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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4180#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2372 fasta sequence
[GGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGGCGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGCGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGAGCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAACAGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGATTTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTGTTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTATCAG]
[+] EMBL AK073061 [GGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGGCGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGCGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGAGCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAACAGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGATTTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTGTTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTATCAG]
consensusID : consensus_4180#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1919 fasta sequence
[GACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTCAATACTCTGTCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTATTAATTAGGAAGACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTTCTGCTTTCAACTGAAACTACTCTG]
[+] EMBL AK109643 [GACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTCAATACTCTGTCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTATTAATTAGGAAGACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTTCTGCTTTCAACTGAAACTACTCTG]
consensusID : consensus_4180#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1631 fasta sequence
[TCAATGTGTCCTACAATAACCTGTCAGGGCCTGTGCCTGTAGCTCTTTCCAGCAAGTTCAATGCCAGCTCGTTCGCGGGAAACATCCAGCTCTGTGGGTACAATGGCTCCGCCATTTGCACCTCCATTTCCTCTCCAGCGACCATGGCGTCGCCGCCGGTGCCTTTGTCGCAGCGGCCAACACGGAAACTCAACAAGAGGGAGCTCATCTTTGCAGTCGGTGGCATCTGCTTGCTGTTCCTGCTCCTCTTCTGCTGCGTCCTCCTCTTCTGGAGGAAAGACAAGCAGGAGAGCGAGTCGCCCAAGAAGGGCGCCAAGGACGCCACCGCCAAGGCGGCGGCCGGGAAGTCCGGAGGCGGCGGTGGCGGCTCGGGCGGCGCCGGTGGTGACGGCGGCGGCAAGCTTGTCCACTTCGACGGGCCGCTCTCGTTCACGGCGGACGACCTGCTGTGCGCGACGGCGGAGATCCTGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACCATGGAGAATGGCACCTTCGTCGCGGTGAAGCGGCTCCGGGAGAAGATCGCCAAGAACCAGAAGGAGTTCGAGGCGGAGGTGAACGCGCTCGGCAAGCTCCGCCACCCCAACCTCCTCGCCCTCAGGGCCTACTACCTCGGCCCCAAGGGCGAGAAGCTCCTCGTCTTCGACTTCATGACCAAGGGCAACTCACCTCCTTCCTCCATGCTCGCGCCCCGGTCAGCCCGGTGGACTGGCCGACGAGGATGAACATCGCGTTGGGCGTGGCCCGTGGGCTGCACCACCTGCACGCGGAGGCGAGCATCGTGCACGGCAACCTGACGAGCAACAACATCCTGCTCGACGAGGGGAACGACGCCAGGATCGCCGACTGCGGCCTGTCGCGCCTCATGAACGCCACGGCCAACTCCAACGTCATCGCCGCGGCGGGCGCGCTGGGCTACCGCGCGCCGGAGCTCTCCAAGCTGAAGAAGGCCAACGCCAAGACGGACATCTACAGCCTCGGCATGATCATGCTCGAGCTCCTCACCGGCAAGTCGCCCGGCGACACGACCAACGGCCTCGACCTGCCGCAGTGGGTGGCCTCTGTCGTGGAGGAGGAGTGGACCAACGAGGTGTTCGACCTTGAGCTCATGAAGGACGCGGCCGCCGCGGGCTCGGAGACCGGCGAGGAGCTCGTGAAGACGCTCAAGCTGGCGCTGCACTGCGTCGATCCTTCACCGGCGGCGAGGCCAGAGGCCCAGCAGGTTCTCAGACAGCTCGAGCAGATCAAGCCCTCGGTGGCAGTATCGGCCTCCTCGTCCTTCACCGGCGAGCCGAGCCAAACCACCGCGACGGCGACGACGATCACCGACGACACAAAATCGACTATTACAGAGTAGTCAGCCTCTTGCAGACTGAAAAGTTTCGGTTCTTAGTTACTTCAGATCATCAATAAGTAGACTCCATAGTCTATTTTTCGGTCTGTATATAAGGCTTTTAGGGGGGTTAGGAGAATTTTGGTGCTCATGCCATTCTTTGATTCCTGAATTCTTTTGTATCTGCCAGAAGCACTCCTTGTTATCAGAAGATGATATGGGAGTGCTGGCTTCTCATTAAGTTTCAGGCAAACTTGTAGTGCTTCAG]
[+] EMBL AK107121 [TCAATGTGTCCTACAATAACCTGTCAGGGCCTGTGCCTGTAGCTCTTTCCAGCAAGTTCAATGCCAGCTCGTTCGCGGGAAACATCCAGCTCTGTGGGTACAATGGCTCCGCCATTTGCACCTCCATTTCCTCTCCAGCGACCATGGCGTCGCCGCCGGTGCCTTTGTCGCAGCGGCCAACACGGAAACTCAACAAGAGGGAGCTCATCTTTGCAGTCGGTGGCATCTGCTTGCTGTTCCTGCTCCTCTTCTGCTGCGTCCTCCTCTTCTGGAGGAAAGACAAGCAGGAGAGCGAGTCGCCCAAGAAGGGCGCCAAGGACGCCACCGCCAAGGCGGCGGCCGGGAAGTCCGGAGGCGGCGGTGGCGGCTCGGGCGGCGCCGGTGGTGACGGCGGCGGCAAGCTTGTCCACTTCGACGGGCCGCTCTCGTTCACGGCGGACGACCTGCTGTGCGCGACGGCGGAGATCCTGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACCATGGAGAATGGCACCTTCGTCGCGGTGAAGCGGCTCCGGGAGAAGATCGCCAAGAACCAGAAGGAGTTCGAGGCGGAGGTGAACGCGCTCGGCAAGCTCCGCCACCCCAACCTCCTCGCCCTCAGGGCCTACTACCTCGGCCCCAAGGGCGAGAAGCTCCTCGTCTTCGACTTCATGACCAAGGGCAACTCACCTCCTTCCTCCATGCTCGCGCCCCGGTCAGCCCGGTGGACTGGCCGACGAGGATGAACATCGCGTTGGGCGTGGCCCGTGGGCTGCACCACCTGCACGCGGAGGCGAGCATCGTGCACGGCAACCTGACGAGCAACAACATCCTGCTCGACGAGGGGAACGACGCCAGGATCGCCGACTGCGGCCTGTCGCGCCTCATGAACGCCACGGCCAACTCCAACGTCATCGCCGCGGCGGGCGCGCTGGGCTACCGCGCGCCGGAGCTCTCCAAGCTGAAGAAGGCCAACGCCAAGACGGACATCTACAGCCTCGGCATGATCATGCTCGAGCTCCTCACCGGCAAGTCGCCCGGCGACACGACCAACGGCCTCGACCTGCCGCAGTGGGTGGCCTCTGTCGTGGAGGAGGAGTGGACCAACGAGGTGTTCGACCTTGAGCTCATGAAGGACGCGGCCGCCGCGGGCTCGGAGACCGGCGAGGAGCTCGTGAAGACGCTCAAGCTGGCGCTGCACTGCGTCGATCCTTCACCGGCGGCGAGGCCAGAGGCCCAGCAGGTTCTCAGACAGCTCGAGCAGATCAAGCCCTCGGTGGCAGTATCGGCCTCCTCGTCCTTCACCGGCGAGCCGAGCCAAACCACCGCGACGGCGACGACGATCACCGACGACACAAAATCGACTATTACAGAGTAGTCAGCCTCTTGCAGACTGAAAAGTTTCGGTTCTTAGTTACTTCAGATCATCAATAAGTAGACTCCATAGTCTATTTTTCGGTCTGTATATAAGGCTTTTAGGGGGGTTAGGAGAATTTTGGTGCTCATGCCATTCTTTGATTCCTGAATTCTTTTGTATCTGCCAGAAGCACTCCTTGTTATCAGAAGATGATATGGGAGTGCTGGCTTCTCATTAAGTTTCAGGCAAACTTGTAGTGCTTCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4180#0 ------------------------------------------------------------
consensus_4180#1 GACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCG 60
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 ------------------------------------------------------------
consensus_4180#1 GACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCC 120
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 ------------------------------------------------------------
consensus_4180#1 CCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCG 180
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 ------------------------------------------------------------
consensus_4180#1 TCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACC 240
consensus_4180#2 -------------------TCAATGTGTCCTACAA-TAACCTGTCAGGGCCTGTGC--CT 38
consensus_4180#0 ------------------------------------------------------------
consensus_4180#1 CCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGG 300
consensus_4180#2 GTAGCTCTTTCCAGCAAGTTCAATGCCAGCTCGTTCGCGGGAAACATCCAGCTCTGTGGG 98
consensus_4180#0 -------------------GGGCAAGGTCGTCGCCATCACC-CTCCCATGGCGCGGCCTC 40
consensus_4180#1 TCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACC-CTCCCATGGCGCGGCCTC 359
consensus_4180#2 T--ACAATGGCTCCGCCATTTGCACCTCCATTTCCTCTCCAGCGACCATGGCGTCGCC-- 154
*** * * ** * * ******** ***
consensus_4180#0 GCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGC-CTCAGCCTCCA 99
consensus_4180#1 GCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGC-CTCAGCCTCCA 418
consensus_4180#2 GCCGGTGCCTTTGTCGCAGCGGCCAACACGGAAACTCAACAAGAGGGAGCTCATCTTTGC 214
***** ** * ** * * * ** ** * * **** * *
consensus_4180#0 CGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGG 159
consensus_4180#1 CGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGG 478
consensus_4180#2 AGTCGGTGGCATCTGCTTGCTGTTCCTGCTCCTCTTCTGCTGCGTCCTCCTCTTCTGGAG 274
* * * ***** * * *** * * ** *** * *** * * ** * *
consensus_4180#0 CGTCTACCTCTTCAACAACCGCTTCTCCGGC---GCCGTCCCGGCCTCCATTGGCAACTG 216
consensus_4180#1 CGTCTACCTCTTCAACAACCGCTTCTCCGGC---GCCGTCCCGGCCTCCATTGGCAACTG 535
consensus_4180#2 GAAAGACAAGCAGGAGAGCGAGTCGCCCAAGAAGGGCGCCAAGGACGCCACCGCCAA--- 331
** * * * * ** * ** * ** * *** * ***
consensus_4180#0 CGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTC-CGTCCT 275
consensus_4180#1 CGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTC-CGTCCT 594
consensus_4180#2 GGCGGCGGCCGGGAAGTCCGGAGGCGGCGGTGGCGGCTCGGGCGGCGCCGGTGGTGACGG 391
* *** * * ** ** * * ** * * ******* * * *
consensus_4180#0 CACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAAC--ACCATCTCCGG 333
consensus_4180#1 CACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAAC--ACCATCTCCGG 652
consensus_4180#2 CGGCGGCAAGCTTGTCCACTTCGACGGGCCGC--TCTCGTTCACGGCGGACGACCTGCTG 449
* ** * ** *** * * *** * *** *** * ** * ** * *
