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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4240 cluster # 4240       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4240#0 length = 357 sequences # 3  

consensusID : consensus_4240#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 357
fasta sequence
                              [TGGTTCCATTGCTTGCAAGAACTTGATGCATGCGGCTTGAACAAGAATGAACAAAGATTTGTCGTGAGCTTGTGAGGCTAGTAGAACAAGGTGACAAGAAGAGCCTATCGAAGTATAAGCAAGATTTCTGGGGAGGACTGGGAAGTATAGAAAAGGCACAGGGAGGAAATGGTCTTGTTGAGTTTTGAGCAGAAAACATCAATTATAGAGGAGTGTGGCAAGGAGATATGTTAAGGAGATGGGCAAGAAGGGAGGCT--GGATCAC-TGCACTCAAGAAGGCTTTCACCTCTGGCCCTAAGGACAAGCCTACAAATGGGGCAGCTGGTAGCGCAGTACTCTCACCAGCACAGGAGCGGCG]

[+] EMBL OSS1657A             [TGGTTCCATTGCTTGCAAGAACTTGATGCATGCGGCTTGAACAAGAATGAACAAAGATTTGTCGTGAGCTTGTGAGGCTAGTAGAACAAGGTGACAAGAAGAGCCTATCGAAGTATAAGCAAGATTTCTGGGGAGGACTGGGAAGTATAGAAAAGGCACAGGGAGGAAATGGTCTTGTTGAGTTTTGAGCAGAAAACATCAATTATAGAGGAGTGTGGCAAGGAGATATGTTAAGGAGATGGGCAAGAAGGGAGGCT  GGATCACTTGCACTCAAGAAGGCTTTCACCTCTGGCCCTAAGGACAAGCCTACAAATGGGGCAGCTGGTAGCGCAGTACTCTCACCAGCACAGGAGCGGCG]
[+] EMBL AU064232             [TGGTTCCATTGCTTGCAAGAACTTGATGCATGCGGCTTGAACAAGAATGAACAAAGATTTGTCGTGAGCTTGTGAGGCTAGTAGAACAAGGTGACAAGAAGAGCCTATCGAAGTATAAGCNAGATTTCTGGGGAGGACTGGGAAGTATAGANNAGGCACAGGGAGGAAATGGTCTTGTTGAGTTTTGAGCAGAAAACATCAATTATAGAGGAGTGTGGCAAGGAGATATGTTAAGGAGATGGGCAAGAAGGGAGGCT  GGTTCAC TGCACTCAAGANGGCTTTCACCTCTGGCCCTAAGGACATGCCTACAAATGGGGCAGCTTGTAGCGCAGTACTCTNACCca             ]
[+] EMBL OSS1386A             [TGGTTCCATTGCTTGCAAGAACTTGATGCATGCGGCTTGAACAAGAATGAACAAAGATTTGTCGTGAGCTTGTGAGGCTAGTAGAACAAGGTGACAAGAAGAGCCTATCGAAGTATAAGCAAGATTTCTGGGGAGGACTGGGAAGTATAGAAAAGGCACAGGGAGGAAATGGTCTTGTTGAGTTTTGAGCAGAAAACATCAATTATAGAGGAGTGTGGCAAGGAGATATGTTAAGGAGATGGGCAAGAAGGGAGGCTTGGGATCAC TGCACTCAAGAAGGCTTTCACCTCT                                                                    ]


>consensus_4240#0 TGGTTCCATTGCTTGCAAGAACTTGATGCATGCGGCTTGAACAAGAATGAACAAAGATTT GTCGTGAGCTTGTGAGGCTAGTAGAACAAGGTGACAAGAAGAGCCTATCGAAGTATAAGC AAGATTTCTGGGGAGGACTGGGAAGTATAGAAAAGGCACAGGGAGGAAATGGTCTTGTTG AGTTTTGAGCAGAAAACATCAATTATAGAGGAGTGTGGCAAGGAGATATGTTAAGGAGAT GGGCAAGAAGGGAGGCTGGATCACTGCACTCAAGAAGGCTTTCACCTCTGGCCCTAAGGA CAAGCCTACAAATGGGGCAGCTGGTAGCGCAGTACTCTCACCAGCACAGGAGCGGCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)