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Oryza sativa
cluster # 4370 cluster # 4370       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4370#0 length = 2124 sequences # 3  

consensusID : consensus_4370#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2124
fasta sequence
                              [GTCACGCATCGGCGCCGCCCTCCGGCCAGCAGCGACTCGCCGACACATCTTCAAAGAGTCCCGCCGTCGTATGCGTGGCTCCCCTCCCCGGCCTCTCGTCTCGTGGGAGGTCTGGATCGACCGCTTCCTCCGCTCGTCGCGGCGAATCCAACCAACGCCGGCGTCCCTCCGCGCCGCAGCTTCCTGTGCTGAATCTCGCCGCTCCCCGAGTCCGGGAACGCACGGAGCGGGCGCGGCGAGCGGCTGGCACCTTGGTTCAAATCTCGCCGCGAAACTTCTAGTAGCAGGCAGCGGTTTAAATCTCGAATTTATCCATTTTGGTGTTCGGCTGAGCCCCCATGGCCGACGCTAGGTCCGCCCCTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGATGTATTCCATGGTCGACACCATCCCACGATACATAAGGCTAAAACCAGGCATGGAGCCCCATATTCCAGAGATTCAGAGCGAGCTGACGTGCCATCTCAACAAGGTTTCATGGCTGCCAGATTTCTACGCAATTCCGCCTCAAGTTCAGATTGCTAGCTCCATGGCCTATCAGCAAGGAAAGATCTATGGAATTGATGCAGCTTCTGGAGCTGCTGTCTTAGCACTTGATGTTCAACCAGGAGAACATGTTCTGGACCTCTGTGCTGCCCCAGGTGCAAAGCTTTGCATGCTTGCAGATATGCTTGGAGGCAGAGGTTCTCTGACTGGCGTTGATGTTGCAAAGCACCGTCTTGCGGCCTGTCGTACGATGTTGCAGAAGTATTCTCTCGGAGATCGTTGTCGTCTCTTTGTTGCCGATGGGACTTCATTTTCTATATTACCTGTGAACTCTAGCTTGGGTAATGGAGAAGGATCAACTTGTCATAAGGACAATGGAAGTACATTGTCGGAATGGACTTCAAAGAGATCGTGGAAAGACCGACAAAAGTCTAAAAAGGCAAGAATGGCGGGTTCACCTCATCTAACATCAACTTCAGAACCTGAACTGATATACTATGGCAAACATTCAGGATTAGTTGGATTACGCAAATGTGATGCTATTCGTCCATCAGCTGATGATGAAGCCCAGACATCTGGCTATGACAAAGTCCTAGTTGATGCAGAATGTACTCATGATGGATCCATAAAGCACATCCAAAAATTTGAGTTCTGGGGATGGAAAACCTTAGATCGTCGTGTACTTGATGCAGAAAGAACTGATGACCTGCTTCATCTTCAGTTACGCCTTCTCACTAATGGTTTTAAATTATTGAAAACTGGTGGATCACTAGTATATAGTACTTGCAGGTGAGTAATCTCTTCACATGCAATTCCAATATTTGATGCCTCCTCAATCGCTTCCCAGCTGTGTAGTCACCTTTTCCTATTGCATTTCGTGTCTTACTTAACTACTGATGGCTTGCGTTGAAATAGCTTGACAGTTGCACAAAATGAGAATGTGGTTCAACAGTTTCTTTGCAAACACTCTTCAGCAGGTACAGAATAGCCGTGTTCCTCATTTCAGTATTATGTATATCCCTTATATTTTTACTTTGAAGATGAATATTGTTATTTTTCTCAAATGGACTGATTAAATTGATTGTGGTACTTCTAGTCAGGAAATCTTTAGTAGTGTACTTGTTCTCACTTCTTGGTGTGGTTAAGTGAACCTTACTTATAACAAGATTATTTAGTTTGTCTTGGTTCATTGAAGTTGTCAAAGTTCAACAGATCTGCCCTGATGACCTTCTGGGATTTCTTTTGCAAACATGCAGAGCTACAAAAGATTGATTCAGCTGACAGTTGGCCTTGCAGAAGTGGCAGCATCTTCAAAACATTGCGATTTGATCCTGCAACTTCACAAACGAGTGGCCTTTTTGTTGCCAAGTTCACTAAATTACAGATTTAGAGCATATCTGATCAGTCTCCATGTAGTTCTAAAGATGTGCATTTAACTAGTATATGATTCCATGTGCACGTTAGATGTTCACAAGTAACTGTATGCTTCAAATTCCCGGAGCCATCACTGTTATGGTTTGCGAAGCAAAGTGGTGCAAACTGTCAGCTATGCGAATCTAAACTTGCAATTTGGAAGGTAAAAGCTT]

[+] EMBL AK103173             [GTCACGCATCGGCGCCGCCCTCCGGCCAGCAGCGACTCGCCGACACATCTTCAAAGAGTCCCGCCGTCGTATGCGTGGCTCCCCTCCCCGGCCTCTCGTCTCGTGGGAGGTCTGGATCGACCGCTTCCTCCGCTCGTCGCGGCGAATCCAACCAACGCCGGCGTCCCTCCGCGCCGCAGCTTCCTGTGCTGAATCTCGCCGCTCCCCGAGTCCGGGAACGCACGGAGCGGGCGCGGCGAGCGGCTGGCACCTTGGTTCAAATCTCGCCGCGAAACTTCTAGTAGCAGGCAGCGGTTTAAATCTCGAATTTATCCATTTTGGTGTTCGGCTGAGCCCCCATGGCCGACGCTAGGTCCGCCCCTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGATGTATTCCATGGTCGACACCATCCCACGATACATAAGGCTAAAACCAGGCATGGAGCCCCATATTCCAGAGATTCAGAGCGAGCTGACGTGCCATCTCAACAAGGTTTCATGGCTGCCAGATTTCTACGCAATTCCGCCTCAAGTTCAGATTGCTAGCTCCATGGCCTATCAGCAAGGAAAGATCTATGGAATTGATGCAGCTTCTGGAGCTGCTGTCTTAGCACTTGATGTTCAACCAGGAGAACATGTTCTGGACCTCTGTGCTGCCCCAGGTGCAAAGCTTTGCATGCTTGCAGATATGCTTGGAGGCAGAGGTTCTCTGACTGGCGTTGATGTTGCAAAGCACCGTCTTGCGGCCTGTCGTACGATGTTGCAGAAGTATTCTCTCGGAGATCGTTGTCGTCTCTTTGTTGCCGATGGGACTTCATTTTCTATATTACCTGTGAACTCTAGCTTGGGTAATGGAGAAGGATCAACTTGTCATAAGGACAATGGAAGTACATTGTCGGAATGGACTTCAAAGAGATCGTGGAAAGACCGACAAAAGTCTAAAAAGGCAAGAATGGCGGGTTCACCTCATCTAACATCAACTTCAGAACCTGAACTGATATACTATGGCAAACATTCAGGATTAGTTGGATTACGCAAATGTGATGCTATTCGTCCATCAGCTGATGATGAAGCCCAGACATCTGGCTATGACAAAGTCCTAGTTGATGCAGAATGTACTCATGATGGATCCATAAAGCACATCCAAAAATTTGAGTTCTGGGGATGGAAAACCTTAGATCGTCGTGTACTTGATGCAGAAAGAACTGATGACCTGCTTCATCTTCAGTTACGCCTTCTCACTAATGGTTTTAAATTATTGAAAACTGGTGGATCACTAGTATATAGTACTTGCAGGTGAGTAATCTCTTCACATGCAATTCCAATATTTGATGCCTCCTCAATCGCTTCCCAGCTGTGTAGTCACCTTTTCCTATTGCATTTCGTGTCTTACTTAACTACTGATGGCTTGCGTTGAAATAGCTTGACAGTTGCACAAAATGAGAATGTGGTTCAACAGTTTCTTTGCAAACACTCTTCAGCAGGTACAGAATAGCCGTGTTCCTCATTTCAGTATTATGTATATCCCTTATATTTTTACTTTGAAGATGAATATTGTTATTTTTCTCAAATGGACTGATTAAATTGATTGTGGTACTTCTAGTCAGGAAATCTTTAGTAGTGTACTTGTTCTCACTTCTTGGTGTGGTTAAGTGAACCTTACTTATAACAAGATTATTTAGTTTGTCTTGGTTCATTGAAGTTGTCAAAGTTCAACAGATCTGCCCTGATGACCTTCTGGGATTTCTTTTGCAAACATGCAGAGCTACAAAAGATTGATTCAGCTGACAGTTGGCCTTGCAGAAGTGGCAGCATCTTCAAAACATTGCGATTTGATCCTGCAACTTCACAAACGAGTGGCCTTTTTGTTGCCAAGTTCACTAAATTACAGATTTAGAGCATATCTGATCAGTCTCCATGTAGTTCTAAAGATGTGCATTTAACTAGTATATGATTCCATGTGCACGTTAGATGTTCACAAGTAACTGTATGCTTCAAATTCCCGGAGCCATCACTGTTATGGTTTGCGAAGCAAAGTGGTGCAAACTGTCAGCTATGCGAATCTAAACTTGCAATTTGGAAGGTAAAAGCTT]
[+] EMBL CB640995             [                  CCTCCGGCCAGCAGCGACTCGCCGACACATCTTCAAAGAGTCCCGCCGTCGTATGCGTGGCTCCCCTCCCCGGCCTCTCGTCTCGTGGGAGGTCTGGATCGACCGCTTCCTCCGCTCGTCGCGGCGAATCCAACCAACGCCGGCGTCCCTCCGCGCCGCAGCTTCCTGTGCTGAATCTCGCCGCTCCCCGAGTCCGGGAACGCACGGAGCGGGCGCGGCGAGCGGCTGGCACCTTGGTTCAAATCTCGCCGCGAAACTTCTAGTAGCAGGCAGCGGTTTAAATCTCGAATTTATCCATTTTGGTGTTCGGCTGAGCCCCCATGGCCGACGCTAGGTCCGCCCCTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGATGTATTCCATGGTCGACACCATCCCACGATACATAAGGCTAAAACCAGGCATGGAGCCCCATATTCCAGAGATTCAGAGCGAGCTGACGTGCCATCTCAACAAGGTTTCATGGCTGCCAGATTTCTACGCAATTCCGCCTCAAGTTCAGATTGCTAGCTCCATGGCCTATCAGCAAGGAAAGATCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB640144             [                                      GCCGACACATCTTCAAAGACTCCCGCCGTCGTATGCGTGGCTCCCCTCCCCGGCCTCTCGTCTCGTGGGAGGTCTGGATCGACCGCTTCCTCCGCTCGTCGCGGCGAATCCAACCAACGCCGGCGTCCCTCCGCGCCGCAGCTTCCTGTGCTGAATCTCGCCGCTCCCCGAGTCCGGGAACGCACGGAGCGGGCGCGGCGAGCGGCTGGCACCTTGGTTCAAATCTCGCCGCGAAACTTCTAGTAGCAGGCAACGGTTTAAATCTCGAATTTATCCATTTTGGCGTTCGGCTGAGCCCCCATGGCCGACGCTAGGTCCGCCCCTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGATGTATTCCATGGTCGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_4370#0 GTCACGCATCGGCGCCGCCCTCCGGCCAGCAGCGACTCGCCGACACATCTTCAAAGAGTC CCGCCGTCGTATGCGTGGCTCCCCTCCCCGGCCTCTCGTCTCGTGGGAGGTCTGGATCGA CCGCTTCCTCCGCTCGTCGCGGCGAATCCAACCAACGCCGGCGTCCCTCCGCGCCGCAGC