cluster # 4166

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Oryza sativa
cluster # 4166 cluster # 4166 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4166#0 length = 1157 sequences # 3
consensusID : consensus_4166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1157
fasta sequence
                              [ATTTTGGTTCGGCCCATTGGATCTTCCGACTCACACGCACCACCATGACCGACGGGCCCTCGACCACCGGCGATTCGCCGCCGCCGCCGCCGCCGGAGAGCGGCGGCTCCATCTCCTCCATGGTTGCCTCCTCTGCCGCCTCCGCTGCGGCCGCGGCCGCGGATTTCACTCGCCGTGGCGAGGCCTTCGGCGCCGATATGGCCTCCGCAGCTAGGGCTGCCATGGACACCGCCATCGCCCACTCTCAGTCAACCGCCATCGCCGCCGCAGAAGCTGCCTCCTCGGCCAAGGCCGACGCCCTCGCCGCCTTCCCCAGCCTCACGCTCAACGCAAAGGAGGAGTTCGAATGGTTAAAGAAGGAGTACACGGTTCACGAGCAGGTGGTGTTCGGCAAGATCAAAGAGGGTGCCATCATGGCCATCGAGCATCCGGGAATTGCTGCAGGCTCCACAGCAATTGCTGGAATTGTGCTCTTCAAAAGGCCAAGGAGCTACCTGATCCAACGGGTGCGACGCATATTTGTAAGCAAGGAGACCCTACTTTCTGGCATCCAAGCTGGCGTGAATCACATGAGACAAACTGTCAATCTTGTGTCCAATGAAAGCCAAAAGTTGCTGGATAGAGCAGCAACTGCTGAAAAAAGATTTCAGAAAGGATGGAACACACTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGCTGAACCAAATAAGTGATATTGAGAAGCAAGCAGTAGGTCTCAAGAGCATTCTCAATCAGCTTCCCAGAGCACATGCATCTGAGTTTCAATCAGAGATATCTGGCCTAGCCTCTCAGGTGAAGAAGGAGAAGAGAGTACTTAACAACACCCTCACGAAGATTGCGAACTATGGTGTCCCTATCTGACTGTCGAAACGCAGCTTCATTTGCTGTAGTTTTTATCAATGAAGAGATTCTGAAGACATGGGTGAATCTTTTACTTTATACTACTTGTCCGCGGAGGGGAAAGGAAATAATACGTTTTATCAGTCTTGGCGAGATGTAAATTTGCCGCTGGTGCTGCAGCAGCAACATAACATTTTTGTAGTGTTTTGCATCATATGGGCATTCTCTGTTGCATTGTCCATGAAGTGAAATGGACATACTGCGTCGACCTTCCCTGCAATTAATCAAATTATG]

