCTGCTTGAG 4440
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ATTTCTTGATCTGGAAAACCTTGAGCAACTCCGGTCACTGCCTGCAGAACTTGGATCCCT 4500
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 TGCATCCCTGCAGAGACTACATGTTGGCAACTGTGGACATATTACTTCCCTGCCGGTAGG 4560
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 GGGTCTCCCAGCTTCGCTCAAGGACATGGAACTCTATAATTGCAGCAAAGAACTAAACGT 4620
consensus_4152#1 ------------------------------------------------------------
consensus_4152#0 ACTGTGCCGAGATATGCTTAGACTTCGAAGAAACTTACATTTGTGGGTGGATGGCGACGA 4680
consensus_4152#1 ACCCTCTTAAGGGAA---TAGCTTGCGGCCGCTCTAACATCA--GAATGGT--GCGACGA 53
** * ** * *** * ** ** **** * *** *******
consensus_4152#0 GGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTGAGCTTATGTTCGCATA 4740
consensus_4152#1 GGAGGATTTCTTTTCACAGAATTGCTCTGACGAAGAAATAAGTTAGCTTATGTTCGCATA 113
******************************************* ****************
consensus_4152#0 TCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTC 4800
consensus_4152#1 TCGTATAGCCTTTACACCAGGTTCTTTTTTGGAAGAACAGAACAATACGAGAACACCTTC 173
************************************************************
consensus_4152#0 TATTTTCGATGAAGGGAGCAAAAGAAACAAAATATCAAAATACAAGAGAAGAAAAAAGGC 4860
consensus_4152#1 TATTTTCGATGAAGGGAGCAAAAGAAACAAAAAATCAAAATACAAGAGAAGAAAAAAGGC 233
******************************** ***************************
consensus_4152#0 TACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACA 4920
consensus_4152#1 TACAGCCTACAGATGAAAGACTATTCTTGGAAGTGTTGAATCTAAATTGCCTACGTAACA 293
************************************************************
consensus_4152#0 AGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAG 4980
consensus_4152#1 AGAAGCTACGATTCCGGCTGACACTCTGGATTTTTTAGACAATGGAATCTTTATTATAAG 353
************************************************************
consensus_4152#0 ACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTA 5040
consensus_4152#1 ACACAGCCAAATACTGTTACTGTGGATTGGTGTTGAAATACTGTCCAGTTTCAAGTGTTA 413
************************************************************
consensus_4152#0 AGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTAAATAATGGAATTTTACACGGACAT 5100
consensus_4152#1 AGGAAATAGAGCAGAACTTCAGACATCTTTCCTTTTAAAAAAAAAAAAAAAAAAAAAAAA 473
*********************************** ** ** ** * * * *
consensus_4152#0 CTACCACTTTATTCATGCCAACCATTTAACAAAGGGTTAATT 5142
consensus_4152#1 AAAAAACCAGA--GGGGCCGCTCCACCATCAAACTG------ 507
* ** * *** * * **** *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||