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Oryza sativa
cluster # 4241 cluster # 4241       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4241#0 length = 2392 sequences # 1  
consensus_4241#1 length = 1555 sequences # 2  

consensusID : consensus_4241#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2392
fasta sequence
                              [TTTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGATCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAAGTGACTTGGTGGGTCTAAACTATGTGTTCCTGAAGTTTACGGATGGCATATCTGATAAAAAGTCAGCACCAGTTTCGTATCTTGCATGTAAGGCGGGAGGACATATGTGACAAAATGGCCTTCAGGACAAGCATTGTGAGTATTGTATTGCCTTCCCTTTGTATCTTGTCTATGGTGGTAATTTGACCTTCAGCAGCCAAAATACTTAACGGTTGTTTGGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGTCATGGATTGTGAGTTTGAGATGAGGATTGAGCTTCTTAGGAACTGAAAAGGACATGATGATTGTCTGTACTATTATTGTTAATCAGCATAGTTTCCATTGGATGTAAGTTAGCATCAATCTTATTGTTCAGACAGCTCTTCTCTGAGCCTATTGTCGAACAATGCAAGATCTCAGTTTTGATAACTGTACGCTACACTATGAGCTATTGCTCACTCATCTGCAACATCTGATTGATTTGGGATTTTATGGGTTTTCTGTTGTCATATTGCAACTAAAGTTTCTTTTCAAGGTGATTTTACCTGTTCACATTTTTGTGCATCTTCTGTAATGTGATTATGTGAACCAAATATTCTAGTTCGCCCTACCATGTAAATGAAGTAATGCCATGCATTTCAAGTCTCCAAGTCCTGCCCATGATCTTCAATATTGTGAGGGTAAGACTTCTTCACATTTCACAACTACAAATTCATGGTCATGTGTAAGTTACTTTCAAACATGAATATTTCCATACCGATTGTGAATCAAATCACAAACATACTGTACGTATTGCTGCATTTACTATATCTGACTTTGAAAATGTTCAAGTGGCATTTGGTTCTGTGATCAATGTACTTTGTCCTCAATGAATTTTCCTTTGTCATGAGCACCTGACTTGTCTTTCTGTTGAATACCGGCACAGCGCGTATTGACAATTCACCGATTCAGGCTGTGTTATGAAGACGGAGCACCGGATTATACAAGTAGTCAGGCACTGTTATTCTGTGAAGCTGACTTTCACTGATCCATCCACCGACGCATCATCAGAATTGATAAGGAGGAGCATCTGTTCTGTTCTGTAGTTTAACAGGCCCACCCAGATCTGATTCATTTGATTACCTTTCGTTTTCAGATGAAACCATCTGGCACCTGCGATCCAAAGAGGCCTTGAAAGCTGGTCCATGTTTATCTTCAGAAACCAGAATAACAAGTCCATGGCTTA]

