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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4168 cluster # 4168       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4168#0 length = 676 sequences # 3  

consensusID : consensus_4168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 676
fasta sequence
                              [TGTTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGATTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AB054528             [TGTTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCCGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTGCTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGATTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK121417             [  TTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACAC                                                                                                        ]
[+] EMBL AK063832             [   TCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAAACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGGACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCTTCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCCGTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTGATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTTAGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGAATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATCACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCGAGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGATTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGAAAAccagata          ]


>consensus_4168#0 TGTTCGATCTTTGCTTTCATCAATCCACCTTGTTTGATCTCTGCTCTGAGTTCTGAAGAA ACTGTGGTCGATCGGCGATCGGATCGATCGGGATCGATGTCGAGCCTGGTAGACATTTGG ACGGTGGAACGGGAGAGGATCCGGGTCAGCGGCGCGCAGGCGTTCAGGACGACGGTGGCT TCGAAGCGAGGCTGCACGGCTCGTTCTGACGACGGCCAGAACAAGCCTGACGGCGCGGCC GTGGAAACGGCTGCCAAGAAGCAGCAGGCCGCTGCCGTTGGTGGCGCGCCGGCGAGCGTG ATCCAAGAAGACGCTTTCTTGTCCATCCTGATCGATTGCTTCGGCCAGTAGAGTAGGCTT AGCTTGGCGTTACAGGGCACTCTCTCCATCGTAAAATAGCTACTATACCTTTAGCTATGA ATCTGAACCTGGTGATTTCGACGGTCTCGTGTGATTTTTGTGTAAATCTTCTGAAATATC ACTGCAGTACTGTCTGAATCCTGGAAGTCTCTGTAGCGAAAGCCCACTTTTCTTCAATCG AGATATGATGGTTTAGCGGGTTCGAAGTACACGATCATGAGACGATTCGAGTGAAGGGGA TTCTATAATTCATCGCCACCACTCGGTTAAATCAGATATTTTCATCTTTTTCTTGTAAAA AAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)