cluster # 4321

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Oryza sativa
cluster # 4321 cluster # 4321 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4321#0 length = 1855 sequences # 3
consensusID : consensus_4321#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1855
fasta sequence
                              [ACTGCTCGTCTCATCACTCTCCACCTCTCTCCCTCTCTCTCTCTTCCTCGCGCTCCCACGCCACGCAGCAGCCGCAGATCTCCACCCGCCTCCGGCGAGCCCGCCGCCGCCGCCGCCGCCATGGAGTACGAGCGCATCGAGAAGCCGTTCCCCACCCAGGGCGGTGGGTTCTCGCCGAAGCGGCTGCGCGCGATGTTGCTGGGGGTGGAGAAGCGGCGGAAGGGGCAGGAGGAGGAGGAGGAGGGGGACGCCGGGGAGGTGGACGACGAGTACGGCGCGGTGCCCAAGTCCTCTGTCAGATCCGACGCCGACTCCGATGCGCGCAGAGGAGGTAGCATGTGCGAAGAATACAAGGATGTAGATGTGGTGAGCACCATCTCAGAATCTTCATCCTCGTTGGAGACAGGGAGTGGGCACCGATCGCGTGACACCCACTCCATGGGTTCACGAGTAAGGGTGCCTGAGGAGGACTCCTGTGACTCTGAGAGTGTGGCTTCAAACTTTGAGTTCCATAAGGAGCGAGGGGCCTCTGCTCGGTCTGTGACGGCGGCAATCGTTCCTCCATTCTCAAAGCCTGCACCATCAAAGTGGGACGATGCCCAGAAATGGATCGCCAGCCCGACAACAAACCGTCCTGGTAGGGCTGGTGGAGTGCCACAGAGGAAGATGGAAAAAACTAGCTTTGGTGGCGGGAGGCTGCCGGCTACGAAGGTTGTGTTGGAGGCCACAGAGGAGATAGATACTAAGAGGGTTGATCCAAGCCAAGAGAAAAGGGAAATTGGGTGGCAAAAAGCGGTGAATTGGGCCCCACCTGATCCATATCCAGAAGTTGAGACTTGTGCAAAGTCTGCACTTGCTGAAGAAATTACAGTAGCTGATTCAGCTGTTACTTTTAGTCGCCATGATTCATCTGCCACGCTTCAGAGCGCGACAACATGCATACCTCCCCCACCAACAGTCCGATCAGTGTCAATGAGAGACATGGGTACAGAAATGACCCCTATTGCGAGCCAGGAGCCATCCCGAACAGGAACACCGGTGAGAGCAACGAGTCCAGATTGTTCTCGCCCAACTACTCCACGAAAAACAATAGGCCCCAATGCAATCGGTGCTGTTATTGGCCATGGTGAATGTAGCAACGTGGAATTAAGTGAACAAGAATTGCAAATGAAGACTAGGAGGGAGATAATGCTCCTCGGCACTCAGCTTGGTAAAACCAACATTGCTGCATGGGCAAGCAACAAGGAAGAGGAAAAAGATGCATCACTTTCGCTTAAAGGAGTGCCCATGGACCAATCTACACAGAAGGTAACAGAAATTCGTGCAGCAGCGTGGGAGGAGGCAGAGAAGGCTAAATATTTAGCAAGATTTAAACGAGAAGAGATTAAGATCCAAGCATGGGAAGATCATCAGAGAGCAAAAATCGAAGCTGAAATGAGAAAAATTGAGGTCGACGTGGAAAGGATGCGAGCCCGTGCGCAGGACAAGCTGATGAGCCAGC-TCGCATCGGCGAGACACACTGCCGACGAGAAGCGGGCCGCGGCGGAGCTGAAACGGAGCCGTGCGGCTGCAAAGACGGCGGAGCAGGCAGACCACATCAGGAGAACCGGCAGGATGCCGTCCTCCATTGGCTGCTGGAACTGGTGCTCGTAGTAGCGTAGCT-AAGCTCAAGCAACTGAAGCAAGCAAAAAGCTCTCCTCACTATGTCTCGCAAGAC-TTGAAGCGCCATCATCTGTTTTTACCGTGATCTTGTAGAATATTGTCTTTTGATTGGTTTCAGTAGATATAAGTCAGAAGAAGACGAGTCACTTGTAAGTAACTATGGAGCAGTATATAAGATGCAAGCTTCTTGCCT]

