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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4366 cluster # 4366       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4366#0 length = 1048 sequences # 3  

consensusID : consensus_4366#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1048
fasta sequence
                              [AGGATAGCTCAATTGATTTCGTACAGATGCTGCAGATGTCGGAGGAGGCCGTTGCCGAAATGTCCTCATTCAGATTTTTACTATTCCAAAGTGCCTGAACCACAACCCGTCAGTCAAGAAAATGCAGATGACATGCTCTCGAGCGAGGAAGCTGCTGGAGCAGATGGAGATCCACCGCTCGATTCATCTGGAGGAGTTGAACCAACTGTAGAAGAAACTGTTGGTGCTAATTTCTCAGCGAACATGAAAAGCTCTGTCCCAGGAAGTGTTCAAGAGACTATCTATATGGATGGTTCTTCCCATCCTACTCATCCTGTCAGCAAGGGGGTTGCGAAGGAGGT-CCGGCCATATGATGCATGCGTTGCATGGTATGTACCTGGTACCTGCCGAAGATCGGCCCCTGGGGATGATAG-CCCCCCACAAGCTGCTACAGTGGGGAGCAACTTTGCCAACGACCACTCTGTCATACTTCACCAGGCTTATGATGGTTTCCGGGCAATAGCTGCGGAGACAGGCTCATTGTATGAGCATCTAAGGCAAAAAGACCATCAGACAAGTGATGATATCATGATTACCTTGGACAAACTTCAGCAGATTGCTTTGCATCATATGAAGGATATTGCCTG-CCATCAAGCC-AACAATGTAGTTCAACC-ATCTGATCAGAGTAATTCTAGGGCTCCAGTGCCAGACACAGATGCTGCTCCACCATAGTTAACGGTGCTACCAAGCAATTGATGGAGCGCGAGGATGTAATCAAGAATCCTGTACAAATGGTTGTGTTTAGCAGG-AAATGGTAACTTCAGTCTTCTGGCTG-TTCGCTGGATGCACCTGATGCGGCATTTGTGAATTGTGATCAGCGCTGCTGCACCTGACGAATAATTTTGTTTTCCTGTTGCATCTGACGAATGATTTTGATTTTCTTTTGCCGCATGACTCGAACTAAACTGATCCATGTCAATATGCTACTACTGATGTCTAATGAACTTGGGACAGATGTGTATAGTTAAAAAAACTGTATCTGATACTACTTCCATCCATTAAAAAAAAA]

