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Oryza sativa
cluster # 4353 cluster # 4353       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4353#0 length = 1784 sequences # 3  

consensusID : consensus_4353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1784
fasta sequence
                              [CAGTGCTTTGTTATCATTTTGTACCATGTCTTTTGGGCCTACGGCGTACATTACTACATGTGGAGCGATTAGCAGCAGCCATTTCGTAGTCAGAATAGAAGAACACACTCTTGAGGCTATCAGCAACCAGCTCCACTGCTAGCTCCAGGCCGGTCATGGC-GGCGGCTGGTCACGATGTGCAGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGCCACACCGTCCCGATGACCCACCTCGCCTGCCTTCTCCGCCGCCGCGGCCTCGCCACCGTCACCTTCTTCAGCACCCCGGGCAACGCGCCGTTCGTCCGGGGACAGCTCGACGACGACGTGGCCGTCGTGGAGCTTCCCTTCCCGGACCATGTCGTCGCCCGCGGCGCCGCGGAGTGCGTCGAGGCCCTCGACTCCCTGTTCCCCCTTCCGGCGTTCGTCGAGGCGGTGTCGGCGCTCCGGCCGGGGCTGGAGGTGTCGCTCGCCGCCGCTCGGCCCCGCGTCGGCCTCCTCGTCGCCGACGCGTTCCTGCACTGGGCGCACGCCTCCGCCGCCGCGCTCGGCGTCCCGACGGTGGCGTTCCTCGGCGGGAACATGTTCGCGACGATCATGCGCGACGTGATCCTCCGCGACAACCCGGCCGCCGCGCTGCTGTCTGGCGGCGGCGGCGCCGAGGCGGCGACGTTCGCCGTGCCGGAGTTCCCGCACGTCCACCTCACGCTCGCCGACATCCCGGTCCCCTTCAACCGCCCGTCCCCGGAGGGTCCGATCATGGAGCTGAACGCCAAGCTATGGAAGGCCATCGCCGGCAGCAACGGCCTCATCGTCAACACCTTCGACGCCATGGAAGGCCGCTACGTCGAGCACTGGAACCGTGACCACCGCGCCGGCCCCAGGGCGTGGCCCATAGGCCCGCTCTGCCTCGCCCATGGCGGCACCGGCACCGGCACCGGCGCCGTCGAGCCCTCATGGATGAAGTGGCTGGACGAGAAGGCGGCCGCCGGGAGAGCCGTGCTGTACGTGGCGCTCGGCACCGCCATGGCCATCCCGGACGCGCAGCTCAGGGAGGTCGCCGGCGGGCTGGAAGCCGCCGCGGCCGCGGGCGTCTACTTCCTGTGGGCCGTGCGCCCCAGCGACGCCGACCTCGGCGCCGGCTTCGAGGAGCGCGTGGAGGGGCGAGGCATGGTGGTGCGGGAGTGGGTGGACCAATGGCGGATCCTGCAGCACGGCTGCGTGAGGGGCTTCCTCAGCCACTGCGGGTGGAACTCGGCGGTGGAGGGCGTCGCCGCCGGCGTGCCGCTGGCGGCGTGGCCGATGGGCGCCGAGCAGCCGCTCAACGCGATGCTCGTCGTCGACGAGCTGCGCGTCGGGGTCAGGGTGCCGGTGCCGACGGCGATGGCGACGGGCGGGCACGGGGTGGTCGGGAGCGAGGTGATCGCGCGCGTGGCGAGGGAGCTGATGATGATGGCCGGGGAGGGGAAGGGCGGCGGCGGCGGCGAGGAGGCGAGGAACGTCGCCGCGCTGGCGTCCAAGGCGCGAGAAGCGGTCGCCGAGGGCGGGTCGTCGTGGAAGGCGCTGGAGGAGATGGTTGCCACGCTCTGCCGCCCTGTTGAAGGAGATACACCGAAACCCACAAAATAAGTTTATTTGTTTCTACGTTTGACCGTCATCTTATAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATACTAAAAGTCCAT]

