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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4473 cluster # 4473       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4473#0 length = 1031 sequences # 3  

consensusID : consensus_4473#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1031
fasta sequence
                              [GTCACNNTCATNTAAATCCCTCCATAGCACAGTATACACAANNGCTGTGAATANACCTATTCGAGCTCTGGTCCTAGCATTACCNACAGTCATCCATAGTACTAGAGGCTAGGATGTANACATNNTCACTATCTAAANAAGTANCTATNACTATANAATGCATAATAAAGGAAATACTGGTGTTAGTAANACAGTGNACATATGTATAGGGAGAANATAGCCCATCCATCTGGATGCTTGCCTCAAGGNACTATCTGTTATATTTCTCTTGTGAATGTTGTACTGAAANACACCAATCATTTACTTGCTTAAAGATGATAGCTTGATGCAAATTTATTCCCCATTCATATTGGTTCTACATGGTACATGCTCATCAAATGATTTGAAGAGCAAGGATAGGATAAGAAACAATCTTCAGCTTACTATATCTTACTCATATATTCTTGTATGAGGACCCTCCATCTTCTTCTTTTTTTCTCACTTCATTTTTTTAATAGTTAAGATTAATTAGTATGTATACCAGTGAGAATTCTAATAGTCTAGTTCCTTGGAATTCGATGTCAGATAAACATAGCTCGTGATCTCTTAATGAAATGACCGTCAGGTAACTTAACTACTATTGGCCATAATGTTCGTGTAGAAGTATCTAAGTACATTCTTTTAGGAATGTGACACCATAGCACTCCCTATAGAGTCTAGATCACCACAACGAAGGCATGCCAAGAAAAGGGTCAGCGCTTCCACTTTCGGAGATCATGAGAGTTACACAAGAATCTGCAAGAAAAAGCAGACCGAAAGGAATCTAACTTTATCCTCCATCTGAAATGTTCTACACCATGTTGGGGTTCCTAAGCTTTTCCTAGATCCTACTGGTTAATCATACTCCACTTTGCCCTTACCTCTCACATCACACTCTATCCTTCATATCCCTACCTAAATAAAGCAAAAACAAGGAACATTTCGTACTAAAAGATCCATCCAGTTACAGTAGCCAAATATTTTCATTCGAGTTTGTGCATAGTATTAGCAGA]

