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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4257 cluster # 4257       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4257#0 length = 733 sequences # 3  

consensusID : consensus_4257#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 733
fasta sequence
                              [TTACAAACCATTTATTGAGATGCAAAAGACCGTATACATTATTGAGCTAAACTTTTTTTGTAATATTCGATCCCTCACTCAGTACACATTAGACCACTGTACTACACATATATAAACCCATGCAGGAATAATTCTTCCACACTTGACCTAGCTTTTCATGGAACATTAGTATATATAGTACTAGCTAACACTGCAACACATGTGTATTAGCTCACGCAAGAATATTATTCCCTCCAACTTTGCATATGTACCCAAGTGTATGTAGCTAGCTATAGCTAGCACTGATCTTCCTCCATGCTCCGGGGAGTGATCTGGAAGAAGTGGTCCCAGGTGTAGCGGAAGCTGACGGTGGCCATGCTGGCGATCGGCCCGCCGCCGTTCACCAGGTAGTAGTCGCCGCCGTCGTCGGCGGCGCGGAACACGGCCGGGTCGACCTCCACCGTCGTCGCGAAGCCGCCGCCGTCGAGCCGGACGTCCCTGACGCTGCAGCCGCACAGGTTCTTCACCTGCACCTCGAACACCGTGTCGCCGCCGCCGGCCGCGGCCTCGCCGGTGTTGATGGTCTGCACATCGATGCTGCTCGACGCGGCGCAGCGATCGGCCCCATTTGTCCCTTGAACGGAGACGACGATGAAGAGGAGAGCAATGAGAAGGTTGAGAGGAGTGGCCATATATGTTCTTCCTTTGGGAGACCAAGCGAGCTAAGCTAGTGGTGTTAGCTTTGTATGTTGGT]