[+] EMBL AK106455             [TTTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGATCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAAGTGACTTGGTGGGTCTAAACTATGTGTTCCTGAAGTTTACGGATGGCATATCTGATAAAAAGTCAGCACCAGTTTCGTATCTTGCATGTAAGGCGGGAGGACATATGTGACAAAATGGCCTTCAGGACAAGCATTGTGAGTATTGTATTGCCTTCCCTTTGTATCTTGTCTATGGTGGTAATTTGACCTTCAGCAGCCAAAATACTTAACGGTTGTTTGGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGTCATGGATTGTGAGTTTGAGATGAGGATTGAGCTTCTTAGGAACTGAAAAGGACATGATGATTGTCTGTACTATTATTGTTAATCAGCATAGTTTCCATTGGATGTAAGTTAGCATCAATCTTATTGTTCAGACAGCTCTTCTCTGAGCCTATTGTCGAACAATGCAAGATCTCAGTTTTGATAACTGTACGCTACACTATGAGCTATTGCTCACTCATCTGCAACATCTGATTGATTTGGGATTTTATGGGTTTTCTGTTGTCATATTGCAACTAAAGTTTCTTTTCAAGGTGATTTTACCTGTTCACATTTTTGTGCATCTTCTGTAATGTGATTATGTGAACCAAATATTCTAGTTCGCCCTACCATGTAAATGAAGTAATGCCATGCATTTCAAGTCTCCAAGTCCTGCCCATGATCTTCAATATTGTGAGGGTAAGACTTCTTCACATTTCACAACTACAAATTCATGGTCATGTGTAAGTTACTTTCAAACATGAATATTTCCATACCGATTGTGAATCAAATCACAAACATACTGTACGTATTGCTGCATTTACTATATCTGACTTTGAAAATGTTCAAGTGGCATTTGGTTCTGTGATCAATGTACTTTGTCCTCAATGAATTTTCCTTTGTCATGAGCACCTGACTTGTCTTTCTGTTGAATACCGGCACAGCGCGTATTGACAATTCACCGATTCAGGCTGTGTTATGAAGACGGAGCACCGGATTATACAAGTAGTCAGGCACTGTTATTCTGTGAAGCTGACTTTCACTGATCCATCCACCGACGCATCATCAGAATTGATAAGGAGGAGCATCTGTTCTGTTCTGTAGTTTAACAGGCCCACCCAGATCTGATTCATTTGATTACCTTTCGTTTTCAGATGAAACCATCTGGCACCTGCGATCCAAAGAGGCCTTGAAAGCTGGTCCATGTTTATCTTCAGAAACCAGAATAACAAGTCCATGGCTTA]


>consensus_4241#0 TTTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAG GTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTC GGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGC CTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGC CTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTC CCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCC GACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTC GCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCG CCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGGCCTCTTCGCCTGC AACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAG ATCACCCGCGCCGTCGGCCGAATCAAGATCGGGCTCCAGACCAAGGTCTTCCTCGGCAAC CTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATG CTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAG GAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATT GACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCC AGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTT GATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGAT CCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTG CATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAAC CATCGGTGTTTCCTTGAGGTAAGTGACTTGGTGGGTCTAAACTATGTGTTCCTGAAGTTT ACGGATGGCATATCTGATAAAAAGTCAGCACCAGTTTCGTATCTTGCATGTAAGGCGGGA GGACATATGTGACAAAATGGCCTTCAGGACAAGCATTGTGAGTATTGTATTGCCTTCCCT TTGTATCTTGTCTATGGTGGTAATTTGACCTTCAGCAGCCAAAATACTTAACGGTTGTTT GGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGTCATGGATTGTGAGTTTGAGATGAGGATT GAGCTTCTTAGGAACTGAAAAGGACATGATGATTGTCTGTACTATTATTGTTAATCAGCA TAGTTTCCATTGGATGTAAGTTAGCATCAATCTTATTGTTCAGACAGCTCTTCTCTGAGC CTATTGTCGAACAATGCAAGATCTCAGTTTTGATAACTGTACGCTACACTATGAGCTATT GCTCACTCATCTGCAACATCTGATTGATTTGGGATTTTATGGGTTTTCTGTTGTCATATT GCAACTAAAGTTTCTTTTCAAGGTGATTTTACCTGTTCACATTTTTGTGCATCTTCTGTA ATGTGATTATGTGAACCAAATATTCTAGTTCGCCCTACCATGTAAATGAAGTAATGCCAT GCATTTCAAGTCTCCAAGTCCTGCCCATGATCTTCAATATTGTGAGGGTAAGACTTCTTC ACATTTCACAACTACAAATTCATGGTCATGTGTAAGTTACTTTCAAACATGAATATTTCC ATACCGATTGTGAATCAAATCACAAACATACTGTACGTATTGCTGCATTTACTATATCTG ACTTTGAAAATGTTCAAGTGGCATTTGGTTCTGTGATCAATGTACTTTGTCCTCAATGAA TTTTCCTTTGTCATGAGCACCTGACTTGTCTTTCTGTTGAATACCGGCACAGCGCGTATT GACAATTCACCGATTCAGGCTGTGTTATGAAGACGGAGCACCGGATTATACAAGTAGTCA GGCACTGTTATTCTGTGAAGCTGACTTTCACTGATCCATCCACCGACGCATCATCAGAAT TGATAAGGAGGAGCATCTGTTCTGTTCTGTAGTTTAACAGGCCCACCCAGATCTGATTCA TTTGATTACCTTTCGTTTTCAGATGAAACCATCTGGCACCTGCGATCCAAAGAGGCCTTG AAAGCTGGTCCATGTTTATCTTCAGAAACCAGAATAACAAGTCCATGGCTTA



