cluster # 4196

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Oryza sativa
cluster # 4196 cluster # 4196 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4196#0 length = 2296 sequences # 3
consensusID : consensus_4196#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2296
fasta sequence
                              [CTTAGGCAACTGATTTTGGGTAGTGAATCGTATGGTTCAAGGCCCAGTTTCAGCATTGATGTTTGCAGTGATCGCCAAGTTCAACTGGTTTTGGAGGCAGCAAATCATATCTCTGATGACCTTGTACCTCTTGTTGTTCCGGACAAAGCTGGGACAGCTAGGGCAGTGCGTGTGATCTTCACTAGTTCTCCAGAGGATAAGAACCTTCTCCTGGTTTGTATCTCTTCAGATTGGCAGCATGTGCTTGTATAAAATAAAAGGAAGGTGTCACGTATTCAGGATCCGTTCTTATGGAAATCATTTTCAGATGGACATAAAAAAAATGGAGGATGAACATAATTTGAAGTTCCGTGGTTTTCGAGAAGTTATTGATCTACTATCATCTTCACAGAAACCAATTATATCTTATAATTTCTTGAATGATTTCACAATGATACACTCCAAATTTGTTGCACCTCTTCCACCAAACTTGCATGAATTCATGTGCTCCTTGAGGATGGTATTTTCTAATGTTATTGACATCAGTCACATGTGGAGAGAAATTGGCCCTTTGAGAAAAGCGAAGAATATACAAGGTGCTCTGAGTTACCTACAAAGACAATACTTTGTGCCGATGGATGTAGAAATACCTCAGCAAGATGGTAACAACAGTGTCACCAAAAGTGGGGAAAATGTTCTGAGAATAACAAAGTTGTTTGCTAAACTAAGTAATTTACTGAAAATCAGTCCCAATGGTCAAACTCACTCTGGTGATAAGTGTCACACAGTTGAGGAATATTCTTACATATTGTATCCGAGTTGTACGGCTGAAGAATCTGAAGATGATAAATCCAGTAATGAGTCAAATACCACCAGATCAGTGAGAACTGATAATGTTGTTTTCCTATGGGGGTTTAGGGAGACATCTGTCAAAGAACTGAGATCTCGCCTTGCAAGCTTGCATCATGCCTTCTCAAAAGATTTTGAGCTCAGATTATTGGATAACTCGTGCTCAGCTTTGATATTCCACAGTTCTGATACGGCAATAGATTTACTAAGAGAAATAAACTCGGAAAGTCCCTCTCTGAATAATTTCTTTTCGGAAGGCCTGAAAGCTGCAGGCTTTGATGCCTACAGGAAGGTTTGCAGGTCAGGGCTTTGGGATTCAGATTTAGCTGAGGCCCTGGATGGTGTTTCATCTGAACCATCTACTTCAACGCTTTCTGGGCGTGGCACCTCTGAGATATGCTGGAATACTTCGCTGATGCTAGATCTAAAGGAATATCTGGAACGCTAAACAACATATATTTTTATGGAAGTCGCCTCAGATTAATAAGAGTTTCCAGGTCTGATCAACCACAACCAGTCAGCATTGCTGGAATCTTCAGTTAAGCTCCTATGAGGAGAACATCACTTACACGATGATTATGTTGCTTGACTGACCATAAATGGGCAAGGTGTTTCTATTCGTGGCGCAATCATGTGGAACAGTGATATTGTTTTCAGCTTCAGCACAATGGTTGCTTACATTGCTTACTCCTCACCTGACATGGCATGACTACATTTTTCGTAATATCAGCTAACCCAGGTTTCTCTTGTCTTTACGGAGCTTCCACAGAAAACCCAGGCACTCCGAGGTGAAGGTCATCCTTGTACACAATCAGCTGGCCATTGCTTCGTTTGATGGACGACTTGCTGCTGAAGAGGAAATCAGTTACACCGACTCAGATCCCCACATGAGGACTACCTCACCGTATTCTGATCTCAAACGATTCGTAAAACTAGCCTTCTGTGGCCATGAGAGAGCAACGCAGGACTCTTCTATGACAACTAGCCAGTTGCAGCACGCATGGAATCGTCAAAGTCAGGTACTCAGGTGGGGAATTAGTATTGGAACCTAAGCCCGAAAGTCAGTCGGTCACAGCATTGTGAACGCATGCCATCGTGTTCCTGCCTAACCACATGGTGACTCCTGGCCTGTAGAGCAACACCGTGAACACAAGCAACGCCAAAGTCTCCTTTCGACATTATGTCCAGACATTTGCAGTGGGAAAAAAGTATGCTTTAATCTTTCCCTGCAGTGTTATCCCCTAACCAACCGAATGAAGAGACTGTTTCAAGTGACATGGTATCAAGGGAGTAAAAATTTGATGGAATAGAAGGCAATTTTAGTCGACTTTTCTGTTTAAGAACGGTCTGAAGAAGAAATATTTGTGCTCTCAGAGCATGAGCACTCCAGAAAAGAAACTAGATCTTTAGATCTTTGATGTGATACAAATTCTCATTTATAGATCGTGAGATGGTTATTTTCTCCTTT]

[+] EMBL AK121617             [CTTAGGCAACTGATTTTGGGTAGTGAATCGTATGGTTCAAGGCCCAGTTTCAGCATTGATGTTTGCAGTGATCGCCAAGTTCAACTGGTTTTGGAGGCAGCAAATCATATCTCTGATGACCTTGTACCTCTTGTTGTTCCGGACAAAGCTGGGACAGCTAGGGCAGTGCGTGTGATCTTCACTAGTTCTCCAGAGGATAAGAACCTTCTCCTGGTTTGTATCTCTTCAGATTGGCAGCATGTGCTTGTATAAAATAAAAGGAAGGTGTCACGTATTCAGGATCCGTTCTTATGGAAATCATTTTCAGATGGACATAAAAAAAATGGAGGATGAACATAATTTGAAGTTCCGTGGTTTTCGAGAAGTTATTGATCTACTATCATCTTCACAGAAACCAATTATATCTTATAATTTCTTGAATGATTTCACAATGATACACTCCAAATTTGTTGCACCTCTTCCACCAAACTTGCATGAATTCATGTGCTCCTTGAGGATGGTATTTTCTAATGTTATTGACATCAGTCACATGTGGAGAGAAATTGGCCCTTTGAGAAAAGCGAAGAATATACAAGGTGCTCTGAGTTACCTACAAAGACAATACTTTGTGCCGATGGATGTAGAAATACCTCAGCAAGATGGTAACAACAGTGTCACCAAAAGTGGGGAAAATGTTCTGAGAATAACAAAGTTGTTTGCTAAACTAAGTAATTTACTGAAAATCAGTCCCAATGGTCAAACTCACTCTGGTGATAAGTGTCACACAGTTGAGGAATATTCTTACATATTGTATCCGAGTTGTACGGCTGAAGAATCTGAAGATGATAAATCCAGTAATGAGTCAAATACCACCAGATCAGTGAGAACTGATAATGTTGTTTTCCTATGGGGGTTTAGGGAGACATCTGTCAAAGAACTGAGATCTCGCCTTGCAAGCTTGCATCATGCCTTCTCAAAAGATTTTGAGCTCAGATTATTGGATAACTCGTGCTCAGCTTTGATATTCCACAGTTCTGATACGGCAATAGATTTACTAAGAGAAATAAACTCGGAAAGTCCCTCTCTGAATAATTTCTTTTCGGAAGGCCTGAAAGCTGCAGGCTTTGATGCCTACAGGAAGGTTTGCAGGTCAGGGCTTTGGGATTCAGATTTAGCTGAGGCCCTGGATGGTGTTTCATCTGAACCATCTACTTCAACGCTTTCTGGGCGTGGCACCTCTGAGATATGCTGGAATACTTCGCTGATGCTAGATCTAAAGGAATATCTGGAACGCTAAACAACATATATTTTTATGGAAGTCGCCTCAGATTAATAAGAGTTTCCAGGTCTGATCAACCACAACCAGTCAGCATTGCTGGAATCTTCAGTTAAGCTCCTATGAGGAGAACATCACTTACACGATGATTATGTTGCTTGACTGACCATAAATGGGCAAGGTGTTTCTATTCGTGGCGCAATCATGTGGAACAGTGATATTGTTTTCAGCTTCAGCACAATGGTTGCTTACATTGCTTACTCCTCACCTGACATGGCATGACTACATTTTTCGTAATATCAGCTAACCCAGGTTTCTCTTGTCTTTACGGAGCTTCCACAGAAAACCCAGGCACTCCGAGGTGAAGGTCATCCTTGTACACAATCAGCTGGCCATTGCTTCGTTTGATGGACGACTTGCTGCTGAAGAGGAAATCAGTTACACCGACTCAGATCCCCACATGAGGACTACCTCACCGTATTCTGATCTCAAACGATTCGTAAAACTAGCCTTCTGTGGCCATGAGAGAGCAACGCAGGACTCTTCTATGACAACTAGCCAGTTGCAGCACGCATGGAATCGTCAAAGTCAGGTACTCAGGTGGGGAATTAGTATTGGAACCTAAGCCCGAAAGTCAGTCGGTCACAGCATTGTGAACGCATGCCATCGTGTTCCTGCCTAACCACATGGTGACTCCTGGCCTGTAGAGCAACACCGTGAACACAAGCAACGCCAAAGTCTCCTTTCGACATTATGTCCAGACATTTGCAGTGGGAAAAAAGTATGCTTTAATCTTTCCCTGCAGTGTTATCCCCTAACCAACCGAATGAAGAGACTGTTTCAAGTGACATGGTATCAAGGGAGTAAAAATTTGATGGAATAGAAGGCAATTTTAGTCGACTTTTCTGTTTAAGAACGGTCTGAAGAAGAAATATTTGTGCTCTCAGAGCATGAGCACTCCAGAAAAGAAACTAGATCTTTAGATCTTTGATGTGATACAAATTCTCATTTATAGATCGTGAGATGGT             ]
[+] EMBL CA998249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCAGCACAATGGTTGCTTACATTGCTTACTCCTCACCTGACATGGCATGACTACATTTTTCGTAATATCAGCTAACCCAGGTTTCTCTTGTCTTTACGGAGCTTCCACAGAAAACCCAGGCACTCCGAGGTGAAGGTCATCCTTGTACACAATCAGCTGGCCATTGCTTCGTTTGATGGACGACTTGCTGCTGAAGAGGAAATCAGTTACACCGACTCAGATCCCCACATGAGGACTACCTCACCGTATTCTGATCTCAAACGATTCGTAAAACTAGCCTTCTGTGGCCATGAGAGAGCAACGCAGGACTCTTCTATGACAACTAGCCAGTTGCAGCACGCATGGAATCGTCAAAGTCAGGTACTCAGGTGGGGAATTAGTATTGGAACCTAAGCCCGAAAGTCAGTCGGTCACAGCATTGTGAACGCATGCCATCGTGTTCCTGCCTAACCACATGGTGACTCCTGGCCTGTAGAGCAACACCGTGAACACAAGCAACGCCAAAGTCTCCTTTCGACATTATGTCCAGACATTTGCAGTGGGAAAAAAGTATGCTTTAATCTTTCCCTGCAGTGTTATCCCC                                                                                                                                                                                                                                  ]
[+] EMBL CA764068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACGACTTGCTGCTGAAGAGGAAATCAGTTACACCGACTCAGATCCCCACATGAGGACTACCTCACCGTATTCTGATCTCAAACGATTCGTAAAACTAGCCTTCTGTGGCCATGAGAGAGCAACGCAGGACTCTTCTATGACAACTAGCCAGTTGCAGCACGCATGGAATCGTCAAAGTCAGGTACTCAGGTGGGGAATTAGTATTGGAACCTAAGCCCGAAAGTCAGTCGGTCACAGCATTGTGAACGCATGCCATCGTGTTCCTGCCTAACCACATGGTGACTCCTGGCCTGTAGAGCAACACCGTGAACACAAGCAACGCCAAAGTCTCCTTTCGACATTATGTCCAGACATTTGCAGTGGGAAAAAAGTATGCTTTAATCTTTCCCTGCAGTGTTATCCCCTAACCAACCGAGTGAAGAGACTGTTTCAAGTGACATGGTATCAAGGGAGTAAAAATTTGATGGAATAGAAGGCAATTTTAGTCGACTTTTCTGTTTAAGAACGGTCTGAAGAAGAAATATTTGTGCTCTCAGAGCATGAGCACTCCAGAAAAGAAACTAGATCTTTAGATCTTTGATGTGATACAAATTCTCATTTATAGATCGTGAGATGGNTATTTTCTCCTTT]




>consensus_4196#0
CTTAGGCAACTGATTTTGGGTAGTGAATCGTATGGTTCAAGGCCCAGTTTCAGCATTGAT
GTTTGCAGTGATCGCCAAGTTCAACTGGTTTTGGAGGCAGCAAATCATATCTCTGATGAC
CTTGTACCTCTTGTTGTTCCGGACAAAGCTGGGACAGCTAGGGCAGTGCGTGTGATCTTC
