cluster # 4420

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Oryza sativa
cluster # 4420 cluster # 4420 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4420#0 length = 609 sequences # 3

consensusID : consensus_4420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 609
fasta sequence

                              [AAAACTTCATG-TGTATTTCTAGTTGTGGCATGATAACTAATAGACCGAGGCTAACTTACTGTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCC-ACAACCCATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCGTTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCATTAGACTTACCATAAGAGTTGGTTGAATTGTTTCAAGACGTATTGCGGTGAAGTAGGTAATCTGTTGGCTGTTTAATATGGCAAAGTTGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGATGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAGAATAAATCG]

[+] EMBL CB965708             [AAAACTTCATGTTGTATTTCTAGTTGTGGCATGATAACTAGTAGACCGAGGCTAACTTACTGTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGACCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCCAACAACCCATCATCGAGACTCAAAGAACCCTAAAGTG                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB966610             [ AAACTTCATG TGTATTTCTAGTTGTGGCATGATAACTAATAGACCGAGGCTAACTTACTGTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCC ACAACCCATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCGTTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCATTAGACTTACCATAAGAGTTGGTTGAATTGTTTCAAGACGTATTGCGGTGAAGTAGGTAATCTGTTGGCTGTTTAATATGGCAAAGTTGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGATGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAGAATAAATC ]
[+] EMBL CB966818             [  AACTTCA G TGTA TTCTAG TGTGGCATGATAACTAATAGACCGAGGCTAACTTAC G TGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGGTCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGTTCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACGGACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCC ACAACCCATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCGTTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCATTAGACTTACCATAAGAGTTGGTTGAATAGTTTCAAGACGTATTGCGGTGAAGTAGGTAATCTGTGGGCTGTTTAATATGGCAAAGTAGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGATGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAGAATAAATCG]




>consensus_4420#0
AAAACTTCATGTGTATTTCTAGTTGTGGCATGATAACTAATAGACCGAGGCTAACTTACT
GTTGAACGCCGTATCATCAATAATCCCTACATCTGCAAATCTGTCTCCATTAGCCACTGG
TCATTGTCAAGGCTACTGATGGACGAAGATCATGCAAGATGCAAAGGAGTATGCAATAGT
TCAGACAAGCCGGTATACTCAGTCATCTCGACCGGCCCTGGATACTAACAGCCCAGAACG
GACTACTAGCGGCCCGGACACTGGAGTCTTCATAACACTCGTGAGAGAAACTCCACAACC
CATCATCGAGCCTCAAAGAACCCTAAAGTGCGGGAGAGTGACTTGGTCAAGAAGAAGTCG
TTGAATGGATAGAACTTATGTCATCATGCAATACAACCCCTTTGACCTTGCAGCTTCGCA
TTAGACTTACCATAAGAGTTGGTTGAATTGTTTCAAGACGTATTGCGGTGAAGTAGGTAA
TCTGTTGGCTGTTTAATATGGCAAAGTTGTTTTGGAGTAGCAAAAGCGCCTGTTTCCTGA
TGAAAACGACATCACCCGAAGACTAGTCAATAATTCCAGAAAAAGCTACCAACAGCATAG
AATAAATCG

clustalw multiple alignements is not computed in this case