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Oryza sativa
cluster # 4328 cluster # 4328       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4328#0 length = 1070 sequences # 3  

consensusID : consensus_4328#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1070
fasta sequence
                              [TTCCCCATCTGGCTCGCTCGACATCTTCTTCACTCCTCACTTCCCCCACTTTCTCTACTCCTAGCATAGCAGCCTCACTTTCCCTCCTCGATCGAAGCAGCAGGCGGAGGCGGAGGGGATCGGCGATGGAGCAGCAGGAGGAAGTGCCACCGCCGCCGGCGGGGCTGGGGCTGACGGCGGAGGAGTACGCGCAGGTGCGGGCGACGGTGGAGGCGCACCACCGCTACGCCGTGGGGCCGGGCCAATGCTCCTCCCTCCTCGCGCAGCGCATCCACGCGCCGCCCGCCGCCGTCTGGGCCGTCGTCCGCCGCTTCGACTGCCCCCAGGTGTACAAGCACTTCATCCGCAGCTGCGTCCTCCGGCCCGATCCCCACCACGACGACAACGGCAACGACCTCCGCCCCGGCCGCCTCCGCGAGGTCAGCGTCATCTCCGGCCTCCCCGCCAGCACCAGCACCGAGCGCCTCGACCTCCTCGACGACGCCCACCGCGTCTTCGGCTTCACCATCACCGGCGGCGAGCACCGCCTCCGCAACTACCGATCCGTCACCACCGTCTCCCAGCTCGACGAGATCTGCACCCTCGTCCTCGAGTCCTACATCGTCGACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCGACACCGTCATCAGGCTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACGCCGCTGCCGCCGCCGCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAGCCTTTTTCTTTTCTTTTTGGACCTCTCTGCAATTTCACTTCTATTCAGGGAGGTGCTTCGAATTTGCTCCATGTCTCATGAAGTTGGAGGAGGAAGGGTCAGCTTCTAATACATCTCATTCCTGGGGGTGCTGCCTGTAATAATCTCTTCATCTTCTTTTTTCCTCTCCTCCTCCTCTTCTCTTCCTGGATTTCTTTTGCTTGGAATTTTTACTTACCTTTGTGTGTGTGTCTCACTTCCTGATTGGAATCCATATTTGCTTTTCGGTGGTTTTGTTCTTCATTCAAATTCAAATTAATCTATCTA]

[+] EMBL AK061525             [TTCCCCATCTGGCTCGCTCGACATCTTCTTCACTCCTCACTTCCCCCACTTTCTCTACTCCTAGCATAGCAGCCTCACTTTCCCTCCTCGATCGAAGCAGCAGGCGGAGGCGGAGGGGATCGGCGATGGAGCAGCAGGAGGAAGTGCCACCGCCGCCGGCGGGGCTGGGGCTGACGGCGGAGGAGTACGCGCAGGTGCGGGCGACGGTGGAGGCGCACCACCGCTACGCCGTGGGGCCGGGCCAATGCTCCTCCCTCCTCGCGCAGCGCATCCACGCGCCGCCCGCCGCCGTCTGGGCCGTCGTCCGCCGCTTCGACTGCCCCCAGGTGTACAAGCACTTCATCCGCAGCTGCGTCCTCCGGCCCGATCCCCACCACGACGACAACGGCAACGACCTCCGCCCCGGCCGCCTCCGCGAGGTCAGCGTCATCTCCGGCCTCCCCGCCAGCACCAGCACCGAGCGCCTCGACCTCCTCGACGACGCCCACCGCGTCTTCGGCTTCACCATCACCGGCGGCGAGCACCGCCTCCGCAACTACCGATCCGTCACCACCGTCTCCCAGCTCGACGAGATCTGCACCCTCGTCCTCGAGTCCTACATCGTCGACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCGACACCGTCATCAGGCTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACGCCGCTGCCGCCGCCGCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAGCCTTTTTCTTTTCTTTTTGGACCTCTCTGCAATTTCACTTCTATTCAGGGAGGTGCTTCGAATTTGCTCCATGTCTCATGAAGTTGGAGGAGGAAGGGTCAGCTTCTAATACATCTCATTCCTGGTGGTGCTGCCTGTAATAATCTCTTCATCTTCTTTTTTCCTCTCCTCCTCCTCTTCTCTTCCTGGATTTCTTTTGCTTGGAATTTTTACTTACCTTTGTGTGTGTGTCTCACTTCCTGATTGGAATCCATATTTGCTTTTCGGTGGTTTTGTTCTTCATTCAAATTCAAATTAATCTATCTA]
[+] EMBL CA756539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCTCGTCCTCGAGTCCTACATCGTCGACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCGACACCGTCATCAGGCTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACGCCGCTGCCGCCGCCGCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAGCCTTTTTCTTTTCTTTTTGGACCTCTCTGCAATTTCACTTCTATTCAGGGAGGTGCTTCGAATTTGCTCCATGTCTCATGAAGTTGGAGGAGGAAGGGTCAGCTTCTAATACATCTCATTCCTGGGGGTGCTGCCTGTAATAATCTCTTCATCTTCTTTTTTCCTCTCCTCCTCCTCTTCTCTTCCTGGATTTCTTTTGCTTGGAATTTTTACTTACCTTTGTGTGTGTGTCTCACTTCCTGATTGGAATCCATATTTGCTTTTCGGTGGTTTTGTTCTTCAaaaaaaa                 ]
[+] EMBL BE607329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCTCGTCCTCGAGTCCTACATCGTCGACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCGACACCGTCATCAGGCTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACGCCGCTGCCGCCGCCGCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAGCCTTTTTCTTTTCTTTTTGGACCTCTCTGCAATTTCACTTCTATTCAGGGAGGTGCTTCGAATTTGCTCCATGTCTCATGAAGTTGGAGGAGGAAGGGTCAGCTTCTAATACATCTCATTCCTGGGGGTGCTGCCTGTAATAATCTCTTCATCTTCTTTTTTCCTCTCCTCCTCCTCTTCTCTTCCTGGATTTCTTTTGCTTGGAATTTTTACTTACCTTTGTGTGTGTGTCTCACTTCCTGATTGGAATCCATATTTGCTTTTCGGTGGTTTTGTT                             ]


