Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4224 cluster # 4224       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4224#0 length = 1053 sequences # 3  

consensusID : consensus_4224#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1053
fasta sequence
                              [GCTCCAATTCTCCCCCACCCGCAACCGCGTCCTCCTCCATCCTTCCCGGCGAAGCGATCCACCGGCGGCGAGGCGCGTCAGCTCTCACCCGAGGAGCTCAGCCCCACCGGCGCGGGCGCGCGCGCGCGCGGCGAGGATGGACTACGACTACCGGGGCAGGCCGGGCTCCGGATCCTACGGCGGCGGCGTCGGCGGCGGCGGGGGGTCGTCGTCCCTCTACCCGCGCGTCGGCCAGCCCTCCCACGGCGTCGCCAACGCGCCCCCGCCGGAGCCGCCGCGGGCCGCGCCGTACCACCACCATGGCCCCCCCACCGTCTCCGCGGCTCCGCACCCCGTCCCCGCCTCGTCCTCCACATCGATGGGCATACAAGTTGTGATAAAGCCAGCATATCGGATAACCCCTCCTCCTCAGTTGCCGCCACAGCTTACAGAAATTCCTCGCAGTACCTTCAATTTTGATTTTGAGTATGAAAGGAAAATTCTTGCTGAGGCTGAGAAGGAGAACCCCAACTGGAGCAAGTTTGTGATAGAGAGTCAGCCACCACCACCACCACAG-CCGCCAAGAGGCCCAAAACTCACAACTCCCACTACTTCTGTGGCTACTCCAGGGGATCCAGTTGTGGACAAGTATATATCCATGGGGCTTGGACGTGAAGCTGTCTCATTTGCTGTGTTGAACTATGGAGATAATCCAGCGAAGGTGAAGGAGTTTGTGAAATCCTACAACGCTCTCCACGAGATGGGCTTCACATCCTCAAATGTTCCCGAACTGCTGGCCATCCACGACAACGACCCTGACAAAGTTATCCAGCACCTGATCGGCACATCATAGTCCAGAACAAAACTCTCCACATATTCCCCCATGTATAGGTCCATCTTACGCTGGCAAGCGCCATACATGTCGCGTTTTTAATGATGGTTTCGAGTGCTAGCTATTGTACGCGTATTTCCGCTACGAGTTTCATGAACTGACTATTGTTGTGCTTCCCAAGCGGTTTCATAAACTTAACCTTGCTTTTTGTGTCGGATATATAGAGCCAGTAGGTGATGATT]

[+] EMBL AK121877             [GCTCCAATTCTCCCCCACCCGCAACCGCGTCCTCCTCCATCCTTCCCGGCGAAGCGATCCACCGGCGGCGAGGCGCGTCAGCTCTCACCCGAGGAGCTCAGCCCCACCGGCGCGGGCGCGCGCGCGCGCGGCGAGGATGGACTACGACTACCGGGGCAGGCCGGGCTCCGGATCCTACGGCGGCGGCGTCGGCGGCGGCGGGGGGTCGTCGTCCCTCTACCCGCGCGTCGGCCAGCCCTCCCACGGCGTCGCCAACGCGCCCCCGCCGGAGCCGCCGCGGGCCGCGCCGTACCACCACCATGGCCCCCCCACCGTCTCCGCGGCTCCGCACCCCGTCCCCGCCTCGTCCTCCACATCGATGGGCATACAAGTTGTGATAAAGCCAGCATATCGGATAACCCCTCCTCCTCAGTTGCCGCCACAGCTTACAGAAATTCCTCGCAGTACCTTCAATTTTGATTTTGAGTATGAAAGGAAAATTCTTGCTGAGGCTGAGAAGGAGAACCCCAACTGGAGCAAGTTTGTGATAGAGAGTCAGCCACCACCACCACCACAG CCGCCAAGAGGCCCAAAACTCACAACTCCCACTACTTCTGTGGCTACTCCAGGGGATCCAGTTGTGGACAAGTATATATCCATGGGGCTTGGACGTGAAGCTGTCTCATTTGCTGTGTTGAACTATGGAGATAATCCAGCGAAGGTGAAGGAGTTTGTGAAATCCTACAACGCTCTCCACGAGATGGGCTTCACATCCTCAAATGTTCCCGAACTGCTGGCCATCCACGACAACGACCCTGACAAAGTTATCCAGCACCTGATCGGCACATCATAGTCCAGAACAAAACTCTCCACATATTCCCCCATGTATAGGTCCATCTTACGCTGGCAAGCGCCATACATGTCGCGTTTTTAATGATGGTTTCGAGTGCTAGCTATTGTACGCGTATTTCCGCTACGAGTTTCATGAACTGACTATTGTTGTGCTTCCCAAGCGGTTTCATAAACTTAACCTTGCTTTTTGTGTCGGATATATAGAGCCAGTAGGTGATGATT]