consensus_4180#0 CGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAA 393
consensus_4180#1 CGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAA 712
consensus_4180#2 TG-CGCGACGGCGGAGATCCTGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACCAT 508
* * * * *** ** * * * ** ** * * * ** **
consensus_4180#0 CAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTC 453
consensus_4180#1 CAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTC 772
consensus_4180#2 GGAGAATGGCACCTTCGTCGCGGTGA-----AGCGGCTCCGGGAGAAGATCGCCAAGAAC 563
** * * * ** * * * ******* * ** * *
consensus_4180#0 GCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAAC-T 512
consensus_4180#1 GCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAAC-T 831
consensus_4180#2 -CAGAAGGAGTTCGAGGCGGAGGTGAACGCGCTCGGCAAGCTCCGCCACCCCAACCTCCT 622
* ***** * * * * * ** **** * *** * * * ** * *
consensus_4180#0 CGCTCG-ATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGAC 571
consensus_4180#1 CGCTCG-ATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGAC 890
consensus_4180#2 CGCCCTCAGGGCCTACTACCTCGGCC-----CCAAGGGCGAGAAGCTCCTCGTCTTCGAC 677
*** * * **** **** * * ** * * ******* * ** * ***
consensus_4180#0 CTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTC 631
consensus_4180#1 CTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTC 950
consensus_4180#2 TTCA-TGACCAAGGGCAACTCACCTCCTTCCTCCAT-------GCTCGCGCCCCGG--TC 727
** ** * * *** * * ** *** * * ****** * *** **
consensus_4180#0 AAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAAC 691
consensus_4180#1 AAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAAC 1010
consensus_4180#2 AGCCCGGTGGAC-TGGCCGACGAGG--ATGAACATCGCG-TTGGGCGTGGCCCGTG-GGC 782
* ** * *** * *** * * * * * * ** * * * *** ** *
consensus_4180#0 CTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCA 751
consensus_4180#1 CTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCA 1070
consensus_4180#2 TGCACCACCTGCACGCG-GAGGCGAGCATCGTGCACGGCAACCTGAC--GAGCAACAACA 839
*** ** ** * * * * ** ** ****** * * *** **
consensus_4180#0 GCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGC 811
consensus_4180#1 GCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGC 1130
consensus_4180#2 TCCT-GCTCGACGAGGGGAACGA---CGCCAGGATCGCCGACTGCGGCCTGTC--GCGCC 893
*** ***** ** ** ** ****** * * ** * *** *
consensus_4180#0 TACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCA 871
consensus_4180#1 TACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCA 1190
consensus_4180#2 T------CATGAACGCCACGGCCAACTCCAACGTCATCGCCGCGGCGGGCGCGCTGGGCT 947
* * * *** * ** ** * **** * * * **** *
consensus_4180#0 CCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCG 931
consensus_4180#1 CCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCG 1250
consensus_4180#2 ACCGCGCG----CCGGAGCTCTCCAAGCTGAA---GAAGGCCAACGCCAAGACGGACATC 1000
****** * **** * ** * **** ** ***** * *
consensus_4180#0 CTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTG 991
consensus_4180#1 CTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTG 1310
consensus_4180#2 TACAGCCTCGGCATGATCATGCTCGAGCTCCTCACCGGCAAGTCGCCCGGCGACACGACC 1060
* * *** * *** ** *** **** * * * *** * ** ** *
consensus_4180#0 CTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAG 1051
consensus_4180#1 CTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAG 1370
consensus_4180#2 AACGGCCTCGACCTGCCGCAGTGGGTGGCCTCTGTCGTGGAGGAGGAGTGGACCAACGAG 1120
* * ** * * ** ** * * ** * ** ** * ** ** * **
consensus_4180#0 GCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCG 1111
consensus_4180#1 GCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCG 1430
consensus_4180#2 GTGTTCGAC-------CTTGAGCTCATGAAGGACGCGGCCGCCG--------CGGGCTCG 1165
* ** * **** * ** **** ** * **** ***
consensus_4180#0 GGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGGCGGG 1171
consensus_4180#1 GGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGG 1490
consensus_4180#2 GAGACCGGCGAG---GAGCTCGTGAAGACGCTCAAGCTGGCGCTGCACTGCGTCGATCCT 1222