[+] EMBL AK105689             [CAGTGCTTTGTTATCATTTTGTACCATGTCTTTTGGGCCTACGGCGTACATTACTACATGTGGAGCGATTAGCAGCAGCCATTTCGTAGTCAGAATAGAAGAACACACTCTTGAGGCTATCAGCAACCAGCTCCACTGCTAGCTCCAGGCCGGTCATGGC GGCGGCTGGTCACGATGTGCAGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGCCACACCGTCCCGATGACCCACCTCGCCTGCCTTCTCCGCCGCCGCGGCCTCGCCACCGTCACCTTCTTCAGCACCCCGGGCAACGCGCCGTTCGTCCGGGGACAGCTCGACGACGACGTGGCCGTCGTGGAGCTTCCCTTCCCGGACCATGTCGTCGCCCGCGGCGCCGCGGAGTGCGTCGAGGCCCTCGACTCCCTGTTCCCCCTTCCGGCGTTCGTCGAGGCGGTGTCGGCGCTCCGGCCGGGGCTGGAGGTGTCGCTCGCCGCCGCTCGGCCCCGCGTCGGCCTCCTCGTCGCCGACGCGTTCCTGCACTGGGCGCACGCCTCCGCCGCCGCGCTCGGCGTCCCGACGGTGGCGTTCCTCGGCGGGAACATGTTCGCGACGATCATGCGCGACGTGATCCTCCGCGACAACCCGGCCGCCGCGCTGCTGTCTGGCGGCGGCGGCGCCGAGGCGGCGACGTTCGCCGTGCCGGAGTTCCCGCACGTCCACCTCACGCTCGCCGACATCCCGGTCCCCTTCAACCGCCCGTCCCCGGAGGGTCCGATCATGGAGCTGAACGCCAAGCTATGGAAGGCCATCGCCGGCAGCAACGGCCTCATCGTCAACACCTTCGACGCCATGGAAGGCCGCTACGTCGAGCACTGGAACCGTGACCACCGCGCCGGCCCCAGGGCGTGGCCCATAGGCCCGCTCTGCCTCGCCCATGGCGGCACCGGCACCGGCACCGGCGCCGTCGAGCCCTCATGGATGAAGTGGCTGGACGAGAAGGCGGCCGCCGGGAGAGCCGTGCTGTACGTGGCGCTCGGCACCGCCATGGCCATCCCGGACGCGCAGCTCAGGGAGGTCGCCGGCGGGCTGGAAGCCGCCGCGGCCGCGGGCGTCTACTTCCTGTGGGCCGTGCGCCCCAGCGACGCCGACCTCGGCGCCGGCTTCGAGGAGCGCGTGGAGGGGCGAGGCATGGTGGTGCGGGAGTGGGTGGACCAATGGCGGATCCTGCAGCACGGCTGCGTGAGGGGCTTCCTCAGCCACTGCGGGTGGAACTCGGCGGTGGAGGGCGTCGCCGCCGGCGTGCCGCTGGCGGCGTGGCCGATGGGCGCCGAGCAGCCGCTCAACGCGATGCTCGTCGTCGACGAGCTGCGCGTCGGGGTCAGGGTGCCGGTGCCGACGGCGATGGCGACGGGCGGGCACGGGGTGGTCGGGAGCGAGGTGATCGCGCGCGTGGCGAGGGAGCTGATGATGATGGCCGGGGAGGGGAAGGGCGGCGGCGGCGGCGAGGAGGCGAGGAACGTCGCCGCGCTGGCGTCCAAGGCGCGAGAAGCGGTCGCCGAGGGCGGGTCGTCGTGGAAGGCGCTGGAGGAGATGGTTGCCACGCTCTGCCGCCCTGTTGAAGGAGATACACCGAAACCCACAAAATAAGTTTATTTGTTTCTACGTTTGACCGTCATCTTATAATCTATCTAT                                                                                                   ]
