cluster # 4184

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4184 cluster # 4184 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4184#0 length = 1860 sequences # 3
consensusID : consensus_4184#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1860
fasta sequence
                              [AATTGGAGAGAATGCATGACAGCACACCACACATTGACACCACTGAGGCAGGCAGTGCCTCTCCAAAACAAAACGCCACAAAACTAGCAAGTGTGCTTAAAGAAAAATTTTAACCTATCGGCGAGCATTGTGCTTGTGTTGTGCAGCGGCACACGCTGATAGCGCGCTCTCCCTTCCCCTGCTTCGAAGGGTCCACGCAGAAAATCCCTTGGCTCCAAGAGGCAGGCGCCCGGTGCACGTACGTACA-GTG-GCGCCAGTTGCCACCAAGGCGAACG-CATGGCGCCTGCTCCTCCTCCTCCGACGATGGCGCCGCCGCCGACGCCGCGGAAGCCATTGCCATTGCTCCTCCTCTCCCTCTCCCTCCCTTTCCTCCTCCTGCTTCTCTCCCTCGTCTTCCTCCTCTCGCACACCACCTTCAGCCTCCTGCTCTGCCCACTCCTCCCGCGGCCAACTTCGAGGCCGAATGCCACGACGATGGCTACGACGACGGTGGCCGCTGCTCCTCCTACACTTGATGTATCCATGGACAAGTCGCTGCGAGCCTTCCATGCATCGTCGCCGCCGCCGCCGACACCGACGACGACGACGACACCGACACCGACACCTCCTCTTCCGCCGCCGGCTCCTCCTGCTTCTCCTGCCAAGAGCAACAAGAAGGCGTCCGCGAAGAGGAACAAGAGCCTCCTCAAGCTGCTGCTCAGGGAGACTCCCCGGACGCGGCGGTTCGCGGCGCGCGCGGGCGAGCTCTTCGCCTCGCCGCGGCCGTGCACGCGGCGCTTTTTCATGACGTGGCTCTCCCCGCTCGCGCGGTTCGGCCGCCGCGAGCTCCTCGTCGTGGAGAGCCTCTTCAGGTCGCACCGCGACGCCTGCCTCCTCATCGCCTCCGACACCATGGACTCCGACGGCGGCGGCGACAGGCTCGGCCCGTTCCTCGACCGCGGCCTCCGCGTCGCCGCCGCCTCGCCGGACATGGCCTACCTCCTGAACGGCACGCCGGCGGAGGCGTGGCTGGGCGCGGTGCAGCGCGGGGACGTCAGCCCCGGCAGCATCCCGCTCGGGCAGAACCTCTCCAACCTCCTCCGCCTCGCCCTGCTCTACAAGTACGGCGGTGTCTACCTCGACGCCGACGTCGTCGTTCTCAGGCCCTTCTCCGACCTCCGCAACGCCATCGGCGCGCAGGCCGTGGACGCGTCCACCGGCGACTGGATGCGCCTCAACAACGCCGTCATGGTGTTCGACCGGGGCCACCCGCTGCTCCGCGAGTTCATCGCTGAGTTCGCCGCCAAGTTCGACGGCAGCAAGTGGGGCCACAACGGGCCGTACCTCGTGTCGAGGGTGGCGGCGAGGTGGCGTCGCCGCCGGAGGCCGGAGGCGGAGGCTGACCTGACGGTGCTGCCGCCGGCGGCGTTCTACCCCGTCGACTGGAACAAGATCGGCGGGCTGTTCGTTGCACCCAAGGACAGGAAGGGCGAGAGGTGGGTGAAGGCCAAGGTTGAGAGCATCAAAGGTGAGAGCTTTGGCATCCATCTGTGGAACAGGGAGAGCAGGAGCCTGGAAATGGAGGAGGGCAGTGTGATTGGAAGGTTACTCTCAGACAGCTGCTTGTTCTGCAATTCCTCCATGTTTGCAAAGTATGAATAGTTGCACAAATGCAAAGAGATAACGAGATTGGAATATGTGGGATGTCAGACAAAATGTACATCTTCACTTGGCAGGTAAGCAATGACAAAATAACAGTGGCTTTGCACTTGTAAGATTTTGTCGGCACGGCAAAAAAAAAAAAATATGTATATGAAGCTATGCTAATCTTTGACTCACAGAGTCACAGTGCACTTTCAGTAAATAATTAATTTGACAGAA]

