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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4428 cluster # 4428       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4428#0 length = 1127 sequences # 3  

consensusID : consensus_4428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1127
fasta sequence
                              [CTCCTCTTTTGCAGCTGATGTGGTCCAAGGACATTATTGTTGCAAATATAACATTGAAGAATTCACCTTTCTGGCACTTCCACCCATATGATTGCACGAATATAACTGTTTCTAATGTTACTATCTTAGCTCCTATTTCTAGTGCTCCAAACACAGATGGCATAGATCCAGATTCTTGTCAGGATGTGCTTATTGAGAATTGCTACATTTCAGTTGGTGATGATGCCATAGCGGTAAAGAGTGGGTGGGATCAATATGGGATTGCATATGGGCGCCCATCTCGTAACATTGTGATACGCAATGTAATGGCTCGTTCATTGGTCAGTGCTGGAATTTCAATTGGCAGTGAGATGTCTGGTGGGATTGCAAATGTTACAGTGGAGGATGTCCGCATTTGGGAGTCACGGCGAGGTTTGAGAATAAAGACTGCCATAGGAAGAGGGGGCTACATCCGCGATATCTCCTATCGCAACATGACCTTCGACAATGTCCGTGCTGGTATTGTGATAAAGGTTGACTACAATGAGCACGCTGATGATGGGTATGACCGGGATGCCTTTCCAGACATCACAAACATATCATTCAAGGAAATACATGGGCGAGGTGTCCGGGTGCCAGTCCGTGCTCATGGCAGCAGTGACATTCCCATCAAGGACATCAGCTTTCAGGACATGTCTATCGGCATCAGCTACAAGAAGAAACATATTTTCCAGTGTTCCTTCATTGAGGGGCGTGTCATCGGGTCAGTGTTTCCAAAACCATGCGAGAATTTGGATCTCTACAATGAGCAAGGGCAGCTTGTTAAGCGTGCAGCAATGGTAAACAGCACGGAAGTTGATTATGACATATGATGATATAGGTGGCTAAGGCTAACAGCAGAACATGGGTGGCATTCCCATCCTCATTTTTGTTCTTTTAGTCTTTCTGTGT-TTTTTGAGATTAGAACTGTATATACATAGGAGATTCACCTCTTCATAGGTTTGAATGCAGTGGCTAATTGTATCTCTCATTTCATTTGTCCACCAGCATTTTGTTCTTGCTGCCAAACATGTAATACAACCTTGCAATCTTAGAAATACACTTGGCCATTCACCATCCCTGCCCAACTGAAAGTAAAAGATGTTAAT]

