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Oryza sativa
cluster # 4369 cluster # 4369       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4369#0 length = 2110 sequences # 1  
consensus_4369#1 length = 1649 sequences # 2  

consensusID : consensus_4369#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2110
fasta sequence
                              [CCCCTCCCGCTCGCACAATCGACGCCCACTTCCGCCGATCCGGCCGCCGTCTCCCGCACTGCCCCCACCTCAACCGCCGCTGCCGCCGATCCTGCGGTCTCGCCTCGCCTCGCCGCCCTCCGCCTCCGCCTCCCTCCCGCCCCTCGCCGTCTTCCGCCTATCCCCGCCGTCGCGGCCCCCTCACTTCCCCACCTCCACCGCCGCTGCGCCGATCCATCATCCTGCTGCCTCGATCCATCATAGCTGCGCGCGCTCCGCCGTCGCGCCTCCACCTTCCCCTCGAAAGCAACTCGCCTTCTCCACTGGTGGCCTCCGCCTAACCCCGTCGCCGCCACTAGTGGATCGCGACCGTGCCGACAGATCACACACATTTCAGAGTTAGTCTCCACACCAACGTTGTCGTCACTATCAGATTGTAGGCAACCAACCAACCAGTCCAGGGGCCCCAGGAGTCCAGGCTTGCTTTTTGAAAACCCTTACCTACTCCACAAGCAATTATGAGAATTGAGATGTTGGAAAAACTCTGTGAATAGTGTTTGAACTTTTCGAAAAGGCCATAAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAGGGGATTAAAAGCAGCGGCCTTTGGGTTGTTGCTTGGAGTACCAAACTTCGGAAGGGTTCGTCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCTTCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTTCCTGTATCAAATAATCCTACCGTCGCATGATTGTCCTTGGGGTTTGTATCAAATACAACTTTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTCCAAATTTATC]

[+] EMBL AK070755             [CCCCTCCCGCTCGCACAATCGACGCCCACTTCCGCCGATCCGGCCGCCGTCTCCCGCACTGCCCCCACCTCAACCGCCGCTGCCGCCGATCCTGCGGTCTCGCCTCGCCTCGCCGCCCTCCGCCTCCGCCTCCCTCCCGCCCCTCGCCGTCTTCCGCCTATCCCCGCCGTCGCGGCCCCCTCACTTCCCCACCTCCACCGCCGCTGCGCCGATCCATCATCCTGCTGCCTCGATCCATCATAGCTGCGCGCGCTCCGCCGTCGCGCCTCCACCTTCCCCTCGAAAGCAACTCGCCTTCTCCACTGGTGGCCTCCGCCTAACCCCGTCGCCGCCACTAGTGGATCGCGACCGTGCCGACAGATCACACACATTTCAGAGTTAGTCTCCACACCAACGTTGTCGTCACTATCAGATTGTAGGCAACCAACCAACCAGTCCAGGGGCCCCAGGAGTCCAGGCTTGCTTTTTGAAAACCCTTACCTACTCCACAAGCAATTATGAGAATTGAGATGTTGGAAAAACTCTGTGAATAGTGTTTGAACTTTTCGAAAAGGCCATAAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAGGGGATTAAAAGCAGCGGCCTTTGGGTTGTTGCTTGGAGTACCAAACTTCGGAAGGGTTCGTCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCTTCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTTCCTGTATCAAATAATCCTACCGTCGCATGATTGTCCTTGGGGTTTGTATCAAATACAACTTTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTCCAAATTTATC]


>consensus_4369#0 CCCCTCCCGCTCGCACAATCGACGCCCACTTCCGCCGATCCGGCCGCCGTCTCCCGCACT GCCCCCACCTCAACCGCCGCTGCCGCCGATCCTGCGGTCTCGCCTCGCCTCGCCGCCCTC CGCCTCCGCCTCCCTCCCGCCCCTCGCCGTCTTCCGCCTATCCCCGCCGTCGCGGCCCCC TCACTTCCCCACCTCCACCGCCGCTGCGCCGATCCATCATCCTGCTGCCTCGATCCATCA TAGCTGCGCGCGCTCCGCCGTCGCGCCTCCACCTTCCCCTCGAAAGCAACTCGCCTTCTC CACTGGTGGCCTCCGCCTAACCCCGTCGCCGCCACTAGTGGATCGCGACCGTGCCGACAG ATCACACACATTTCAGAGTTAGTCTCCACACCAACGTTGTCGTCACTATCAGATTGTAGG CAACCAACCAACCAGTCCAGGGGCCCCAGGAGTCCAGGCTTGCTTTTTGAAAACCCTTAC CTACTCCACAAGCAATTATGAGAATTGAGATGTTGGAAAAACTCTGTGAATAGTGTTTGA ACTTTTCGAAAAGGCCATAAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAG GGGATTAAAAGCAGCGGCCTTTGGGTTGTTGCTTGGAGTACCAAACTTCGGAAGGGTTCG TCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCG AGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCT GCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACC TCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGA CAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCA TTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTC TCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGG TGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGA TGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCG AGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTT TCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTT TCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAG TGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTG TCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACT CCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCA CCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCA TGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGG TCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGC TATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCT TTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTA ATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCT TCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTT CCTGTATCAAATAATCCTACCGTCGCATGATTGTCCTTGGGGTTTGTATCAAATACAACT TTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTC CAAATTTATC