[+] EMBL AK102604             [ACTGCTCGTCTCATCACTCTCCACCTCTCTCCCTCTCTCTCTCTTCCTCGCGCTCCCACGCCACGCAGCAGCCGCAGATCTCCACCCGCCTCCGGCGAGCCCGCCGCCGCCGCCGCCGCCATGGAGTACGAGCGCATCGAGAAGCCGTTCCCCACCCAGGGCGGTGGGTTCTCGCCGAAGCGGCTGCGCGCGATGTTGCTGGGGGTGGAGAAGCGGCGGAAGGGGCAGGAGGAGGAGGAGGAGGGGGACGCCGGGGAGGTGGACGACGAGTACGGCGCGGTGCCCAAGTCCTCTGTCAGATCCGACGCCGACTCCGATGCGCGCAGAGGAGGTAGCATGTGCGAAGAATACAAGGATGTAGATGTGGTGAGCACCATCTCAGAATCTTCATCCTCGTTGGAGACAGGGAGTGGGCACCGATCGCGTGACACCCACTCCATGGGTTCACGAGTAAGGGTGCCTGAGGAGGACTCCTGTGACTCTGAGAGTGTGGCTTCAAACTTTGAGTTCCATAAGGAGCGAGGGGCCTCTGCTCGGTCTGTGACGGCGGCAATCGTTCCTCCATTCTCAAAGCCTGCACCATCAAAGTGGGACGATGCCCAGAAATGGATCGCCAGCCCGACAACAAACCGTCCTGGTAGGGCTGGTGGAGTGCCACAGAGGAAGATGGAAAAAACTAGCTTTGGTGGCGGGAGGCTGCCGGCTACGAAGGTTGTGTTGGAGGCCACAGAGGAGATAGATACTAAGAGGGTTGATCCAAGCCAAGAGAAAAGGGAAATTGGGTGGCAAAAAGCGGTGAATTGGGCCCCACCTGATCCATATCCAGAAGTTGAGACTTGTGCAAAGTCTGCACTTGCTGAAGAAATTACAGTAGCTGATTCAGCTGTTACTTTTAGTCGCCATGATTCATCTGCCACGCTTCAGAGCGCGACAACATGCATACCTCCCCCACCAACAGTCCGATCAGTGTCAATGAGAGACATGGGTACAGAAATGACCCCTATTGCGAGCCAGGAGCCATCCCGAACAGGAACACCGGTGAGAGCAACGAGTCCAGATTGTTCTCGCCCAACTACTCCACGAAAAACAATAGGCCCCAATGCAATCGGTGCTGTTATTGGCCATGGTGAATGTAGCAACGTGGAATTAAGTGAACAAGAATTGCAAATGAAGACTAGGAGGGAGATAATGCTCCTCGGCACTCAGCTTGGTAAAACCAACATTGCTGCATGGGCAAGCAACAAGGAAGAGGAAAAAGATGCATCACTTTCGCTTAAAGGAGTGCCCATGGACCAATCTACACAGAAGGTAACAGAAATTCGTGCAGCAGCGTGGGAGGAGGCAGAGAAGGCTAAATATTTAGCAAGATTTAAACGAGAAGAGATTAAGATCCAAGCATGGGAAGATCATCAGAGAGCAAAAATCGAAGCTGAAATGAGAAAAATTGAGGTCGACGTGGAAAGGATGCGAGCCCGTGCGCAGGACAAGCTGATGAGCCAGC TCGCATCGGCGAGACACACTGCCGACGAGAAGCGGGCCGCGGCGGAGCTGAAACGGAGCCGTGCGGCTGCAAAGACGGCGGAGCAGGCAGACCACATCAGGAGAACCGGCAGGATGCCGTCCTCCATTGGCTGCTGGAACTGGTGCTCGTAGTAGCGTAGCT AAGCTCAAGCAACTGAAGCAAGCAAAAAGCTCTCCTCACTATGTCTCGCAAGAC TTGAAGCGCCATCATCTGTTTTTACCGTGATCTTGTAGAATATTGTCTTTTGATTGGTTTCAGTAGATATAAGTCAGAAGAAGACGAGTCACTTGTAAGTAACTATGGAGCAGTATATAAGATGCAAGCTTCTTGCCT]
