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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4449 cluster # 4449       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4449#0 length = 822 sequences # 3  

consensusID : consensus_4449#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 822
fasta sequence
                              [GAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCGCAGAACTTCTATAACCGCCAGCAAGGGTTGTGGAAAAGCCGCACTATTTCGGCAAATGACCTGGAAAATGCCCGCTCCTCGCGCGACCAGGCGCAGGCAACGCTGAAATCAGCACAGGATAAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCTCAGGCGAAAGCCAGCCTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGTTGAATTTACAGGACTCAACGTTGATAGCCCCGTCTGATGGCACGCTGTTAACGCGCGCGGTGGAGCCAGGCACGGTCCTCAATGAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCGGTGTGGGTGCGCGCTTATGTTGATGAACGTAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGGTCGCCCGGACAAGCCGTATCACGGGCAGATTGGTTTCGTTT-CGCCGACTGCTGAATTTACCCCGAAAACCGTCGAAACGCCGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCAGTGACGGTACAAT-GAGGGGACGAGGCATGACATGAATGATGCCGTTATCACGCTGAGCGGCCTGGAAAAACGCTTTCCGGGCATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCATTCACGCCGGTTATGTGACGGGGTTGGTGGGGCCGGACGGTGCAGGTAAAACCACGCTGATGCG]

[+] EMBL CF306534             [GAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCGCAGAACTTCTATAACCGCCAGCAAGGGTTGTGGAAAAGCCGCACTATTTCGGCAAATGACCTGGAAAATGCCCGCTCCTCGCGCGACCAGGCGCAGGCAACGCTGAAATCAGCACAGGATAAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCTCAGGCGAAAGCCAGCCTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGTTGAATTTACAGGACTCAACGTTGATAGCCCCGTCTGATGGCACGCTGTTAACGCGCGCGGTGGAGCCAGGCACGGTCCTCAATGAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCGGTGTGGGTGCGCGCTTATGTTGATGAACGTAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGGTCGCCCGGACAAGCCGTATCACGGGCAGATTGGTTTCGTTT CGCCGACTGCTGAATTTACCCCGAAAACCGTCGAAACGCCGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAA                                                                                                                                                                                             ]
[+] EMBL CF307024             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATCACGGGCAGAGTGGTTTCGTTTGCGCCGACTGCTGAATTTACCCCGAAAACCGGCGAAACGCCGGATCTGCGTACCGACCTCGTCTATGGCCTGCGTATTGGGGTGACCGACGCCGGTGATGCGTTACGCCAGGGAATGCCAGTGACGGTACAATAGAGGGGACGAGGCATGACATGAATGATGCCGTTATCACGCTGAGCGGCCTGGAAAAACGCTTTCCGGGCATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCAT                                                               ]
[-] EMBL CF324450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACCGTCGAAACGCCGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCAGTGACGGTACAAT TCGGTGACGAGGCAGGACATGAATGATGCCGTTATCACGCTGAACGGCCTGGAAAAACGCTTTCCGGGCATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCATTCACGCCGGTTATGTGACGGGGTTGGTGGGGCCGGACGGTGCAGGTAAAACCACGCTGATGCG]


>consensus_4449#0 GAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCG CAGAACTTCTATAACCGCCAGCAAGGGTTGTGGAAAAGCCGCACTATTTCGGCAAATGAC CTGGAAAATGCCCGCTCCTCGCGCGACCAGGCGCAGGCAACGCTGAAATCAGCACAGGAT AAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCTCAGGCGAAAGCCAGC CTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGTTGAATTTACAGGACTCAACGTTG ATAGCCCCGTCTGATGGCACGCTGTTAACGCGCGCGGTGGAGCCAGGCACGGTCCTCAAT GAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCGGTGTGGGTGCGCGCTTATGTT GATGAACGTAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGGT CGCCCGGACAAGCCGTATCACGGGCAGATTGGTTTCGTTTCGCCGACTGCTGAATTTACC CCGAAAACCGTCGAAACGCCGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTG GTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCAGTGACGGTACAATGAGGGGAC GAGGCATGACATGAATGATGCCGTTATCACGCTGAGCGGCCTGGAAAAACGCTTTCCGGG CATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCATTCACGCCGGTTATGTGACGGG GTTGGTGGGGCCGGACGGTGCAGGTAAAACCACGCTGATGCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)