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Oryza sativa
cluster # 4346 cluster # 4346       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4346#0 length = 1645 sequences # 3  

consensusID : consensus_4346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1645
fasta sequence
                              [TCTTTTGTGCTTTCTGTAAAAGGTGGTCCAAAAGTTGGAGTTGTCATTGAGTACACCAGTCTTAATGTGGAAACTGTAGAAGTTCAAAATTCTACTGGCAAGCTGTCTGCAAAGACTGTTGGAAACTCTACTATGCGTGCAGTTGCTTTTTCAAATGAAGGCACCTTCATCTGTGAAGCTTTTGGAAGAGTTGAAGTGGATATCCCTGTGGCTATGATATTGAGTACTCAAAGTGACCGTCTTTGTGTTGGTTGCAGCATGCCCATCTACCCTTCTCTGCCCAAGGGAGATCTATTTTCCTTTTATGAAACTTGCCAAAGTTACACTTGGGTTATAGAAGATGACAAGGTGGCTATGTTTCAATTAGCTAGATCTTGGCAGTATGGACTTGATCAAGGGCTATATTCGGAAGGAAAGAACTATCCATGGTTTTCGAATGGAAGTAGCAATGCTTTTATTAATCATGTGATTGGAAGATCTGCTGGGAAAACCAAAATTTCTGTGTCAATTACTTGTGATTTCTTGATGACTGGCAGTTCTGGGTCCATAGCTTACAGTGCATCCAAGACAATTCTTGTTGTGCCAGATCCTCCTCTCGCACTTGGACTTCCTATAACATGGTTATTCCCACCCTTTTATACTACTACGGACCTTTTACCTAGATCAGTTGACCCAGACTCAGATGACCTGGAGAGTACTATTGGATATTCTCTGCTAAGGAACATTGGTAAAAGTGATCTTGTTTTGCAAAATGCTAACATTATTGATGGAAGTAAAATTAGGACTGGAGAAAGCAATGCGATTGATTGCATTCAGGCAAAGGATCACTCAACTGGTAGAACAGAAATTGCATCGTGCCTACGAGTTGCTGAGGTTGCACAAGCACAGATAGCAGCTGCAGAATCATCAATCCATATAGCCTATCTTTCTGTACATGATAAAGTTGAGTTGGATATAAAATACAGTGATGAATTAGGTTATACCTTCAGTGAAGCACTTGGAATAGTCCCTGTAAAGATTGAGACGAATCATCCTGATGTCGTGTCAATTCTTATGCCAAAAGAAGGCAATGGTACACATGGTACCCATGAACGTTTTGTGTTACAGGCAAGAAGTCATGGAACTGCTCTTGTAAGGTTGCAAATCAGCCATATTCCCAAGAAAGCCGATTTCATAATGGTATCTGTTGGTGCACAGATGTATCCCAGGGATGTGGTCCTTCGTTCTGGGCAGCAACTGAACTTCACCATTATTGGAGACCGGATGGATGTGCGTGGATCCAGTCAGTGGTTAAGTAGCAATGAAAAAGTTGTGCATATTAATAGAATAACAGGTGAAGCACAAGCACGTGGTGAAGGTATAGCAGAAGTAATATTCAAAGGTCCAAATACAAAACTGCACACAACTGTCACCGTGCTGAAGGTGAACCAGATAGTAGTTAATGCTCCTGCGGAGACGCTGACAAATGCTGCTGGACCACCTGGTGGATACAAGTTCTCTGTAAAATTAAGTGATTCAACTGGACACAGCGCAGACTCCTCTATCAATCACATTAACGTCCCATTTGACTGCAAGGTTGAACCTTCTTTTGTTGGGTTTGTTGAGCCGTGGAGTGATGATGCTGCTAAAAAATCTTACTGCTTAT]