[+] EMBL BE040229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCCCGGGCTGAGCCATATCCAGAAGTTGAGACTTGTGCAAAGTCTGCACTTGCTGAAGAAATTACAGTAGCTGATTCAGCTGTTACTTTTAGTCGCCATGATTCATCTGCCACGCTTCAGAGCGCGACAACATGCATACCTCCCCCACCAACAGTCCGATCAGTGTCAATGAGAGACATGGGTACAGAAATGACCCCTATTGCGAGCCAGGAGCCATCCCGAACAGGAACACCGGTGAGAGCAACGAGTCCAGATTGTAGTCGCCCAACTACTCCACGAAAAACAATAGGCCCCAATGCAATTGGTGCTGTTATTGGCCATGGTGAATGTAGCAACGTGGAATTAAGTGAACAAGAATTGCAAATGAAGACTAGGAGGGAGATAATGCTCCTCGGCACTCAGCTTGGTAAAACCAACATTGCTGCATGGGCAAGCAAGAAGGAAGAGGAAAAAGATGCATCACTTTCGCTTAAAGGAGTGCCCATGGACCAATCTACACAGAAGGTAACAGANATTCGTGCAGCAGCGTGGGAGGAGGCANAGAAGGCTAAATATTTAGCAAGATTTAAACGAGAAGAGATTAAGATCCAAGCATGGGAAGATCATCAGAGAGCAAAAATCGAAGCTGAAATGAGAAAAATTGAGGTCGACGTGGAAAGGATGCGAGCCCGTGCGCAAGACAAGCTGATGAGCCANCATC CATCTGCGAGACAC CTGCCGACGAGAAGCGGGCTG GGCGGAGCTGAAACGGAAGCG GCGGGTGC AAGACGG GGAGCA GCCGA CACATCAGG GAACGGG                                                                                                                                                                                                                                                       ]
[+] EMBL C74788               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGCCCGTGCGCAGGACAAGCTGATGAGCCAGC TCGCATCGGCGAGACACACTGCCGACGAGAAGCGGGCCGCGGCGGA CTGAAACGGAGCCGTGCGNCTGCAAAGACGGCGGA CAGGCAGACCACATCAGGAGAACCGGCAGGATG CGTCCTCCATTGGCTGCTGGAACTGGTGCTCGTAGTAGCGTA CTAAAGCTCAAGCAACTGAAGCAAGCAAAAAGCTCTCCTCACTATGTCTCGCAAGACTTTGAAGCGCCATCATCTGTTTTTACCGTGATCTTGTAGAATATTGNCTTTTGATTGG NTCAGTAGATATAAGTCAG AGAANCCGAGTCCCTTnt                                          ]




>consensus_4321#0
ACTGCTCGTCTCATCACTCTCCACCTCTCTCCCTCTCTCTCTCTTCCTCGCGCTCCCACG