>consensus_4328#0 TTCCCCATCTGGCTCGCTCGACATCTTCTTCACTCCTCACTTCCCCCACTTTCTCTACTC CTAGCATAGCAGCCTCACTTTCCCTCCTCGATCGAAGCAGCAGGCGGAGGCGGAGGGGAT CGGCGATGGAGCAGCAGGAGGAAGTGCCACCGCCGCCGGCGGGGCTGGGGCTGACGGCGG AGGAGTACGCGCAGGTGCGGGCGACGGTGGAGGCGCACCACCGCTACGCCGTGGGGCCGG GCCAATGCTCCTCCCTCCTCGCGCAGCGCATCCACGCGCCGCCCGCCGCCGTCTGGGCCG TCGTCCGCCGCTTCGACTGCCCCCAGGTGTACAAGCACTTCATCCGCAGCTGCGTCCTCC GGCCCGATCCCCACCACGACGACAACGGCAACGACCTCCGCCCCGGCCGCCTCCGCGAGG TCAGCGTCATCTCCGGCCTCCCCGCCAGCACCAGCACCGAGCGCCTCGACCTCCTCGACG ACGCCCACCGCGTCTTCGGCTTCACCATCACCGGCGGCGAGCACCGCCTCCGCAACTACC GATCCGTCACCACCGTCTCCCAGCTCGACGAGATCTGCACCCTCGTCCTCGAGTCCTACA TCGTCGACGTCCCCGACGGCAACACCGAGGACGACACCCGCCTCTTCGCCGACACCGTCA TCAGGCTCAACCTCCAGAAGCTCAAGTCCGTCTCCGAGGCCAACGCCAACGCCGCTGCCG CCGCCGCCGCTCCTCCTCCTCCTCCACCGGCGGCGGCGGAATAGCCTTTTTCTTTTCTTT TTGGACCTCTCTGCAATTTCACTTCTATTCAGGGAGGTGCTTCGAATTTGCTCCATGTCT CATGAAGTTGGAGGAGGAAGGGTCAGCTTCTAATACATCTCATTCCTGGGGGTGCTGCCT GTAATAATCTCTTCATCTTCTTTTTTCCTCTCCTCCTCCTCTTCTCTTCCTGGATTTCTT TTGCTTGGAATTTTTACTTACCTTTGTGTGTGTGTCTCACTTCCTGATTGGAATCCATAT TTGCTTTTCGGTGGTTTTGTTCTTCATTCAAATTCAAATTAATCTATCTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)