consensusID : consensus_4241#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1555
fasta sequence
                              [TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATGGCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCGTCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTACCGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGTGTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTGCAAAGAAATGTGTAGTTATGTGTCTTACTATGAAACAAGATTTGTCCTTCTGTATCGTGGATCGATGCCATCTCTATTCTCTTAGCACTTTGTAACATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC]

[+] EMBL AK061097             [TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATGGCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCGTCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTACCGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGTGTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTGCAAAGAAATGTGTAGTTATGTGTCTTACTATGAAACAAGATTTGTCCTTCTGTATCGTGGATCGATGCCATCTCTATTCTCTTAGCACTTTGTAACATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC]
[+] EMBL AK073547             [TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATGGCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCGTCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGGCAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTCATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCACTCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCCTCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACCGGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAGGCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTCCACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTACCGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGCCGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGGCTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGGGACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTCGCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGGCTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGACAGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGGTTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAGGTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATATGGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTGTCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGTGTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGA                                                                                                                                            ]


>consensus_4241#1 TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATG GCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCG TCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGG CAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTC ATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCAC TCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCC TCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCC CAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACC GGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAG GCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTC CACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTAC CGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGC CGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGG CTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGG GACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTC GCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGG CTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGAC AGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGG TTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAG GTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATAT GGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTG TCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGGAATAAGGAGT GTTGCTGTTTGATCGATCCTATAGTGCTTTTCATTACGTTTTACTATGTCATATTGCTGT GTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTGCAAAGAAATGTGTAGT TATGTGTCTTACTATGAAACAAGATTTGTCCTTCTGTATCGTGGATCGATGCCATCTCTA TTCTCTTAGCACTTTGTAACATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4241#0      ------------------------------------------------------------
consensus_4241#1      TTTCCTCCTCGCCTCGCCTCGCCTCGTCCCCCACCCACCAGATCTAAGCAGGTTGAAATG 60
                                                                                  

consensus_4241#0      ----------------------------TTTCCTCCCCCTTCCAC----CCGCGCTCCC- 27
consensus_4241#1      GCCACGACGCAGCACTCCAACGGCGGCGCCGCCGGCGACAACGGCGAGGCCGCGCCGCCG 120
                                                     **  *  *  *  *    ******  ** 

consensus_4241#0      CCTACGCCGCCGCCAAGGTCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGG 87
consensus_4241#1      TCGGTTCCGCCCTCCCTCGCGCCGCCGCGGAAGGTGGCCCTGGTGACGGGCATCACGGGG 180
                       *    *****  *     *****************************************

consensus_4241#0      CAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTC 147
consensus_4241#1      CAGGACGGGAGCTACCTGACGGAGCTGCTCCTCGGCAAGGGCTACGAGGTGCACGGCCTC 240
                      ************************************************************

consensus_4241#0      ATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCAC 207
consensus_4241#1      ATCCGCCGCTCCTCCAACTTCAACACCCAGCGCCTCGACCATATCTACCACGACCCGCAC 300
                      ************************************************************

consensus_4241#0      TCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCC 267
consensus_4241#1      TCCCAGCCGTCGACGCCGCGCCCCCCGATGCGCCTCCACTACGCTGACCTCTCCGACTCC 360
                      ************************************************************

consensus_4241#0      TCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCC 327
consensus_4241#1      TCCTCCCTCCGCCGCGCGCTCGACCACATCCTCCCCGACGAGGTCTACAACCTCGCCGCC 420
                      ************************************************************