consensusID : consensus_4369#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1649
fasta sequence
                              [AAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAGGGGATTAAAAGCAGCGGCCTTTGGGTTGTTGCCTGGAGTACCAAACTTCGGTAATATCGAATTCCAATTTAATAAGCTTATAGCATACATTAGCATTGATCAATTCGATTCGACATGAGAGCAGGAAGGGTTCGTCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCTTCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTTCCTGTATCAAATAATCCTACCGTCGCATGATTGCCCTTGGGGTTTGTATCAAATACAACTTTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTCCAAATTTATCTATTTTATTCACTTATGAAGCAA]

[+] EMBL AK060494             [AAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAGGGGATTAAAAGCAGCGGCCTTTGGGTTGTTGCCTGGAGTACCAAACTTCGGTAATATCGAATTCCAATTTAATAAGCTTATAGCATACATTAGCATTGATCAATTCGATTCGACATGAGAGCAGGAAGGGTTCGTCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCTTCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTTCCTGTATCAAATAATCCTACCGTCGCATGATTGCCCTTGGGGTTTGTATCAAATACAACTTTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTCCAAATTTATCTATTTTATTCACTTATGAAGCAA]
[+] EMBL AK072179             [                                                                                                                                                                     GGAAGGGTTCGTCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCTTCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTTCCTGTATCAAATAATCCTACCGTCGCATGATTGCCCTTGGGGTTTGTATCAAATACAACTTTT                                                                                          ]


>consensus_4369#1 AAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAGGGGATTAAAAGCAGCGGC CTTTGGGTTGTTGCCTGGAGTACCAAACTTCGGTAATATCGAATTCCAATTTAATAAGCT TATAGCATACATTAGCATTGATCAATTCGATTCGACATGAGAGCAGGAAGGGTTCGTCAG ATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCA CGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTC CCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAA GGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGA TGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGC CAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTC TGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAG CTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTC GGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGG CATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCA GGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGG AAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAA AATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTC TGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCAT TAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTC AAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGG TGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTC CAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATC CAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAA AGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGG AGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCTTCAC ACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTTCCTG TATCAAATAATCCTACCGTCGCATGATTGCCCTTGGGGTTTGTATCAAATACAACTTTTT TGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTCCAAA TTTATCTATTTTATTCACTTATGAAGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4369#0      CCCCTCCCGCTCGCACAATCGACGCCCACTTCCGCCGATCCGGCCGCCGTCTCCCGCACT 60
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      GCCCCCACCTCAACCGCCGCTGCCGCCGATCCTGCGGTCTCGCCTCGCCTCGCCGCCCTC 120
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      CGCCTCCGCCTCCCTCCCGCCCCTCGCCGTCTTCCGCCTATCCCCGCCGTCGCGGCCCCC 180
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      TCACTTCCCCACCTCCACCGCCGCTGCGCCGATCCATCATCCTGCTGCCTCGATCCATCA 240
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      TAGCTGCGCGCGCTCCGCCGTCGCGCCTCCACCTTCCCCTCGAAAGCAACTCGCCTTCTC 300
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      CACTGGTGGCCTCCGCCTAACCCCGTCGCCGCCACTAGTGGATCGCGACCGTGCCGACAG 360
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      ATCACACACATTTCAGAGTTAGTCTCCACACCAACGTTGTCGTCACTATCAGATTGTAGG 420
consensus_4369#1      ------------------------------------------------------------
                                                                                  

consensus_4369#0      CAACCAACCAACCAGTCCAGGGGCCCCAGGAGTCCAGGCTTGCTTTTTGAAAACCCTTAC 480
consensus_4369#1      -------------------------------------------------AAAACCCGAG- 10
                                                                       *******    