[+] EMBL AK068128             [                                                                                               TAGAAGAACACACTCTTGAGGCTATCAGCAACCAGCTCCACTGCTAGCTCCAGGCCGGTCATGGC GGCGGCTGGTCACGATGTGCAGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGCCACACCGTCCCGATGACCCACCTCGCCTGCCTTCTCCGCCGCCGCGGCCTCGCCACCGTCACCTTCTTCAGCACCCCGGGCAACGCGCCGTTCGTCCGGGGACAGCTCGACGACGACGTGGCCGTCGTGGAGCTTCCCTTCCCGGACCATGTCGTCGCCCGCGGCGCCGCGGAGTGCGTCGAGGCCCTCGACTCCCTGTTCCCCCTTCCGGCGTTCGTCGAGGCGGTGTCGGCGCTCCGGCCGGGGCTGGAGGTGTCGCTCGCCGCCGCTCGGCCCCGCGTCGGCCTCCTCGTCGCCGACGCGTTCCTGCACTGGGCGCACGCCTCCGCCGCCGCGCTCGGCGTCCCGACGGTGGCGTTCCTCGGCGGGAACATGTTCGCGACGATCATGCGCGACGTGATCCTCCGCGACAACCCGGCCGCCGCGCTGCTGTCTGGCGGCGGCGGCGCCGAGGCGGCGACGTTCGCCGTGCCGGAGTTCCCGCACGTCCACCTCACGCTCGCCGACATCCCGGTCCCCTTCAACCGCCCGTCCCCGGAGGGTCCGATCATGGAGCTGAACGCCAAGCTATGGAAGGCCATCGCCGGCAGCAACGGCCTCATCGTCAACACCTTCGACGCCATGGAAGGCCGCTACGTCGAGCACTGGAACCGTGACCACCGCGCCGGCCCCAGGGCGTGGCCCATAGGCCCGCTCTGCCTCGCCCATGGCGGCACCGGCACCGGCACCGGCGCCGTCGAGCCCTCATGGATGAAGTGGCTGGACGAGAAGGCGGCCGCCGGGAGAGCCGTGCTGTACGTGGCGCTCGGCACCGCCATGGCCATCCCGGACGCGCAGCTCAGGGAGGTCGCCGGCGGGCTGGAAGCCGCCGCGGCCGCGGGCGTCTACTTCCTGTGGGCCGTGCGCCCCAGCGACGCCGACCTCGGCGCCGGCTTCGAGGAGCGCGTGGAGGGGCGAGGCATGGTGGTGCGGGAGTGGGTGGACCAATGGCGGATCCTGCAGCACGGCTGCGTGAGGGGCTTCCTCAGCCACTGCGGGTGGAACTCGGCGGTGGAGGGCGTCGCCGCCGGCGTGCCGCTGGCGGCGTGGCCGATGGGCGCCGAGCAGCCGCTCAACGCGATGCTCGTCGTCGACGAGCTGCGCGTCGGGGTCAGGGTGCCGGTGCCGACGGCGATGGCGACGGGCGGGCACGGGGTGGTCGGGAGCGAGGTGATCGCGCGCGTGGCGAGGGAGCTGATGATGATGGCCGGGGAGGGGAAGGGCGGCGGCGGCGGCGAGGAGGCGAGGAACGTCGCCGCGCTGGCGTCCAAGGCGCGAGAAGCGGTCGCCGAGGGCGGGTCGTCGTGGAAGGCGCTGGAGGAGATGGTTGCCACGCTCTGCCGCCCTGTTGAAGGAGATACACCGAAACCCACAAAATAAGTTTATTTGTTTCTACGTTTGACCGTCATCTTATAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATACTAAAAGTCCAT]
[+] EMBL AU222959             [                                                                                                          ACTCTTGAGGCTATCAGCAACCAGCTCCACTGCTAGCTCCAGGCCGGTCATGGCAGGCGGCTGGTCACGATGTGCAGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGCCACACCGTCCCGATGACCCACCTCGCCTGCCTTCTCCGCCGCCGCGGCCTCGCCACCGTCACCTTCTTCAGCACCCCGGGCAACGCGCCGTTCGTCCGGGGACAGCTCGACGACGACGTGGCCGTCGTGGAGCTTCCCTTCCCGGACCATGTCGTCGCCCGCGGCGCCGCGGAGTGCGTCGAGGCCCTCGACTCCCTGTTCCCCCTTCCGGCGTTCGTCGAGGCGGTGTCGGCGCTCCGGCCGGGGCTGGAGGTGTCGCTCGCCGCCGCTCGG