[+] EMBL AK058942             [CTCCTCTTTTGCAGCTGATGTGGTCCAAGGACATTATTGTTGCAAATATAACATTGAAGAATTCACCTTTCTGGCACTTCCACCCATATGATTGCACGAATATAACTGTTTCTAATGTTACTATCTTAGCTCCTATTTCTAGTGCTCCAAACACAGATGGCATAGATCCAGATTCTTGTCAGGATGTGCTTATTGAGAATTGCTACATTTCAGTTGGTGATGATGCCATAGCGGTAAAGAGTGGGTGGGATCAATATGGGATTGCATATGGGCGCCCATCTCGTAACATTGTGATACGCAATGTAATGGCTCGTTCATTGGTCAGTGCTGGAATTTCAATTGGCAGTGAGATGTCTGGTGGGATTGCAAATGTTACAGTGGAGGATGTCCGCATTTGGGAGTCACGGCGAGGTTTGAGAATAAAGACTGCCATAGGAAGAGGGGGCTACATCCGCGATATCTCCTATCGCAACATGACCTTCGACAATGTCCGTGCTGGTATTGTGATAAAGGTTGACTACAATGAGCACGCTGATGATGGGTATGACCGGGATGCCTTTCCAGACATCACAAACATATCATTCAAGGAAATACATGGGCGAGGTGTCCGGGTGCCAGTCCGTGCTCATGGCAGCAGTGACATTCCCATCAAGGACATCAGCTTTCAGGACATGTCTATCGGCATCAGCTACAAGAAGAAACATATTTTCCAGTGTTCCTTCATTGAGGGGCGTGTCATCGGGTCAGTGTTTCCAAAACCATGCGAGAATTTGGATCTCTACAATGAGCAAGGGCAGCTTGTTAAGCGTGCAGCAATGGTAAACAGCACGGAAGTTGATTATGACATATGATGATATAGGTGGCTAAGGCTAACAGCAGAACATGGGTGGCATTCCCATCCTCATTTTTGTTCTTTTAGTCTTTCTGTGT TTTTTGAGATTAGAACTGTATATACATAGGAGATTCACCTCTTCATAGGTTTGAATGCAGTGGCTAATTGTATCTCTCATTTCATTTGTCCACCAGCATTTTGTTCTTGCTGCCAAACATGTAATACAACCTTGCAATCTTAGAAATACACTTG                                           ]
[-] EMBL CB639037             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACATGGGCGAGGTGTCCGGGTGCCAGTCCGTGCTCATGGCAGCAGTGACATTCCCATCAAGGACATCAGCTTTCAGGACATGTCTATCGGCATCAGCTACAAGAAGAAACATATTTTCCAGTGTTCCTTCATTGAGGGGCGTGTCATCGGGTCAGTGTTTCCAAAACCATGCGAGAATTTGGATCTCTACAATGAGCAAGGGCAGCTTGTTAAGCGTGCAGCAATGGTAAACAGCACGGAAGTTGATTATGACATATGATGATATAGGTGGCTAAGGCTAACAGCAGAACATGGGTGGCATTCCCATCCTCATTTTTGTTCTTTTAGTCAATCAGTATATTTTTGAGATTAGAACTGTATATACATAGGAGATTCACCTATTAATAGGTTTGAATGCAGTGGCTAATTGTATCTCTCATTTCATTTGTCCACCAGCATTTTGTTCTTGCTGCCAAACATGTAATACAACCTTGCAATTTTAGAAATACACTTGGCCATTCACCATCCCTGCCCAACTGAAAGTAAAAGATGTTAAT]
[+] EMBL CA764130             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGGATCTCTACAATGAGCAAGGGCAGCTTGTTAAGCGTGCAGCAATGGTAAACAGCACGGAAGTTGATTATGACATATGATGATATAGGTGGCTAAGGCTAACAGCAGAACATGGGTGGCATTCCCATTCTCATTTTTGTTCTTTTAGTCTTTCTGTGT TTTTTGAGATTAGAACTGTATATACATAGGAGATTCACCTCTTCATAGGTTTGAATGCAGTGGCTAATTGTATCTCTCATTTCATTTGTCCACCAGCATTTTGTTCTTGCTGCCAAACATGTAATACAACCTTGCAATCTTAGAAAa                                                  ]


>consensus_4428#0 CTCCTCTTTTGCAGCTGATGTGGTCCAAGGACATTATTGTTGCAAATATAACATTGAAGA ATTCACCTTTCTGGCACTTCCACCCATATGATTGCACGAATATAACTGTTTCTAATGTTA CTATCTTAGCTCCTATTTCTAGTGCTCCAAACACAGATGGCATAGATCCAGATTCTTGTC AGGATGTGCTTATTGAGAATTGCTACATTTCAGTTGGTGATGATGCCATAGCGGTAAAGA GTGGGTGGGATCAATATGGGATTGCATATGGGCGCCCATCTCGTAACATTGTGATACGCA ATGTAATGGCTCGTTCATTGGTCAGTGCTGGAATTTCAATTGGCAGTGAGATGTCTGGTG GGATTGCAAATGTTACAGTGGAGGATGTCCGCATTTGGGAGTCACGGCGAGGTTTGAGAA TAAAGACTGCCATAGGAAGAGGGGGCTACATCCGCGATATCTCCTATCGCAACATGACCT TCGACAATGTCCGTGCTGGTATTGTGATAAAGGTTGACTACAATGAGCACGCTGATGATG GGTATGACCGGGATGCCTTTCCAGACATCACAAACATATCATTCAAGGAAATACATGGGC GAGGTGTCCGGGTGCCAGTCCGTGCTCATGGCAGCAGTGACATTCCCATCAAGGACATCA GCTTTCAGGACATGTCTATCGGCATCAGCTACAAGAAGAAACATATTTTCCAGTGTTCCT TCATTGAGGGGCGTGTCATCGGGTCAGTGTTTCCAAAACCATGCGAGAATTTGGATCTCT ACAATGAGCAAGGGCAGCTTGTTAAGCGTGCAGCAATGGTAAACAGCACGGAAGTTGATT ATGACATATGATGATATAGGTGGCTAAGGCTAACAGCAGAACATGGGTGGCATTCCCATC CTCATTTTTGTTCTTTTAGTCTTTCTGTGTTTTTTGAGATTAGAACTGTATATACATAGG AGATTCACCTCTTCATAGGTTTGAATGCAGTGGCTAATTGTATCTCTCATTTCATTTGTC CACCAGCATTTTGTTCTTGCTGCCAAACATGTAATACAACCTTGCAATCTTAGAAATACA CTTGGCCATTCACCATCCCTGCCCAACTGAAAGTAAAAGATGTTAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)