consensus_4241#0      CAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACC 387
consensus_4241#1      CAGTCCCACGTCGCCGTCTCCTTCGAGGTCCCCGACTACACCGCCGACGTCACCGCCACC 480
                      ************************************************************

consensus_4241#0      GGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAG 447
consensus_4241#1      GGCGCGCTCCGCCTCCTCGAGGCCGTGCGCCTCGCCAGCAAGCGCATCCGCTACTACCAG 540
                      ************************************************************

consensus_4241#0      GCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTC 507
consensus_4241#1      GCGGGGTCCTCCGAGATGTTCGGCTCCACGCCGCCGCCGCAGAGCGAGTCCTCCCCCTTC 600
                      ************************************************************

consensus_4241#0      CACCCGCGCTCCCCCTACG----------------------------------------- 526
consensus_4241#1      CACCCGCGCTCCCCCTACGCCGCCGCCAAGGTCGCCGCCCACTGGTACACCGTCAACTAC 660
                      *******************                                         

consensus_4241#0      -------------GCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGC 573
consensus_4241#1      CGCGAGGCCTACGGCCTCTTCGCCTGCAACGGCGTGCTCTTCAACCACGAATCCCCACGC 720
                                   ***********************************************

consensus_4241#0      CGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGATCGGG 633
consensus_4241#1      CGCGGCGAGAACTTCGTCACCCGCAAGATCACCCGCGCCGTCGGCCGAATCAAGGTCGGG 780
                      ****************************************************** *****

consensus_4241#0      CTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGG 693
consensus_4241#1      CTCCAGACCAAGGTCTTCCTCGGCAACCTCTCCGCCGCCAGGGACTGGGGATTCGCCGGG 840
                      ************************************************************

consensus_4241#0      GACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTC 753
consensus_4241#1      GACTACGTCGAGGCAATGTGGCGCATGCTGCAGCAGGACAAGCCCGGCGACTACGTCGTC 900
                      ************************************************************

consensus_4241#0      GCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGG 813
consensus_4241#1      GCCACCGAGGAGTCCCACACCGTCGAGGAGTTCCTCCAGGCCGCCTTCGGCTATGCAGGG 960
                      ************************************************************

consensus_4241#0      CTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGAC 873
consensus_4241#1      CTCAACTGGAAGGATCATGTAGTCATTGACAAGAAGTACTTCCGCCCCGCCGAGGTGGAC 1020
                      ************************************************************

consensus_4241#0      AGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGG 933
consensus_4241#1      AGCCTCCAGGGGGATGCAACCAAGGCCAGGAAGGAGCTTGGGTGGAAGCCCAAGGTCGGG 1080
                      ************************************************************

consensus_4241#0      TTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAG 993
consensus_4241#1      TTCCAGCAGCTCGTCGAGATGATGGTTGATAACGACATTGAGCTTGCCAAGAAGGAGAAG 1140
                      ************************************************************

consensus_4241#0      GTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATAT 1053
consensus_4241#1      GTCCTCGTCGATGCCGGGTACCGTGATCCCAAGCAGCAGCCATAGAATTGGCTACCATAT 1200
                      ************************************************************

consensus_4241#0      GGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTG 1113
consensus_4241#1      GGTTTGGTTCTTGGGAGATTGGGGTTGCATTATTACCTAGAAACTGATACATTGTGGCTG 1260
                      ************************************************************

consensus_4241#0      TCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAAGTGACTTGGTG 1173
consensus_4241#1      TCACAGAAGAGGTGGGCTCAAGTTAACCATCGGTGTTTCCTTGAGGTAGG-AATAAGGAG 1319
                      ************************************************ *  *   ** *

consensus_4241#0      GGTCTAAACTATGTGTTCCTGAAGTTTACGGATGGCATATCTGATAAAAAGTCAGCACCA 1233
consensus_4241#1      TGTT---GCTGTTTGATC---GATCCTA----TAGTGCTTTTCATTACGTTTTA----CT 1365
                       **     ** * ** **    *   **    * *    * * ** *    * *    * 