[+] EMBL AU077874             [AGGATAGCTCAATTGATTTCGTACAGATGCTGCAGATGTCGGAGGAGGCCGTTGCCGAAATGTCCTCATTCAGATTTTTACTATTCCAAAGTGCCTGAACCACAACCCGTCAGTCAAGAAAATGCAGATGACATGCTCTCGAGCGAGGAAGCTGCTGGAGCAGATGGAGATCCACCGCTCGATTCATCTGGAGGAGTTGAACCAACTGTAGAAGAAACTGTTGGTGCTAATTTCTCAGCGAACATGAAAAGCTCTGTCCCAGGAAGTGTTCAAGAGACTATCTATATGGATGGTTCTTCCCATCCTACTCATCCTGTCAGCAAGGGGGTTGCGAAGGAGGT CCGGCCATATGATGCATGCGTTGCATGGTATGTACCTGGTACCTGCCGAAGATCGGCCCCTGGGGATGATAG CCCCCCACAAGCTGCTACAGTGGGGAGCAACTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU077875             [                                                                                                                                                                                                                                                                                                                                                  GGTCCCGNCCATNTGATGCATGCGTTGCATGGTATGTACCTGGTACCTGCCGAAGATCGGCCCCTGGGGATGATAGCCCCCCCACAAGCTGCTACAGTGGGGAGCAACTTTGCCAACGACCACTCTGTCATACTTCACCAGGCTTATGATGGTTTCCGGGCAATAGCTGCGGAGACAGGCTCATTGTATGAGCATCTAAGGCAAAAAGACCATCAGACAAGTGATGATATCATGATTACCTTGGACAAACTTCAGCAGATTGCTTTGCATCATATGAAGGATATTGCCTG CCATCAAGCC AACAATGTAGTTCAACC ATCTGATCAGAGTAATTCTAGGGCTCCAGTGCCAGACACAGATGCTGCTCCACCATAGTTAACGGTGCTACCAAGCAATTGATGGAGCGCGAGGATGTAATCAAGAATCCTGTACAAATGGTTGTGTTTAGCAGG AAATGGTAACTTCAGTCTTCTGGCTG TTCGCTGGATGCACCTGATGCGGCATTTGTGAATTGTGATCAGCGCTGCTGCACCTGACGAATAATTTTGTTTTCCTGTTGCATCTGACGAATGATTTTGATTTTCTTTTGCCGCATGACTCGAACTAAACTGATCCATGTCAATATGCTACTACTGATGTCTAATGAACTTGGGACAGATGTGTATAGTTAAAAAAA                                    ]
[+] EMBL AU166632             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATGAAGGATATTGCCTGCCCATNAAGCCNAACAATGTAGTTCAACCNATCTGATCAGAGTAATTCTAGGGCTCCAGTGCCAGACACAGATGCTGCTCCACCATAGTTAACGGTGCTACCAAGCAATTGATGGAGCGCGAGGATGTAATCAAGAATCCTGTACAAATGGTTGTGTTTAGCAGGAAAATGGTAACTTCAGTCTTCTGGCTGCTTCGCTGGATGCACCTGATGCGGCATTTGTGAATTGTGATCAGCGCTGCTGCACCTGACGAATAATTTTGTTTTCCTGTTGCATCTGACGAATGATTTTGATTTTCTTTTGCCGCATGACTCGAACTAAACTGATCCATGTCAATATGCTACTACTGATGTCTAATGAACTTGGGACAGATGTGTATAGTTAATGTTGCTGTATCTGATACTACTTCCATCCATTAAAAAAAAA]


>consensus_4366#0 AGGATAGCTCAATTGATTTCGTACAGATGCTGCAGATGTCGGAGGAGGCCGTTGCCGAAA TGTCCTCATTCAGATTTTTACTATTCCAAAGTGCCTGAACCACAACCCGTCAGTCAAGAA AATGCAGATGACATGCTCTCGAGCGAGGAAGCTGCTGGAGCAGATGGAGATCCACCGCTC GATTCATCTGGAGGAGTTGAACCAACTGTAGAAGAAACTGTTGGTGCTAATTTCTCAGCG AACATGAAAAGCTCTGTCCCAGGAAGTGTTCAAGAGACTATCTATATGGATGGTTCTTCC CATCCTACTCATCCTGTCAGCAAGGGGGTTGCGAAGGAGGTCCGGCCATATGATGCATGC GTTGCATGGTATGTACCTGGTACCTGCCGAAGATCGGCCCCTGGGGATGATAGCCCCCCA CAAGCTGCTACAGTGGGGAGCAACTTTGCCAACGACCACTCTGTCATACTTCACCAGGCT TATGATGGTTTCCGGGCAATAGCTGCGGAGACAGGCTCATTGTATGAGCATCTAAGGCAA AAAGACCATCAGACAAGTGATGATATCATGATTACCTTGGACAAACTTCAGCAGATTGCT TTGCATCATATGAAGGATATTGCCTGCCATCAAGCCAACAATGTAGTTCAACCATCTGAT CAGAGTAATTCTAGGGCTCCAGTGCCAGACACAGATGCTGCTCCACCATAGTTAACGGTG CTACCAAGCAATTGATGGAGCGCGAGGATGTAATCAAGAATCCTGTACAAATGGTTGTGT TTAGCAGGAAATGGTAACTTCAGTCTTCTGGCTGTTCGCTGGATGCACCTGATGCGGCAT TTGTGAATTGTGATCAGCGCTGCTGCACCTGACGAATAATTTTGTTTTCCTGTTGCATCT GACGAATGATTTTGATTTTCTTTTGCCGCATGACTCGAACTAAACTGATCCATGTCAATA TGCTACTACTGATGTCTAATGAACTTGGGACAGATGTGTATAGTTAAAAAAACTGTATCT GATACTACTTCCATCCATTAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)