ACTAGTTCTCCAGAGGATAAGAACCTTCTCCTGGTTTGTATCTCTTCAGATTGGCAGCAT
GTGCTTGTATAAAATAAAAGGAAGGTGTCACGTATTCAGGATCCGTTCTTATGGAAATCA
TTTTCAGATGGACATAAAAAAAATGGAGGATGAACATAATTTGAAGTTCCGTGGTTTTCG
AGAAGTTATTGATCTACTATCATCTTCACAGAAACCAATTATATCTTATAATTTCTTGAA
TGATTTCACAATGATACACTCCAAATTTGTTGCACCTCTTCCACCAAACTTGCATGAATT
CATGTGCTCCTTGAGGATGGTATTTTCTAATGTTATTGACATCAGTCACATGTGGAGAGA
AATTGGCCCTTTGAGAAAAGCGAAGAATATACAAGGTGCTCTGAGTTACCTACAAAGACA
ATACTTTGTGCCGATGGATGTAGAAATACCTCAGCAAGATGGTAACAACAGTGTCACCAA
AAGTGGGGAAAATGTTCTGAGAATAACAAAGTTGTTTGCTAAACTAAGTAATTTACTGAA
AATCAGTCCCAATGGTCAAACTCACTCTGGTGATAAGTGTCACACAGTTGAGGAATATTC
TTACATATTGTATCCGAGTTGTACGGCTGAAGAATCTGAAGATGATAAATCCAGTAATGA
GTCAAATACCACCAGATCAGTGAGAACTGATAATGTTGTTTTCCTATGGGGGTTTAGGGA
GACATCTGTCAAAGAACTGAGATCTCGCCTTGCAAGCTTGCATCATGCCTTCTCAAAAGA
TTTTGAGCTCAGATTATTGGATAACTCGTGCTCAGCTTTGATATTCCACAGTTCTGATAC
GGCAATAGATTTACTAAGAGAAATAAACTCGGAAAGTCCCTCTCTGAATAATTTCTTTTC
GGAAGGCCTGAAAGCTGCAGGCTTTGATGCCTACAGGAAGGTTTGCAGGTCAGGGCTTTG
GGATTCAGATTTAGCTGAGGCCCTGGATGGTGTTTCATCTGAACCATCTACTTCAACGCT
TTCTGGGCGTGGCACCTCTGAGATATGCTGGAATACTTCGCTGATGCTAGATCTAAAGGA
ATATCTGGAACGCTAAACAACATATATTTTTATGGAAGTCGCCTCAGATTAATAAGAGTT
TCCAGGTCTGATCAACCACAACCAGTCAGCATTGCTGGAATCTTCAGTTAAGCTCCTATG
AGGAGAACATCACTTACACGATGATTATGTTGCTTGACTGACCATAAATGGGCAAGGTGT
TTCTATTCGTGGCGCAATCATGTGGAACAGTGATATTGTTTTCAGCTTCAGCACAATGGT
TGCTTACATTGCTTACTCCTCACCTGACATGGCATGACTACATTTTTCGTAATATCAGCT
AACCCAGGTTTCTCTTGTCTTTACGGAGCTTCCACAGAAAACCCAGGCACTCCGAGGTGA
AGGTCATCCTTGTACACAATCAGCTGGCCATTGCTTCGTTTGATGGACGACTTGCTGCTG
AAGAGGAAATCAGTTACACCGACTCAGATCCCCACATGAGGACTACCTCACCGTATTCTG
ATCTCAAACGATTCGTAAAACTAGCCTTCTGTGGCCATGAGAGAGCAACGCAGGACTCTT
CTATGACAACTAGCCAGTTGCAGCACGCATGGAATCGTCAAAGTCAGGTACTCAGGTGGG
GAATTAGTATTGGAACCTAAGCCCGAAAGTCAGTCGGTCACAGCATTGTGAACGCATGCC
ATCGTGTTCCTGCCTAACCACATGGTGACTCCTGGCCTGTAGAGCAACACCGTGAACACA
AGCAACGCCAAAGTCTCCTTTCGACATTATGTCCAGACATTTGCAGTGGGAAAAAAGTAT
GCTTTAATCTTTCCCTGCAGTGTTATCCCCTAACCAACCGAATGAAGAGACTGTTTCAAG
TGACATGGTATCAAGGGAGTAAAAATTTGATGGAATAGAAGGCAATTTTAGTCGACTTTT
CTGTTTAAGAACGGTCTGAAGAAGAAATATTTGTGCTCTCAGAGCATGAGCACTCCAGAA
AAGAAACTAGATCTTTAGATCTTTGATGTGATACAAATTCTCATTTATAGATCGTGAGAT
GGTTATTTTCTCCTTT
clustalw multiple alignements is not computed in this case