CCACGCAGCAGCCGCAGATCTCCACCCGCCTCCGGCGAGCCCGCCGCCGCCGCCGCCGCC
ATGGAGTACGAGCGCATCGAGAAGCCGTTCCCCACCCAGGGCGGTGGGTTCTCGCCGAAG
CGGCTGCGCGCGATGTTGCTGGGGGTGGAGAAGCGGCGGAAGGGGCAGGAGGAGGAGGAG
GAGGGGGACGCCGGGGAGGTGGACGACGAGTACGGCGCGGTGCCCAAGTCCTCTGTCAGA
TCCGACGCCGACTCCGATGCGCGCAGAGGAGGTAGCATGTGCGAAGAATACAAGGATGTA
GATGTGGTGAGCACCATCTCAGAATCTTCATCCTCGTTGGAGACAGGGAGTGGGCACCGA
TCGCGTGACACCCACTCCATGGGTTCACGAGTAAGGGTGCCTGAGGAGGACTCCTGTGAC
TCTGAGAGTGTGGCTTCAAACTTTGAGTTCCATAAGGAGCGAGGGGCCTCTGCTCGGTCT
GTGACGGCGGCAATCGTTCCTCCATTCTCAAAGCCTGCACCATCAAAGTGGGACGATGCC
CAGAAATGGATCGCCAGCCCGACAACAAACCGTCCTGGTAGGGCTGGTGGAGTGCCACAG
AGGAAGATGGAAAAAACTAGCTTTGGTGGCGGGAGGCTGCCGGCTACGAAGGTTGTGTTG
GAGGCCACAGAGGAGATAGATACTAAGAGGGTTGATCCAAGCCAAGAGAAAAGGGAAATT
GGGTGGCAAAAAGCGGTGAATTGGGCCCCACCTGATCCATATCCAGAAGTTGAGACTTGT
GCAAAGTCTGCACTTGCTGAAGAAATTACAGTAGCTGATTCAGCTGTTACTTTTAGTCGC
CATGATTCATCTGCCACGCTTCAGAGCGCGACAACATGCATACCTCCCCCACCAACAGTC
CGATCAGTGTCAATGAGAGACATGGGTACAGAAATGACCCCTATTGCGAGCCAGGAGCCA
TCCCGAACAGGAACACCGGTGAGAGCAACGAGTCCAGATTGTTCTCGCCCAACTACTCCA
CGAAAAACAATAGGCCCCAATGCAATCGGTGCTGTTATTGGCCATGGTGAATGTAGCAAC
GTGGAATTAAGTGAACAAGAATTGCAAATGAAGACTAGGAGGGAGATAATGCTCCTCGGC
ACTCAGCTTGGTAAAACCAACATTGCTGCATGGGCAAGCAACAAGGAAGAGGAAAAAGAT
GCATCACTTTCGCTTAAAGGAGTGCCCATGGACCAATCTACACAGAAGGTAACAGAAATT
CGTGCAGCAGCGTGGGAGGAGGCAGAGAAGGCTAAATATTTAGCAAGATTTAAACGAGAA
GAGATTAAGATCCAAGCATGGGAAGATCATCAGAGAGCAAAAATCGAAGCTGAAATGAGA
AAAATTGAGGTCGACGTGGAAAGGATGCGAGCCCGTGCGCAGGACAAGCTGATGAGCCAG
CTCGCATCGGCGAGACACACTGCCGACGAGAAGCGGGCCGCGGCGGAGCTGAAACGGAGC
CGTGCGGCTGCAAAGACGGCGGAGCAGGCAGACCACATCAGGAGAACCGGCAGGATGCCG
TCCTCCATTGGCTGCTGGAACTGGTGCTCGTAGTAGCGTAGCTAAGCTCAAGCAACTGAA
GCAAGCAAAAAGCTCTCCTCACTATGTCTCGCAAGACTTGAAGCGCCATCATCTGTTTTT
ACCGTGATCTTGTAGAATATTGTCTTTTGATTGGTTTCAGTAGATATAAGTCAGAAGAAG
ACGAGTCACTTGTAAGTAACTATGGAGCAGTATATAAGATGCAAGCTTCTTGCCT
clustalw multiple alignements is not computed in this case