consensus_4241#0      GTTTCGTATCTTGCATGTAAGGCGGGAGGACATATGTGACAAAATGGCCTTCAGGACAAG 1293
consensus_4241#1      ATGTCATAT-TGCTGTGTCCTCTTAACAGATAATAATAATAAACGAGTCGATGCCATTTG 1424
                       * ** *** *    ***          ** *    * * ***   * *      *   *

consensus_4241#0      CATTGTGAGTATTGTATTGCCTTCCCTTTGTATCTTGTCTATGGTGGTA-ATTTGACCTT 1352
consensus_4241#1      CA----AAGAAATGTGTAGT------TATGTGTCTTA-CTATGAAACAAGATTTGTCCTT 1473
                      **     ** * *** * *       * *** ****  *****     * ***** ****

consensus_4241#0      CAGCAGCCAAAATACTTAACGGTTGTTTGGCGGGGTTTTGGTTTTCTTTGGTGTCCCTGT 1412
consensus_4241#1      CTGTATC--------------GTGGATCGATGCCATCTCTATTCTCTTAGCACTTTGTAA 1519
                      * * * *              ** * * *  *   * *   ** **** *   *   *  

consensus_4241#0      CATGGATTGTGAGTTTGAGATGAGGATTGAGCTTCTTAGGAACTGAAAAGGACATGATGA 1472
consensus_4241#1      CATGTGGTTAGTGCACAATTGGAAAAATGAATCTTC------------------------ 1555
                      ****   *  * *    *   **  * ***   *                          

consensus_4241#0      TTGTCTGTACTATTATTGTTAATCAGCATAGTTTCCATTGGATGTAAGTTAGCATCAATC 1532
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      TTATTGTTCAGACAGCTCTTCTCTGAGCCTATTGTCGAACAATGCAAGATCTCAGTTTTG 1592
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      ATAACTGTACGCTACACTATGAGCTATTGCTCACTCATCTGCAACATCTGATTGATTTGG 1652
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      GATTTTATGGGTTTTCTGTTGTCATATTGCAACTAAAGTTTCTTTTCAAGGTGATTTTAC 1712
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      CTGTTCACATTTTTGTGCATCTTCTGTAATGTGATTATGTGAACCAAATATTCTAGTTCG 1772
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      CCCTACCATGTAAATGAAGTAATGCCATGCATTTCAAGTCTCCAAGTCCTGCCCATGATC 1832
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      TTCAATATTGTGAGGGTAAGACTTCTTCACATTTCACAACTACAAATTCATGGTCATGTG 1892
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      TAAGTTACTTTCAAACATGAATATTTCCATACCGATTGTGAATCAAATCACAAACATACT 1952
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      GTACGTATTGCTGCATTTACTATATCTGACTTTGAAAATGTTCAAGTGGCATTTGGTTCT 2012
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      GTGATCAATGTACTTTGTCCTCAATGAATTTTCCTTTGTCATGAGCACCTGACTTGTCTT 2072
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      TCTGTTGAATACCGGCACAGCGCGTATTGACAATTCACCGATTCAGGCTGTGTTATGAAG 2132
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      ACGGAGCACCGGATTATACAAGTAGTCAGGCACTGTTATTCTGTGAAGCTGACTTTCACT 2192
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      GATCCATCCACCGACGCATCATCAGAATTGATAAGGAGGAGCATCTGTTCTGTTCTGTAG 2252
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      TTTAACAGGCCCACCCAGATCTGATTCATTTGATTACCTTTCGTTTTCAGATGAAACCAT 2312
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      CTGGCACCTGCGATCCAAAGAGGCCTTGAAAGCTGGTCCATGTTTATCTTCAGAAACCAG 2372
consensus_4241#1      ------------------------------------------------------------
                                                                                  

consensus_4241#0      AATAACAAGTCCATGGCTTA 2392
consensus_4241#1      --------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)