* * * * *** *** ** * * * * **** * ***
consensus_4180#0 CCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGC 1231
consensus_4180#1 CCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGC 1550
consensus_4180#2 TCACCGGCGGCGAGGCCAGAGGCCCAGCAG-GTTCTCAGAC--AGCTCGAGCAGATCAAG 1279
* **** * * * ** * ** ** * ** * * * ** * * ** *
consensus_4180#0 ACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGC-AGCCTTGTGGCGGTGAAGCG 1290
consensus_4180#1 ACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGC-AGCCTTGTGGCGGTGAAGCG 1609
consensus_4180#2 CCCTCGGTGGCAGTATCGGCCTCCTCGTCCTTCACCGGCGAGCCGAGCCAAACCACCGCG 1339
* * * * * ** * * ** **** **** * ***
consensus_4180#0 GCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGG 1350
consensus_4180#1 GCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGG 1669
consensus_4180#2 AC-GGCGACGACGATCACCGACG-ACACAAAA---TCGACTATTACAGAGTAGT------ 1388
* * * ** ******* * * ****** **** * * * **
consensus_4180#0 CAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGA 1410
consensus_4180#1 CAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGA 1729
consensus_4180#2 CAGCCTCTTGCAGACTGAAAAGTTTCGGTTCTTAG----TTACTTCAGATCATCAATAAG 1444
** ** ** * * * * * * ** * *** ** ** *
consensus_4180#0 GAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCG 1470
consensus_4180#1 GAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTC- 1788
consensus_4180#2 TAGACTCCATAGTCTATTTTTCGGTCTGTATATAAGGCTTTTAGGGGGGTTAGG------ 1498
* **** ** *** * * ** ** * * *
consensus_4180#0 CGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCG 1530
consensus_4180#1 -------AATACTCTG-TCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTA 1840
consensus_4180#2 -------AGAATTTTG----GTGCTCATGCCATTCTTTGATTC--CTGAATTCTTTTGTA 1545
* * * * * *
consensus_4180#0 TGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCA-CCGCCAGCA 1589
consensus_4180#1 TTAATTAGGAA-----GACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTT 1895
consensus_4180#2 TCTGCCAGAAGCA---CTCCTTGTTATCAGAAGATGATATGGGAGTGCTGGCTTCTCATT 1602
* * * * ** * * * *
consensus_4180#0 ATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCA 1649
consensus_4180#1 CTGCTTTCAACTGAAACTACTCTG------------------------------------ 1919
consensus_4180#2 AAG-TTTCAGGCAAACTTGTAGTGCTTCAG------------------------------ 1631
* **
consensus_4180#0 TGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCC 1709
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 CCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCA 1769
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 TCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGC 1829
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 CGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGCGTTCGACCTCGAGC 1889
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 TCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGG 1949
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 CGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGC 2009
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 AGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCG 2069
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 CAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGA 2129
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 GCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAAC 2189
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 AGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGAT 2249
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 TTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTG 2309
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 TTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTAT 2369
consensus_4180#1 ------------------------------------------------------------
consensus_4180#2 ------------------------------------------------------------
consensus_4180#0 CAG 2372
consensus_4180#1 ---
consensus_4180#2 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||