[+] EMBL CB682844             [TTACAAACCATTTATTGAGATGCAAAAGACCGTATACATTATTGAGCTAAACTTTTTTTGTAATATTCGATCCCTCACTCAGTACACATTAGACCACTGTACTACACATATATAAACCCATGCAGGAATAATTCTTCCACACTTGACCTAGCTTTTCATGGAACATTAGTATATATAGTACTAGCTAACACTGCAACACATGTGTATTAGCTCACGCAAGAATATTATTCCCTCCAACTTTGCATATGTACCCAAGTGTATGTAGCTAGCTATAGCTAGCACTGATCTTCCTCCATGCTCCGGGGAGTGATCTGGAAGAAGTGGTCCCAGGTGTAGCGGAAGCTGACGGTGGCCATGCTGGCGATCGGCCCGCCGCCGTTCACCAGGTAGTAGTCGCCGCCGTCGTCGGCGGCGCGGAACACGGCCGGGTCGACCTCCACCGTCGTCGCGAAGCCGCCGCCGTCGAGCCGGACGTCCCTGACGCTGCAGCCGCACAGGTTCTTCACCTGCACCTCGAACACCGTGTCGCCGCCGCCGGCCGCGGCCTCGCCGGTGTTGATGGTCTGCACATCGATGCTGCTCGACGCGGCGCAGCGATCGGCCCCATTTGTCCCTTGAACGGAGACGACGATGAAGAGGAGAGCAATGACAAGGTTGAGAGGAGTGGCCATATATGTTCTTCCTTTGGGAGACCAAGCGAGCTAAGCTAGTGGTGTTAGCTTTGTATGTTGGT]
[-] EMBL AK107976             [                GAGATGCAAAAGACCGTATACATTATTGAGCTAAACTTTTTTTGTAATATTCGATCCCTCACTCAGTACACATTAGACCACTGTACTACACATATATAAACCCATGCAGGAATAATTCTTCCACACTTGACCTAGCTTTTCATGGAACATTAGTATATATAGTACTAGCTAACACTGCAACACATGTGTATTAGCTCACGCAAGAATATTATTCCCTCCAACTTTGCATATGTACCCAAGTGTATGTAGCTAGCTATAGCTAGCACTGATCTTCCTCCATGCTCCGGGGAGTGATCTGGAAGAAGTGGTCCCAGGTGTAGCGGAAGCTGACGGTGGCCATGCTGGCGATCGGCCCGCCGCCGTTCACCAGGTAGTAGTCGCCGCCGTCGTCGGCGGCGCGGAACACGGCCGGGTCGACCTCCACCGTCGTCGCGAAGCCGCCGCCGTCGAGCCGGACGTCCCTGACGCTGCAGCCGCACAGGTTCTTCACCTGCACCTCGAACACCGTGTCGCCGCCGCCGGCCGCGGCCTCGCCGGTGTTGATGGTCTGCACATCGATGCTGCTCGACGCGGCGCAGCGATCGGCCCCATTTGTCCCTTGAACGGAGACGACGATGAAGAGGAGAGCAATGAGAAGGTTGAGAGGAGTG                                                                   ]
[-] EMBL CB682843             [                   ATGCAAAAGACCGTATACATTATTGAGCTAAACTTTTTTTGTAATATTCGATCCCTCACTCAGTACACATTAGACCACTGTACTACACATATATAAACCCATGCAGGAATAATTCTTCCACACTTGACCTAGCTTTTCATGGAACATTAGTATATATAGTACTAGCTAACACTGCAACACATGTGTATTAGCTCACGCAAGAATATTATTCCCTCCAACTTTGCATATGTACCCAAGTGTATGTAGCTAGCTATAGCTAGCACTGATCTTCCTCCATGCTCCGGGGAGTGATCTGGAAGAAGTGGTCCCAGGTGTAGCGGAAGCTGACGGTGGCCATGCTGGCGATCGGCCCGCCGCCGTTCACCAGGTAGTAGTCGCCGCCGTCGTCGGCGGCGCGGAACACGGCCGGGTCGACCTCCACCGTCGTCGCGAAGCCGCCGCCGTCGAGCCGGACGTCCCTGACGCTGCAGCCGCACAGGTTCTTCACCTGCACCTCGAACACCGTGTCGCCGCCGCCGGCCGCGGCCTCGCCGGTGTTGATGGTCTGCACATCGATGCTGCTCGACGCGGCGCAGCGATCGGCCCCATTTGTCCCTTGAACGGAGACGACGATGAAGAGGAGAGCAATGAGAAGGTTGAGAGGAGTGGCCATATATGTTCTTCCTTTGGGAGACCAAGCGAGCTAAGCTAGTGGTGTTAGCTTTGT        ]


>consensus_4257#0 TTACAAACCATTTATTGAGATGCAAAAGACCGTATACATTATTGAGCTAAACTTTTTTTG TAATATTCGATCCCTCACTCAGTACACATTAGACCACTGTACTACACATATATAAACCCA TGCAGGAATAATTCTTCCACACTTGACCTAGCTTTTCATGGAACATTAGTATATATAGTA CTAGCTAACACTGCAACACATGTGTATTAGCTCACGCAAGAATATTATTCCCTCCAACTT TGCATATGTACCCAAGTGTATGTAGCTAGCTATAGCTAGCACTGATCTTCCTCCATGCTC CGGGGAGTGATCTGGAAGAAGTGGTCCCAGGTGTAGCGGAAGCTGACGGTGGCCATGCTG GCGATCGGCCCGCCGCCGTTCACCAGGTAGTAGTCGCCGCCGTCGTCGGCGGCGCGGAAC ACGGCCGGGTCGACCTCCACCGTCGTCGCGAAGCCGCCGCCGTCGAGCCGGACGTCCCTG ACGCTGCAGCCGCACAGGTTCTTCACCTGCACCTCGAACACCGTGTCGCCGCCGCCGGCC GCGGCCTCGCCGGTGTTGATGGTCTGCACATCGATGCTGCTCGACGCGGCGCAGCGATCG GCCCCATTTGTCCCTTGAACGGAGACGACGATGAAGAGGAGAGCAATGAGAAGGTTGAGA GGAGTGGCCATATATGTTCTTCCTTTGGGAGACCAAGCGAGCTAAGCTAGTGGTGTTAGC TTTGTATGTTGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)