[+] EMBL C91844               [AATTGGAGAGAATGCATGACAGCACACCACACATTGACACCACTGAGGCAGGCAGTGCCTCTCCAAAACAAAACGCCACAAAACTAGCAAGTGTGCTTAAAGAAAAATTTTAACCTATCGGCGAGCATTGTGCTTGTGTTGTGCAGCGGCACACGCTGATAGCGCGCTCTCCCTTCCCCTGCTTCGAAGGGTCCACGCAGAAAATCCCTTGGCTCCAAGAGGCAGGCGCCCGGTGCACGTACGTACA GTGNGCGCCAGTTGCCACCAAGGCGAACG CATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK121532             [                                                                                                                                                                                                      AGAAAATCCCTTGGCTCCAAGAGGCAGGCGCCCGGTGCACGTACGTGCACATG GCGCCAGTTGCCACCAAGGCGAACGCCATGGCGCCTGCTCCTCCTCCTCCGACGATGGCGCCGCCGCCGACGCCGCGGAAGCCATTGCCATTGCTCCTCCTCTCCCTCTCCCTCCCTTTCCTCCTCCTGCTTCTCTCCCTCGTCTTCCTCCTCTCGCACACCACCTTCAGCCTCCTGCTCTGCCCACTCCTCCCGCGGCCAACTTCGAGGCCGAATGCCACGACGATGGCTACGACGACGGTGGCCGCTGCTCCTCCTACACTTGATGTATCCATGGACAAGTCGCTGCGAGCCTTCCATGCATCGTCGCCGCCGCCGCCGACACCGACGACGACGACGACACCGACACCGACACCTCCTCTTCCGCCGCCGGCTCCTCCTGCTTCTCCTGCCAAGAGCAACAAGAAGGCGTCCGCGAAGAGGAACAAGAGCCTCCTCAAGCTGCTGCTCAGGGAGACTCCCCGGACGCGGCGGTTCGCGGCGCGCGCGGGCGAGCTCTTCGCCTCGCCGCGGCCGTGCACGCGGCGCTTTTTCATGACGTGGCTCTCCCCGCTCGCGCGGTTCGGCCGCCGCGAGCTCCTCGTCGTGGAGAGCCTCTTCAGGTCGCACCGCGACGCCTGCCTCCTCATCGCCTCCGACACCATGGACTCCGACGGCGGCGGCGACAGGCTCGGCCCGTTCCTCGACCGCGGCCTCCGCGTCGCCGCCGCCTCGCCGGACATGGCCTACCTCCTGAACGGCACGCCGGCGGAGGCGTGGCTGGGCGCGGTGCAGCGCGGGGACGTCAGCCCCGGCAGCATCCCGCTCGGGCAGAACCTCTCCAACCTCCTCCGCCTCGCCCTGCTCTACAAGTACGGCGGTGTCTACCTCGACGCCGACGTCGTCGTTCTCAGGCCCTTCTCCGACCTCCGCAACGCCATCGGCGCGCAGGCCGTGGACGCGTCCACCGGCGACTGGATGCGCCTCAACAACGCCGTCATGGTGTTCGACCGGGGCCACCCGCTGCTCCGCGAGTTCATCGCTGAGTTCGCCGCCAAGTTCGACGGCAGCAAGTGGGGCCACAACGGGCCGTACCTCGTGTCGAGGGTGGCGGCGAGGTGGCGTCGCCGCCGGAGGCCGGAGGCGGAGGCTGACCTGACGGTGCTGCCGCCGGCGGCGTTCTACCCCGTCGACTGGAACAAGATCGGCGGGCTGTTCGTTGCACCCAAGGACAGGAAGGGCGAGAGGTGGGTGAAGGCCAAGGTTGAGAGCATCAAAGGTGAGAGCTTTGGCATCCATCTGTGGAACAGGGAGAGCAGGAGCCTGGAAATGGAGGAGGGCAGTGTGATTGGAAGGTTACTCTCAGACAGCTGCTTGTTCTGCAATTCCTCCATGTTTGCAAAGTATGAATAGTTGCACAAATGCAAAGAGATAACGAGATTGGAATATGTGGGATGTCAGACAAAATGTACATCTTCACTTGGCAGGTAAGCAATGACAAAATAACAGTGGCTTTGCACTTGTAAGATTTTGTCGGCACGGCAAAAAAAAAAAAATATGTATATGAAGCTATGCTAATCTTTGACTCACAGAGTCACAGTGCACTTTCAGTAAATAATTAATTTGACAGAA]
