These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2031 fasta sequence [TCATTCCGTTTTTCCCGCGAAATCCTTCTTCTCGTCGGGCGATTCGCCGCTAATATCAACTCTATCCTTCTCCAAATTTTTCTTTTTTTTTCCCAGTGGTGGTGTTACACTGACAGCTCGCTCGCCAGTTGACGCTTCCACGGAAGGCGCAGCAGAGTAGCCGGCTAAGCCGCCGCCGCCATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCCAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCACGATTGTGCTACCCTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCCCTGCACGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACATACAGCCACGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAATATCAGGTGATCATTTCAGTTAGGAGTAGGTCTTTTTTCACTTATTG-CCAATAAAGAACGTCACGGAGTGAGCT-GGACAGTTGCAGGACAGAAA-CG-CCATTCAA-CAGGAG-ATCACATGCATCAACAACATTA-GGA-GTTTCACT-GCTC-GTTTTTGTCAAGAATCTGCAGATATTTTTTTTTC-GTTTCTCCAATAAGTTAGTTTACAGAAATTTTACTTCCCAGATGAGAAGTGTAAACTTTCAGAAAACATTGTACAAGTGTAAATTTTACTACCTCTTGAGCATTGCCTCATCTAATCAATTTGAGAGCATC] [+] EMBL CB676139 [TCATTCCGTTTTTCCCGCGAAATCCTTCTTCTCGTCGGGCGATTCGCCGCTAATATCAACTCTATCCTTCTCCAAATTTTTCTTTTTTTTTCCCAGTGGTGGTGTTACACTGACAGCTCGCTCGCCAGTTGACGCTTCCACGGAAGGCGCAGCAGAGTAGCCGGCTAAGCCGCCGCCGCCATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCCAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCACGATTGTGCTACCCTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCCCTGCACGAAGACCAAATGTACAAAATGTAACCTTACT ] [+] EMBL AK122015 [ TGTTACACTGACAGCTCGCTCGCCAGTTGACGCTTCCACGGAAGGCGCAGCAGAGTAGCCGGCTAAGCCGCCGCCGCCATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCAAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCACACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCAGGATTGTGCAACACTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCGCTGCAGGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACATACAGCCACGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAATATCAGGTGATCATTTCAGTTAGGAGTAGGTCTTTTTTCACTTATTG CCAATAAAGAACGTCACGGAGTGAGCT GGACAGTTGCAGGACAGAAA CG CCATTCAA CAGGAG ATCACATGCATCAACAACATTA GGA GTTTCACT GCTC GTTTTTGTCAAGAATCTGCAGATATTTTTTTTTC GTTTCTCCAATAAGTTAGTTTACAGAAATTTTACTTCCCAGATGAGAAGTGTAAACTTTCAGAAAACATTGTACAAGTGTAAATTTTACTACCTCTTGAGCATTGCCTCATCTAATCAATTTGAGAGCATC] [+] EMBL AU166625 [ TTCTACACCACAGCCGGTGTCAGCTTCGGAACANACAGCCCCGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCAAACACTGNACCTGTAAAACCACTGGAAGCATCTGCATAAAATCAGGTGATCATTTCAGTTAGGAGTAGGTCTTTTTTCACTTATTGCCCAAAAAAGAACGTCTCGGAGTGAGCTGGGNCAGGTTCAGGNCANAAACCGNCCATCNAACCAGGAGAATCCCATGCATCAACAACATTAGGGAGGTTTCACTGGCTCGGTTTTTGTCAAGAATCTGCAGATATTTTTTTTTCGGTTTCTCCAATAAGTTAG TTACAGAAATTTTACTTCCCAGATGAGAAGTGTAAACTTTCAGAAAACATTGTACAAGTGTAAATTTTACTACCTCTTGAGCATTGCCTCATCTAATCAAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||