[+] EMBL CA756213             [             CCCACCCGCAACCGCGTCCTCCTCCATCCTTCCCGGCGAAGCGATCCACCGGCGGCGAGGCGCGTCAGCTCTCACCCGAGGAGCTCAGCCCCACCGGCGCGGGCGCGCGCGCGCGCGGCGAGGATGGACTACGACTACCGGGGCAGGCCGGGCTCCGGATCCTACGGCGGCGGCGTCGGCGGCGGCGGGGGGTCGTCGTCCCTCTACCCGCGCGTCGGACAGTCCTCCCACGGCGTCGCCAACGCGCCCCCGCCGGAGCCGCCGCGGGCCGCGCCGTACCACCACCATGGCCCCCCCACCGTCTCCGCGGATCCGCACCCCGTCCCCGCCTCGTCCTCCACATCGATGGGCATACAAGTTGTGATAAAGCCAGCATATCGGATAACCCCTCCTCCTCAGATGCCGACACAGCTTAAAGAAATCCCTCGCAGTACCTTCAATTTTGGATTTGAGTATGAAAGGAAAATTCTTGCTGAAGCTGAGAAAGAAAACCCCCACTGGAGCAAGGTTGTGATAGAGAGTCAAGCACCACCACCACCACAGCCCCCCAACAGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA998961             [                                                                                                                                                                                                                                                                                                                                       GCACCCCGTCCCCGCCTCGTCCTCCACATCGATGGGCATACAAGTTGTGATAAAGCCAGCATATCGGATAACCCCTCCTCCTCAGTTGCCGCCACAGCTTACAGAAATTCCTCGCAGTACCTTCAATTTTGATTTTGAGTATGAAAGGAAAATTCTTGCTGAGGCTGAGAAGGAGAACCCCAACTGGAGCAAGTTTGTGATAGAGAGTCAGCCACCACCACCACCACAG CCGCCAAGAGGCCCAAAACTCACAACTCCCACTACTTCTGTGGCTACTCCAGGGGATCCAGTTGTGGACAAGTATATATCCATGGGGCTTGGACGTGAAGCTGTCTCATTTGCTGTGTTGAACT                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_4224#0 GCTCCAATTCTCCCCCACCCGCAACCGCGTCCTCCTCCATCCTTCCCGGCGAAGCGATCC ACCGGCGGCGAGGCGCGTCAGCTCTCACCCGAGGAGCTCAGCCCCACCGGCGCGGGCGCG CGCGCGCGCGGCGAGGATGGACTACGACTACCGGGGCAGGCCGGGCTCCGGATCCTACGG CGGCGGCGTCGGCGGCGGCGGGGGGTCGTCGTCCCTCTACCCGCGCGTCGGCCAGCCCTC CCACGGCGTCGCCAACGCGCCCCCGCCGGAGCCGCCGCGGGCCGCGCCGTACCACCACCA TGGCCCCCCCACCGTCTCCGCGGCTCCGCACCCCGTCCCCGCCTCGTCCTCCACATCGAT GGGCATACAAGTTGTGATAAAGCCAGCATATCGGATAACCCCTCCTCCTCAGTTGCCGCC ACAGCTTACAGAAATTCCTCGCAGTACCTTCAATTTTGATTTTGAGTATGAAAGGAAAAT TCTTGCTGAGGCTGAGAAGGAGAACCCCAACTGGAGCAAGTTTGTGATAGAGAGTCAGCC ACCACCACCACCACAGCCGCCAAGAGGCCCAAAACTCACAACTCCCACTACTTCTGTGGC TACTCCAGGGGATCCAGTTGTGGACAAGTATATATCCATGGGGCTTGGACGTGAAGCTGT CTCATTTGCTGTGTTGAACTATGGAGATAATCCAGCGAAGGTGAAGGAGTTTGTGAAATC CTACAACGCTCTCCACGAGATGGGCTTCACATCCTCAAATGTTCCCGAACTGCTGGCCAT CCACGACAACGACCCTGACAAAGTTATCCAGCACCTGATCGGCACATCATAGTCCAGAAC AAAACTCTCCACATATTCCCCCATGTATAGGTCCATCTTACGCTGGCAAGCGCCATACAT GTCGCGTTTTTAATGATGGTTTCGAGTGCTAGCTATTGTACGCGTATTTCCGCTACGAGT TTCATGAACTGACTATTGTTGTGCTTCCCAAGCGGTTTCATAAACTTAACCTTGCTTTTT GTGTCGGATATATAGAGCCAGTAGGTGATGATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)