[+] EMBL AK070860             [ATTTTGGTTCGGCCCATTGGATCTTCCGACTCACACGCACCACCATGACCGACGGGCCCTCGACCACCGGCGATTCGCCGCCGCCGCCGCCGCCGGAGAGCGGCGGCTCCATCTCCTCCATGGTTGCCTCCTCTGCCGCCTCCGCTGCGGCCGCGGCCGCGGATTTCACTCGCCGTGGCGAGGCCTTCGGCGCCGATATGGCCTCCGCAGCTAGGGCTGCCATGGACACCGCCATCGCCCACTCTCAGTCAACCGCCATCGCCGCCGCAGAAGCTGCCTCCTCGGCCAAGGCCGACGCCCTCGCCGCCTTCCCCAGCCTCACGCTCAACGCAAAGGAGGAGTTCGAATGGTTAAAGAAGGAGTACACGGTTCACGAGCAGGTGGTGTTCGGCAAGATCAAAGAGGGTGCCATCATGGCCATCGAGCATCCGGGAATTGCTGCAGGCTCCACAGCAATTGCTGGAATTGTGCTCTTCAAAAGGCCAAGGAGCTACCTGATCCAACGGGTGCGACGCATATTTGTAAGCAAGGAGACCCTACTTTCTGGCATCCAAGCTGGCGTGAATCACATGAGACAAACTGTCAATCTTGTGTCCAATGAAAGCCAAAAGTTGCTGGATAGAGCAGCAACTGCTGAAAAAAGATTTCAGAAAGGATGGAACACACTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGCTGAACCAAATAAGTGATATTGAGAAGCAAGCAGTAGGTCTCAAGAGCATTCTCAATCAGCTTCCCAGAGCACATGCATCTGAGTTTCAATCAGAGATATCTGGCCTAGCCTCTCAGGTGAAGAAGGAGAAGAGAGTACTTAACAACACCCTCACGAAGATTGCGAACTATGGTGTCCCTATCTGACTGTCGAAACGCAGCTTCATTTGCTGTAGTTTTTATCAATGAAGAGATTCTGAAGACATGGGTGAATCTTTTACTTTATACTACTTGTCCGCGGAGGGGAAAGGAAATAATACGTTTTATCAGTCTTGGCGAGATGTAAATTTGCCGCTGGTGCTGCAGCAGCAACATAACATTTTTGTAGTGTTTTGCATCATATGGGCATTCTCTGTTGCATTGTCCATGAAGTGAAATGGACATACTGCGTCGACCTTCCCTGCAATTAATCAAATTATG]
[+] EMBL CA755874             [                                                                                                                                                                                         TTCGGCGCCGATGTGGCCTCCGCAGCTAGGGCTGCCATGGACACCGCCATCGCCCACTCTCAGTCAACCGCCATCGCCGCCGCAGAAGCTGCCTCCTCGGCCAAGGCCGACGCCCTCGCCGCCTTCCCCAGCCTCACGCTCATCGCAAAGGAGGAGTTCGAATGGTTAAAGAAGGAGTACACGGTTCACGAGCAGGTGGTGTTCGGCAAGATCAAAGAGGGTGCCATCATGGCCATCGAGCATCCGGGAATTGCTGCAGGCTCCACAGCAATTGCTGGAATTGTGCTCTTCAAAAGGCCAAGGAGCTACCTGATCCAACGGGTGCGACGCATATTTGTAAGCAAGGAGACCCTACTTTCTGGCATCCAAGCTGGCGTGAATCACATGAGACAAACTGTCAATCTTGTGTCCAATGAAAGCCAAAAGTTGCTGGATAGAGCAGCAACTGCTGAAAAAAGATTTCAGAAAGGATGGAACACACTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGCTGAACCAAATAAGTGATATTGAGAAGCAAGCAGTAGGTCTCAAGAGCATTCTCAATCAGCTTCCCAGAGCACATGCATCTGAGTTTCAATCAGAGATATCTGGCCTAGCCTCTCANGTGAAGAAGGAGAAGAGAGTACTTAACAACACCCTCACGAAGATTGCGAACTATGGTGTCCCTATCTGACTGTCGAAACGCANCTTCATTTGCTGTAGTTTTTATCAATGAAGAGA                                                                                                                                                                                                                                  ]
[-] EMBL CA923303             [                                                                                                                                                                                                                                                                                                                                                                                     CGAGCAGGTGGTGTTCGGCAAGATCAAAGAGGGTGCCATCATGGCCATCGAGCATCCGGGAATTGCTGCAGGCTCCACAGCAATTGCTGGAATTGTGCTCTTCAAAAGGCCAAGGAGCTACCTGATCCAACGGGTGCGACGCATATTTGTAAGCAAGGAGACCCTACTTTCTGGCATCCAAGCTGGCGTGAATCACATGAGACAAACTGTCAATCTTGTGTCCAATGAAAGCCAAAAGTTGCTGGATAGAGCAGCAACTGCTGAAAAAAGATTTCAGAAAGGATGGAACACACTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGCTGAACCAAATAAGTGATATTGAGAAGCAAGCAGTAGGTCTCAAGAGCATTCTCAATCAGCTTCCCAGAGCACATGCATCTGAGTTTCAATCAGAGATATCTGGCCTAGCCTCTCAGGTGAAGAAGGA                                                                                                                                                                                                                                                                                                                                           ]




>consensus_4166#0
ATTTTGGTTCGGCCCATTGGATCTTCCGACTCACACGCACCACCATGACCGACGGGCCCT
CGACCACCGGCGATTCGCCGCCGCCGCCGCCGCCGGAGAGCGGCGGCTCCATCTCCTCCA
TGGTTGCCTCCTCTGCCGCCTCCGCTGCGGCCGCGGCCGCGGATTTCACTCGCCGTGGCG
AGGCCTTCGGCGCCGATATGGCCTCCGCAGCTAGGGCTGCCATGGACACCGCCATCGCCC
ACTCTCAGTCAACCGCCATCGCCGCCGCAGAAGCTGCCTCCTCGGCCAAGGCCGACGCCC
TCGCCGCCTTCCCCAGCCTCACGCTCAACGCAAAGGAGGAGTTCGAATGGTTAAAGAAGG
AGTACACGGTTCACGAGCAGGTGGTGTTCGGCAAGATCAAAGAGGGTGCCATCATGGCCA
TCGAGCATCCGGGAATTGCTGCAGGCTCCACAGCAATTGCTGGAATTGTGCTCTTCAAAA
GGCCAAGGAGCTACCTGATCCAACGGGTGCGACGCATATTTGTAAGCAAGGAGACCCTAC
TTTCTGGCATCCAAGCTGGCGTGAATCACATGAGACAAACTGTCAATCTTGTGTCCAATG
AAAGCCAAAAGTTGCTGGATAGAGCAGCAACTGCTGAAAAAAGATTTCAGAAAGGATGGA
ACACACTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGCTGAACCAAATAAGTGATATTG
AGAAGCAAGCAGTAGGTCTCAAGAGCATTCTCAATCAGCTTCCCAGAGCACATGCATCTG
AGTTTCAATCAGAGATATCTGGCCTAGCCTCTCAGGTGAAGAAGGAGAAGAGAGTACTTA
ACAACACCCTCACGAAGATTGCGAACTATGGTGTCCCTATCTGACTGTCGAAACGCAGCT
TCATTTGCTGTAGTTTTTATCAATGAAGAGATTCTGAAGACATGGGTGAATCTTTTACTT
TATACTACTTGTCCGCGGAGGGGAAAGGAAATAATACGTTTTATCAGTCTTGGCGAGATG
TAAATTTGCCGCTGGTGCTGCAGCAGCAACATAACATTTTTGTAGTGTTTTGCATCATAT
GGGCATTCTCTGTTGCATTGTCCATGAAGTGAAATGGACATACTGCGTCGACCTTCCCTG
CAATTAATCAAATTATG
clustalw multiple alignements is not computed in this case