CCCGCGTCGGCCTCCTCGTCGCCGACGCGTTCCTGCACTGGGCGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_4353#0 CAGTGCTTTGTTATCATTTTGTACCATGTCTTTTGGGCCTACGGCGTACATTACTACATG TGGAGCGATTAGCAGCAGCCATTTCGTAGTCAGAATAGAAGAACACACTCTTGAGGCTAT CAGCAACCAGCTCCACTGCTAGCTCCAGGCCGGTCATGGCGGCGGCTGGTCACGATGTGC AGCTCCCCCACGTCGCCATCTTCCCGTTCATGGCCAGGGGCCACACCGTCCCGATGACCC ACCTCGCCTGCCTTCTCCGCCGCCGCGGCCTCGCCACCGTCACCTTCTTCAGCACCCCGG GCAACGCGCCGTTCGTCCGGGGACAGCTCGACGACGACGTGGCCGTCGTGGAGCTTCCCT TCCCGGACCATGTCGTCGCCCGCGGCGCCGCGGAGTGCGTCGAGGCCCTCGACTCCCTGT TCCCCCTTCCGGCGTTCGTCGAGGCGGTGTCGGCGCTCCGGCCGGGGCTGGAGGTGTCGC TCGCCGCCGCTCGGCCCCGCGTCGGCCTCCTCGTCGCCGACGCGTTCCTGCACTGGGCGC ACGCCTCCGCCGCCGCGCTCGGCGTCCCGACGGTGGCGTTCCTCGGCGGGAACATGTTCG CGACGATCATGCGCGACGTGATCCTCCGCGACAACCCGGCCGCCGCGCTGCTGTCTGGCG GCGGCGGCGCCGAGGCGGCGACGTTCGCCGTGCCGGAGTTCCCGCACGTCCACCTCACGC TCGCCGACATCCCGGTCCCCTTCAACCGCCCGTCCCCGGAGGGTCCGATCATGGAGCTGA ACGCCAAGCTATGGAAGGCCATCGCCGGCAGCAACGGCCTCATCGTCAACACCTTCGACG CCATGGAAGGCCGCTACGTCGAGCACTGGAACCGTGACCACCGCGCCGGCCCCAGGGCGT GGCCCATAGGCCCGCTCTGCCTCGCCCATGGCGGCACCGGCACCGGCACCGGCGCCGTCG AGCCCTCATGGATGAAGTGGCTGGACGAGAAGGCGGCCGCCGGGAGAGCCGTGCTGTACG TGGCGCTCGGCACCGCCATGGCCATCCCGGACGCGCAGCTCAGGGAGGTCGCCGGCGGGC TGGAAGCCGCCGCGGCCGCGGGCGTCTACTTCCTGTGGGCCGTGCGCCCCAGCGACGCCG ACCTCGGCGCCGGCTTCGAGGAGCGCGTGGAGGGGCGAGGCATGGTGGTGCGGGAGTGGG TGGACCAATGGCGGATCCTGCAGCACGGCTGCGTGAGGGGCTTCCTCAGCCACTGCGGGT GGAACTCGGCGGTGGAGGGCGTCGCCGCCGGCGTGCCGCTGGCGGCGTGGCCGATGGGCG CCGAGCAGCCGCTCAACGCGATGCTCGTCGTCGACGAGCTGCGCGTCGGGGTCAGGGTGC CGGTGCCGACGGCGATGGCGACGGGCGGGCACGGGGTGGTCGGGAGCGAGGTGATCGCGC GCGTGGCGAGGGAGCTGATGATGATGGCCGGGGAGGGGAAGGGCGGCGGCGGCGGCGAGG AGGCGAGGAACGTCGCCGCGCTGGCGTCCAAGGCGCGAGAAGCGGTCGCCGAGGGCGGGT CGTCGTGGAAGGCGCTGGAGGAGATGGTTGCCACGCTCTGCCGCCCTGTTGAAGGAGATA CACCGAAACCCACAAAATAAGTTTATTTGTTTCTACGTTTGACCGTCATCTTATAATCTA TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTATTATTATTATTATTATT ATTATTATTATTATTATTATTATTATTATATACTAAAAGTCCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)