consensus_4369#0      CTACTCCACAAGCAATTATGAGAATTGAGATGTTGGAAAAACTCTGTGAATAGTGTTTGA 540
consensus_4369#1      --GGTTCAAAGTGAGTCAGAAGAACTG---TATCCAGGGGATTAAAAGCAGCGGCCTTTG 65
                          * ** *   * * *  **** **   * *       * *    * *  *   **  

consensus_4369#0      ACTTTTCGAAAAGGCCATAAAACCCGAGGGTTCAAAGTGAGTCAGAAGAACTGTATCCAG 600
consensus_4369#1      GGTTGTTGCCTGGAGTACCAAACTTCGG---TAATATCGAATTCCAA----TTTAATAAG 118
                        ** * *    *   *  ****    *   * * *  ** *   **    * **   **

consensus_4369#0      GGGATTAAAAGCAGCGGCCTTTGGGTTGTTGCTTGGAGTACCAAACTTCGGAAGGGTTCG 660
consensus_4369#1      CTTATAGCATACATTAGCATTGATCAATTCGATTCGA-CATGAGAGCA-GGAAGGGTTCG 176
                         **   *  **   ** **       * * ** **  *  * *    ***********

consensus_4369#0      TCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCG 720
consensus_4369#1      TCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCG 236
                      ************************************************************

consensus_4369#0      AGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCT 780
consensus_4369#1      AGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCT 296
                      ************************************************************

consensus_4369#0      GCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACC 840
consensus_4369#1      GCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACC 356
                      ************************************************************

consensus_4369#0      TCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGA 900
consensus_4369#1      TCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGA 416
                      ************************************************************

consensus_4369#0      CAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCA 960
consensus_4369#1      CAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCA 476
                      ************************************************************

consensus_4369#0      TTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTC 1020
consensus_4369#1      TTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTC 536
                      ************************************************************

consensus_4369#0      TCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGG 1080
consensus_4369#1      TCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGG 596
                      ************************************************************

consensus_4369#0      TGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGA 1140
consensus_4369#1      TGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGA 656
                      ************************************************************

consensus_4369#0      TGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCG 1200
consensus_4369#1      TGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCG 716
                      ************************************************************

consensus_4369#0      AGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTT 1260
consensus_4369#1      AGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTT 776
                      ************************************************************

consensus_4369#0      TCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTT 1320
consensus_4369#1      TCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTT 836
                      ************************************************************

consensus_4369#0      TCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAG 1380
consensus_4369#1      TCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAG 896
                      ************************************************************

consensus_4369#0      TGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTG 1440
consensus_4369#1      TGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTG 956
                      ************************************************************

consensus_4369#0      TCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACT 1500
consensus_4369#1      TCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACT 1016
                      ************************************************************

consensus_4369#0      CCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCA 1560
consensus_4369#1      CCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCA 1076
                      ************************************************************

consensus_4369#0      CCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCA 1620
consensus_4369#1      CCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCA 1136
                      ************************************************************

consensus_4369#0      TGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGG 1680
consensus_4369#1      TGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGG 1196
                      ************************************************************

consensus_4369#0      TCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGC 1740
consensus_4369#1      TCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGC 1256
                      ************************************************************

consensus_4369#0      TATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCT 1800
consensus_4369#1      TATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCT 1316
                      ************************************************************

consensus_4369#0      TTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTA 1860
consensus_4369#1      TTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTA 1376
                      ************************************************************

consensus_4369#0      ATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCT 1920
consensus_4369#1      ATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTCAACGGTTTGAGATTTGTTCT 1436
                      ************************************************************

consensus_4369#0      TCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTT 1980
consensus_4369#1      TCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCTTATTTTAGCCCCGGGCAGTT 1496
                      ************************************************************

consensus_4369#0      CCTGTATCAAATAATCCTACCGTCGCATGATTGTCCTTGGGGTTTGTATCAAATACAACT 2040
consensus_4369#1      CCTGTATCAAATAATCCTACCGTCGCATGATTGCCCTTGGGGTTTGTATCAAATACAACT 1556
                      ********************************* **************************

consensus_4369#0      TTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTC 2100
consensus_4369#1      TTTTTGCTGATGCAACTGTTGTACGAGGGAAAGTGCTATGGTAGATGTGACTACTACCTC 1616
                      ************************************************************

consensus_4369#0      CAAATTTATC----------------------- 2110
consensus_4369#1      CAAATTTATCTATTTTATTCACTTATGAAGCAA 1649
                      **********                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)