[+] EMBL AU101452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCGGCGACTGGATGAGCCTCAACAACGCCGTCATGGTGTTCGACCGGGGCCACCCGCT NTCCGCGAGTTCATCGCTGAGTTCGCCGCCAAGTTCGACGGCAGCAAGTGGGGCCACAACGGGCCGTACCTCGTGTCGAGGGTGGCGGCGAGGTGGCGTCGCCGCCGGAGGCCGGAGGCGGAGGCTGA CTGACGGTGCTGCC CCGGCGGCGTTCTACCCCGTCGACTGGAACAAGATCGGCGGGCTGTTCGTTGCACCCAAGGACAGGAAGGGCGAGAGGTGGGTGAAGGCCAAGGTTGAGAGCATCAAAGGTGAGAGCTTTGGCATCCATCTGTGGAACAGGGAGAGCAGGAGCCTGGAAATGGAGGAGGGCAGTGTGATTGGAAGGTTACTCTCAGACAGCTGCTTGTTCTGCAATTCCTCCATGTTTGCAAAGTATGAATAGTTGCACAAATGCAAAGAGATAACGAGATTGGAATATGTGGGATGTCAGACAAAATGTACATCTTCACTTGGCAGGTAAGCAATGACAAAATAACAGTGGCTTTGCACTTGTAAGATTTTGTCGGCACGGCAAAAA                                                                                    ]




>consensus_4184#0
AATTGGAGAGAATGCATGACAGCACACCACACATTGACACCACTGAGGCAGGCAGTGCCT
CTCCAAAACAAAACGCCACAAAACTAGCAAGTGTGCTTAAAGAAAAATTTTAACCTATCG
GCGAGCATTGTGCTTGTGTTGTGCAGCGGCACACGCTGATAGCGCGCTCTCCCTTCCCCT
GCTTCGAAGGGTCCACGCAGAAAATCCCTTGGCTCCAAGAGGCAGGCGCCCGGTGCACGT
ACGTACAGTGGCGCCAGTTGCCACCAAGGCGAACGCATGGCGCCTGCTCCTCCTCCTCCG
ACGATGGCGCCGCCGCCGACGCCGCGGAAGCCATTGCCATTGCTCCTCCTCTCCCTCTCC
CTCCCTTTCCTCCTCCTGCTTCTCTCCCTCGTCTTCCTCCTCTCGCACACCACCTTCAGC
CTCCTGCTCTGCCCACTCCTCCCGCGGCCAACTTCGAGGCCGAATGCCACGACGATGGCT
ACGACGACGGTGGCCGCTGCTCCTCCTACACTTGATGTATCCATGGACAAGTCGCTGCGA
GCCTTCCATGCATCGTCGCCGCCGCCGCCGACACCGACGACGACGACGACACCGACACCG
ACACCTCCTCTTCCGCCGCCGGCTCCTCCTGCTTCTCCTGCCAAGAGCAACAAGAAGGCG
TCCGCGAAGAGGAACAAGAGCCTCCTCAAGCTGCTGCTCAGGGAGACTCCCCGGACGCGG
CGGTTCGCGGCGCGCGCGGGCGAGCTCTTCGCCTCGCCGCGGCCGTGCACGCGGCGCTTT
TTCATGACGTGGCTCTCCCCGCTCGCGCGGTTCGGCCGCCGCGAGCTCCTCGTCGTGGAG
AGCCTCTTCAGGTCGCACCGCGACGCCTGCCTCCTCATCGCCTCCGACACCATGGACTCC
GACGGCGGCGGCGACAGGCTCGGCCCGTTCCTCGACCGCGGCCTCCGCGTCGCCGCCGCC
TCGCCGGACATGGCCTACCTCCTGAACGGCACGCCGGCGGAGGCGTGGCTGGGCGCGGTG
CAGCGCGGGGACGTCAGCCCCGGCAGCATCCCGCTCGGGCAGAACCTCTCCAACCTCCTC
CGCCTCGCCCTGCTCTACAAGTACGGCGGTGTCTACCTCGACGCCGACGTCGTCGTTCTC
AGGCCCTTCTCCGACCTCCGCAACGCCATCGGCGCGCAGGCCGTGGACGCGTCCACCGGC
GACTGGATGCGCCTCAACAACGCCGTCATGGTGTTCGACCGGGGCCACCCGCTGCTCCGC
GAGTTCATCGCTGAGTTCGCCGCCAAGTTCGACGGCAGCAAGTGGGGCCACAACGGGCCG
TACCTCGTGTCGAGGGTGGCGGCGAGGTGGCGTCGCCGCCGGAGGCCGGAGGCGGAGGCT
GACCTGACGGTGCTGCCGCCGGCGGCGTTCTACCCCGTCGACTGGAACAAGATCGGCGGG
CTGTTCGTTGCACCCAAGGACAGGAAGGGCGAGAGGTGGGTGAAGGCCAAGGTTGAGAGC
ATCAAAGGTGAGAGCTTTGGCATCCATCTGTGGAACAGGGAGAGCAGGAGCCTGGAAATG
GAGGAGGGCAGTGTGATTGGAAGGTTACTCTCAGACAGCTGCTTGTTCTGCAATTCCTCC
ATGTTTGCAAAGTATGAATAGTTGCACAAATGCAAAGAGATAACGAGATTGGAATATGTG
GGATGTCAGACAAAATGTACATCTTCACTTGGCAGGTAAGCAATGACAAAATAACAGTGG
CTTTGCACTTGTAAGATTTTGTCGGCACGGCAAAAAAAAAAAAATATGTATATGAAGCTA
TGCTAATCTTTGACTCACAGAGTCACAGTGCACTTTCAGTAAATAATTAATTTGACAGAA
clustalw multiple alignements is not computed in this case