cluster # 4387

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Oryza sativa
cluster # 4387 cluster # 4387 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4387#0 length = 589 sequences # 3

consensusID : consensus_4387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 589
fasta sequence

                              [TCATCACCCCGTTGCTCTCGCGCCGCCCTCCCCGCCGAGCCAAAAAGCCTTCCTCCTCGAAATAGCACACCTCTCGCCGCCGCTGGTGCGTGCGTGCGTCGACGCGCGCGATCGATCGATGCCTGTGTCCCTCCGGCGCGTCCACCCACGCCAGCCGGCGAGCCTCGTCGGCGAGTTTCGGGGGCGCTGATTAGATTTGCCCGGTCTCGATCGATTGATCGGTCTCGCCTTCCCGCCGCGCGATGGATCCGCGGGGGAAGGGCAGCATCACGTCGCATGCGTCGGACAAGTCGTCGCGGTCGGGCTCGTTCGAC-TTCGAGCACGACCAGGACCCGGACCGCGACCGCCGCCACGACGACGCCCACCGCCGCGAGGTCGTCGTCAAGATCGAGCCCGAGGCCCACGTGCCGGTGGACCTCCACGCCGGCGGCAGCACGNCGCCAACGCGCCGGGCGTTGGCGGCGTTGCGGTTGGGGGGCGTGGTCCCGGGGTNCGGGTCGGTTTTCGAGCGCGTCGTNCTTGGCCAGGCGGTTGGGGGCAACGGCGAATTCGTTTNAGTTTTAAAGAACCCGACCGCCGAATTTGNCCG]

[+] EMBL C72972               [TCATCACCCCGTTGCTCTCGCGCCGCCCTCCCCGCCGAGCCAAAAAGCCTTCCTCCTCGAAATAGCACACCTCTCGCCGCCGCTGGTGCGTGCGTGCGTCGACGCGCGCGATCGATCGATGCCTGTGTCCCTCCGGCGCGTCCACCCACGCCAGCCGGCGAGCCTCGTCGGCGAGTTTCGGGGGCGCTGATTAGATTTGCCCGGTCTCGATCGATTGATCGGTCTCGNCTTCCCGCCGCGCGATGGATCCGCGGGGGAAGGGCAGCATCACGTCGCATGCGTCGGACAAGTCGTCGCGGTCGGGCTCGTTCGACTTTCGAGCACGANCAGGACC                                                                                                                                                                                                                                                                ]
[+] EMBL AU065000             [                                                                                                                                                                                       GCGCTGATTAGATTTGCCCGGTCTCGATCGATTGATCGGTCTCGCCTTCCCGCCGCGCGATGGATCCGCGGGGGAAGGGCAGCATCACGTCGCATGCGTCGGACAAGTCGTCGCGGTCGGGCTCGTTCGAC TTCGAGCACGACCAGGACCCGGACCGCGACCGCCGCCACGACGACGCCCACCGCCGCGAGGTCGTCGTCAAGATCGAGCCCGAGGCCCACGTGCCGGTGGACCTCCACGCCGGCGGCAGCACGNCGCCAACGCGCCGGGCGTTGGCGGCGTTGCGGTTGGGGGGCGTGGTCCCGGGGTNCGGGTCGGTTTTCGAGCGCGTCGTNCTTGGCCAGGCGGTTGGGGGCAACGGCGAATTCGTTTNAGTTTTAAAGAACCCGACCGCCGAATTTGNCCG]
[+] EMBL AU063791             [                                                                                                                                                                                       GCGCTGATTAGATTTGCCCGGTCTCGATCGATTGATCGGTCTCGCCTTCCCGCCGCGCNATGGATCCGCGGGGNAAGGGCAGCATCACGTCGCATGCTTCGGACAAGTCGTCGCGGTCGGGCTCGTTCGAN TTCNAGCACGACCAGGACCCGGACCGCAACCGCNGCCACGACGACGCCCACCGCCGCAAGGTCGTCGTCAAGNTCGAGCCCGAGGCCCACNTGCCGGTGGACCTCCACGCCGGCGG ATAACGCNGCCAACGCGCCGGG                                                                                                                                        ]




>consensus_4387#0
TCATCACCCCGTTGCTCTCGCGCCGCCCTCCCCGCCGAGCCAAAAAGCCTTCCTCCTCGA
AATAGCACACCTCTCGCCGCCGCTGGTGCGTGCGTGCGTCGACGCGCGCGATCGATCGAT
GCCTGTGTCCCTCCGGCGCGTCCACCCACGCCAGCCGGCGAGCCTCGTCGGCGAGTTTCG
GGGGCGCTGATTAGATTTGCCCGGTCTCGATCGATTGATCGGTCTCGCCTTCCCGCCGCG
CGATGGATCCGCGGGGGAAGGGCAGCATCACGTCGCATGCGTCGGACAAGTCGTCGCGGT
CGGGCTCGTTCGACTTCGAGCACGACCAGGACCCGGACCGCGACCGCCGCCACGACGACG
CCCACCGCCGCGAGGTCGTCGTCAAGATCGAGCCCGAGGCCCACGTGCCGGTGGACCTCC
ACGCCGGCGGCAGCACGNCGCCAACGCGCCGGGCGTTGGCGGCGTTGCGGTTGGGGGGCG
TGGTCCCGGGGTNCGGGTCGGTTTTCGAGCGCGTCGTNCTTGGCCAGGCGGTTGGGGGCA
ACGGCGAATTCGTTTNAGTTTTAAAGAACCCGACCGCCGAATTTGNCCG

clustalw multiple alignements is not computed in this case