TTCCTGTGCTGAATCTCGCCGCTCCCCGAGTCCGGGAACGCACGGAGCGGGCGCGGCGAG CGGCTGGCACCTTGGTTCAAATCTCGCCGCGAAACTTCTAGTAGCAGGCAGCGGTTTAAA TCTCGAATTTATCCATTTTGGTGTTCGGCTGAGCCCCCATGGCCGACGCTAGGTCCGCCC CTGAATCGCTGCCGCCCGCGTTTCTCGAGTTCCTCCAGGAGAATGGCTTGGACCCAATGA TGTATTCCATGGTCGACACCATCCCACGATACATAAGGCTAAAACCAGGCATGGAGCCCC ATATTCCAGAGATTCAGAGCGAGCTGACGTGCCATCTCAACAAGGTTTCATGGCTGCCAG ATTTCTACGCAATTCCGCCTCAAGTTCAGATTGCTAGCTCCATGGCCTATCAGCAAGGAA AGATCTATGGAATTGATGCAGCTTCTGGAGCTGCTGTCTTAGCACTTGATGTTCAACCAG GAGAACATGTTCTGGACCTCTGTGCTGCCCCAGGTGCAAAGCTTTGCATGCTTGCAGATA TGCTTGGAGGCAGAGGTTCTCTGACTGGCGTTGATGTTGCAAAGCACCGTCTTGCGGCCT GTCGTACGATGTTGCAGAAGTATTCTCTCGGAGATCGTTGTCGTCTCTTTGTTGCCGATG GGACTTCATTTTCTATATTACCTGTGAACTCTAGCTTGGGTAATGGAGAAGGATCAACTT GTCATAAGGACAATGGAAGTACATTGTCGGAATGGACTTCAAAGAGATCGTGGAAAGACC GACAAAAGTCTAAAAAGGCAAGAATGGCGGGTTCACCTCATCTAACATCAACTTCAGAAC CTGAACTGATATACTATGGCAAACATTCAGGATTAGTTGGATTACGCAAATGTGATGCTA TTCGTCCATCAGCTGATGATGAAGCCCAGACATCTGGCTATGACAAAGTCCTAGTTGATG CAGAATGTACTCATGATGGATCCATAAAGCACATCCAAAAATTTGAGTTCTGGGGATGGA AAACCTTAGATCGTCGTGTACTTGATGCAGAAAGAACTGATGACCTGCTTCATCTTCAGT TACGCCTTCTCACTAATGGTTTTAAATTATTGAAAACTGGTGGATCACTAGTATATAGTA CTTGCAGGTGAGTAATCTCTTCACATGCAATTCCAATATTTGATGCCTCCTCAATCGCTT CCCAGCTGTGTAGTCACCTTTTCCTATTGCATTTCGTGTCTTACTTAACTACTGATGGCT TGCGTTGAAATAGCTTGACAGTTGCACAAAATGAGAATGTGGTTCAACAGTTTCTTTGCA AACACTCTTCAGCAGGTACAGAATAGCCGTGTTCCTCATTTCAGTATTATGTATATCCCT TATATTTTTACTTTGAAGATGAATATTGTTATTTTTCTCAAATGGACTGATTAAATTGAT TGTGGTACTTCTAGTCAGGAAATCTTTAGTAGTGTACTTGTTCTCACTTCTTGGTGTGGT TAAGTGAACCTTACTTATAACAAGATTATTTAGTTTGTCTTGGTTCATTGAAGTTGTCAA AGTTCAACAGATCTGCCCTGATGACCTTCTGGGATTTCTTTTGCAAACATGCAGAGCTAC AAAAGATTGATTCAGCTGACAGTTGGCCTTGCAGAAGTGGCAGCATCTTCAAAACATTGC GATTTGATCCTGCAACTTCACAAACGAGTGGCCTTTTTGTTGCCAAGTTCACTAAATTAC AGATTTAGAGCATATCTGATCAGTCTCCATGTAGTTCTAAAGATGTGCATTTAACTAGTA TATGATTCCATGTGCACGTTAGATGTTCACAAGTAACTGTATGCTTCAAATTCCCGGAGC CATCACTGTTATGGTTTGCGAAGCAAAGTGGTGCAAACTGTCAGCTATGCGAATCTAAAC TTGCAATTTGGAAGGTAAAAGCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)