[+] EMBL CB678510             [TCTTTTGTGCTTTCTGTAAAAGGTGGTCCAAAAGTTGGAGTTGTCATTGAGTACACCAGTCTTAATGTGGAAACTGTAGAAGTTCAAAATTCTACTGGCAAGCTGTCTGCAAAGACTGTTGGAAACTCTACTATGCGTGCAGTTGCTTTTTCAAATGAAGGCACCTTCATCTGTGAAGCTTTTGGAAGAGTTGAAGTGGATATCCCTGTGGCTATGATATTGAGTACTCAAAGTGACCGTCTTTGTGTTGGTTGCAGCATGCCCATCTACCCTTCTCTGCCCAAGGGAGATCTATTTTCCTTTTATGAAACTTGCCAAAGTTACACTTGGGTTATAGAAGATGACAAGGTGGCTATGTTTCAATTAGCTAGATCTTGGCAGTATGGACTTGATCAAGGGCTATATTCGGAAGGAAAGAACTATCCATGGTTTTCGAATGGAAGTAGCAATGCTTTTATTAATCATGTGATTGGAAGATCTGCTGGGAAAACCAAAATTTCTGTGTCAATTACTTGTGATTTCTTGATGACTGGCAGTTCTGGGTCCATAGCTTACAGTGCATCCAAGACAATTCTTGTTGTGCCAGATCCTCCTCTCGCACTTGGACTTCCTATAACATGGTTATTCCCCCCCTTTTATACTACTACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF322885             [                                                                 TGTGGAAACTGTAGAAGTTCAAAATTCTACTGGCAAGCTGTCTGCAAAGACTGTTGGAAACTCTACTATGCGTGCAGTTGCTTTTTCAAATGAAGGCACCTTCATCTGTGAAGCTTTTGGAAGAGTTGAAGTGGATATCCCTGTGGCTATGATATTGAGTACTCAAAGTGACCGTCTTTGTGTTGGTTGCAGCATGCCCATCTACCCTTCTCTGCCCAAGGGAGATCTATTTTCCTTTTATGAAACTTGCCAAAGTTACACTTGGGTTATAGAAGATGACAAGGTGGCTATGTTTCAATTAGCTAGATCTTGGCAGTATGGACTTGATCAAGGGCTATATTCGGAAGGAAAGAACTATCCATGGTTTTCGAATGGAAGTAGCAATGCTTTTATTAATCATGTGATTGGAAGATCTGCTGGGAAAACCAAAATTTCTGTGTCAATTACTTGTGATTTCTTGATGACTGGCAGTTCTGGGTCCATAGCTTACAGTGCATCCAAGACAATTCTTGTTGTGCCAGATCCTCCTCTCGCACTTGGACTTCCTATAACATGGTTATTCCCACCCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK063286             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTTTTATTAATCATGTGATTGGAAGATCTGCTGGGAAAACCAAAATTTCTGTGTCAATTACTTGTGATTTCTTGATGACTGGCAGTTCTGGGTCCATAGCTTACAGTGCATCCAAGACAATTCTTGTTGTGCCAGATCCTCCTCTCGCACTTGGACTTCCTATAACATGGTTATTCCCACCCTTTTATACTACTACGGACCTTTTACCTAGATCAGTTGACCCAGACTCAGATGACCTGGAGAGTACTATTGGATATTCTCTGCTAAGGAACATTGGTAAAAGTGATCTTGTTTTGCAAAATGCTAACATTATTGATGGAAGTAAAATTAGGACTGGAGAAAGCAATGCGATTGATTGCATTCAGGCAAAGGATCACTCAACTGGTAGAACAGAAATTGCATCGTGCCTACGAGTTGCTGAGGTTGCACAAGCACAGATAGCAGCTGCAGAATCATCAATCCATATAGCCTATCTTTCTGTACATGATAAAGTTGAGTTGGATATAAAATACAGTGATGAATTAGGTTATACCTTCAGTGAAGCACTTGGAATAGTCCCTGTAAAGATTGAGACGAATCATCCTGATGTCGTGTCAATTCTTATGCCAAAAGAAGGCAATGGTACACATGGTACCCATGAACGTTTTGTGTTACAGGCAAGAAGTCATGGAACTGCTCTTGTAAGGTTGCAAATCAGCCATATTCCCAAGAAAGCCGATTTCATAATGGTATCTGTTGGTGCACAGATGTATCCCAGGGATGTGGTCCTTCGTTCTGGGCAGCAACTGAACTTCACCATTATTGGAGACCGGATGGATGTGCGTGGATCCAGTCAGTGGTTAAGTAGCAATGAAAAAGTTGTGCATATTAATAGAATAACAGGTGAAGCACAAGCACGTGGTGAAGGTATAGCAGAAGTAATATTCAAAGGTCCAAATACAAAACTGCACACAACTGTCACCGTGCTGAAGGTGAACCAGATAGTAGTTAATGCTCCTGCGGAGACGCTGACAAATGCTGCTGGACCACCTGGTGGATACAAGTTCTCTGTAAAATTAAGTGATTCAACTGGACACAGCGCAGACTCCTCTATCAATCACATTAACGTCCCATTTGACTGCAAGGTTGAACCTTCTTTTGTTGGGTTTGTTGAGCCGTGGAGTGATGATGCTGCTAAAAAATCTTACTGCTTAT]


>consensus_4346#0 TCTTTTGTGCTTTCTGTAAAAGGTGGTCCAAAAGTTGGAGTTGTCATTGAGTACACCAGT CTTAATGTGGAAACTGTAGAAGTTCAAAATTCTACTGGCAAGCTGTCTGCAAAGACTGTT GGAAACTCTACTATGCGTGCAGTTGCTTTTTCAAATGAAGGCACCTTCATCTGTGAAGCT TTTGGAAGAGTTGAAGTGGATATCCCTGTGGCTATGATATTGAGTACTCAAAGTGACCGT CTTTGTGTTGGTTGCAGCATGCCCATCTACCCTTCTCTGCCCAAGGGAGATCTATTTTCC TTTTATGAAACTTGCCAAAGTTACACTTGGGTTATAGAAGATGACAAGGTGGCTATGTTT CAATTAGCTAGATCTTGGCAGTATGGACTTGATCAAGGGCTATATTCGGAAGGAAAGAAC TATCCATGGTTTTCGAATGGAAGTAGCAATGCTTTTATTAATCATGTGATTGGAAGATCT GCTGGGAAAACCAAAATTTCTGTGTCAATTACTTGTGATTTCTTGATGACTGGCAGTTCT GGGTCCATAGCTTACAGTGCATCCAAGACAATTCTTGTTGTGCCAGATCCTCCTCTCGCA CTTGGACTTCCTATAACATGGTTATTCCCACCCTTTTATACTACTACGGACCTTTTACCT AGATCAGTTGACCCAGACTCAGATGACCTGGAGAGTACTATTGGATATTCTCTGCTAAGG AACATTGGTAAAAGTGATCTTGTTTTGCAAAATGCTAACATTATTGATGGAAGTAAAATT AGGACTGGAGAAAGCAATGCGATTGATTGCATTCAGGCAAAGGATCACTCAACTGGTAGA ACAGAAATTGCATCGTGCCTACGAGTTGCTGAGGTTGCACAAGCACAGATAGCAGCTGCA GAATCATCAATCCATATAGCCTATCTTTCTGTACATGATAAAGTTGAGTTGGATATAAAA TACAGTGATGAATTAGGTTATACCTTCAGTGAAGCACTTGGAATAGTCCCTGTAAAGATT GAGACGAATCATCCTGATGTCGTGTCAATTCTTATGCCAAAAGAAGGCAATGGTACACAT GGTACCCATGAACGTTTTGTGTTACAGGCAAGAAGTCATGGAACTGCTCTTGTAAGGTTG CAAATCAGCCATATTCCCAAGAAAGCCGATTTCATAATGGTATCTGTTGGTGCACAGATG TATCCCAGGGATGTGGTCCTTCGTTCTGGGCAGCAACTGAACTTCACCATTATTGGAGAC CGGATGGATGTGCGTGGATCCAGTCAGTGGTTAAGTAGCAATGAAAAAGTTGTGCATATT AATAGAATAACAGGTGAAGCACAAGCACGTGGTGAAGGTATAGCAGAAGTAATATTCAAA GGTCCAAATACAAAACTGCACACAACTGTCACCGTGCTGAAGGTGAACCAGATAGTAGTT AATGCTCCTGCGGAGACGCTGACAAATGCTGCTGGACCACCTGGTGGATACAAGTTCTCT GTAAAATTAAGTGATTCAACTGGACACAGCGCAGACTCCTCTATCAATCACATTAACGTC CCATTTGACTGCAAGGTTGAACCTTCTTTTGTTGGGTTTGTTGAGCCGTGGAGTGATGAT GCTGCTAAAAAATCTTACTGCTTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)