[-] EMBL CA752990             [GTCACNNTCATNTAAATCCCTCCATAGCACAGTATACACAANNGCTGTGAATANACCTATTCGAGCTCTGGTCCTAGCATTACCNACAGTCATCCATAGTACTAGAGGCTAGGATGTANACATNNTCACTATCTAAANAAGTANCTATNACTATANAATGCATAATAAAGGAAATACTGGTGTTAGTAANACAGTGNACATATGTATAGGGAGAANATAGCCCATCCATCTGGATGCTTGCCTCAAGGNACTATCTGTTATATTTCTCTTGTGAATGTTGTACTGAAANACACCAATCATTTACTTGCTTAAAGATGATAGCTTGATGCAAATTTATTTTCCATTCATATTGGTTCTACATGGTACATGCTCATCAAATGATTTGAAGAGCAAGGATAGGATAAGAAACAATCTGCAGCTTACTATATCTTACTCATATATTCTTGTATGAGTACCCTCCATCTTCTTCTTTTTTTCTCACTTCATTTTTTTAATAGTTAAGATTAATTAGTATGTATACCAGTGAGAATTCTAATAGTCTAGTTCCTTGGAATTCGATGTCAAATAAACATAGCTCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB654527             [                                                                                                                                                                                                                                                                                                                               AGCTTGATGCAAATTTATTCCCTATATATATTGGTTCTACATGGTACATGCTCATCAAATGATTTGAAGAGCAAGGATAGGATAAGAAACAATCTTCAGCTTACTATATCTTACTCATATATTCTTGTATGAGGACCCTCCATCTTCTTCTTTTTTTCTCACTTCATTTTTTTAATAGTTAAGATTAATTAGTATGTATACCAGTGAGAATTCTAATAGTCTAGTTCCTTGGAATTCGATGTCAGATAAACATAGCTCGTGATCTCTTAATGAAATGACCGTCAGGTAACTTAACTACTATTGGCCATAATGTTCGTGTAGAAGTATCTAAGTACATTCTTTTAGGAATGTGACACCATAGCACTCCCTATAGAGTCTAGATCACCACAACGAAGGCATGCCAAGAAAAGGGTCAGCGCTTCCACTTTCGGAGATCATGAGAGTTACACAAGAATCTGCAAGAAAAAGCAGACCGAAAGGAATCTAACTTTATCCTCCATCTGAAATGTTCTACACCATGTTGGGGTTCCTAAGCTTTTCCTAGATCCTACTGGTTAATCATACTCCACTTTGCCCTTACCTCTCACATCACACTCTATCCTTCATATCCCTACCTAAATAAAGCAAAAACAAGGAACATTTCGTACTAAAAGATCCATCCAGTTACAGTAGCCAAATATTTTCATTCGAGTTTGTGCATAGTATTAGCAGA]
[+] EMBL CB654526             [                                                                                                                                                                                                                                                                                                                                gatgGATGCAAATTTATTCCCCTTTCATATTGGTTCTACATGGCACATGCTCCTCAAATGATTTGAAGAGCAAGGATAGGATAAGAAACCATCTTCAGCTTACTATATCTTACTCGTATATTCTTGTATGAGGACCCTCCATCTTCTTCTTTTTTTCTCACTTCATTTTTTTAATAGCTAAGATTAATTAGTATGTATACCAGTGAGAATTCTAATAGTCTAGTTCCTTGGAATTCGATGTCAGATAAACATAGCTCGTGATCTCTTAATGAAATGACCGTCAGGTAACTTAACTACTATTGGCCATAATGTTCGTGTAGAAGTATCTAAGTACATTCTTTTAGGAATGTGACACCATAGCACTCCCTATAGAGTCTAGATCACCACAACGAAGGCATGCCAAGAAAAGGGTCAGCGCTTCCACTTTCGGAGATCATGAGAGTTACACAAGAATCTGCAAGAAAAAGCAGACCGAAAGGAATCTAACTTTATCCTCCATCTGAAATGTTCTACACCATGTTGGGGTTCCTAAGCTTTTCCTAAATCCTACTGGTTAATCATACTCCACTTTGCCCTTACCTCTCACATCACACTCTATCCTTCATATCCCTACCTAAATAAAGCAAAAACAAGGAACATTTCGTACTAAAAGATCCATCCAGTTACAGT                                          ]


>consensus_4473#0 GTCACNNTCATNTAAATCCCTCCATAGCACAGTATACACAANNGCTGTGAATANACCTAT TCGAGCTCTGGTCCTAGCATTACCNACAGTCATCCATAGTACTAGAGGCTAGGATGTANA CATNNTCACTATCTAAANAAGTANCTATNACTATANAATGCATAATAAAGGAAATACTGG TGTTAGTAANACAGTGNACATATGTATAGGGAGAANATAGCCCATCCATCTGGATGCTTG CCTCAAGGNACTATCTGTTATATTTCTCTTGTGAATGTTGTACTGAAANACACCAATCAT TTACTTGCTTAAAGATGATAGCTTGATGCAAATTTATTCCCCATTCATATTGGTTCTACA TGGTACATGCTCATCAAATGATTTGAAGAGCAAGGATAGGATAAGAAACAATCTTCAGCT TACTATATCTTACTCATATATTCTTGTATGAGGACCCTCCATCTTCTTCTTTTTTTCTCA CTTCATTTTTTTAATAGTTAAGATTAATTAGTATGTATACCAGTGAGAATTCTAATAGTC TAGTTCCTTGGAATTCGATGTCAGATAAACATAGCTCGTGATCTCTTAATGAAATGACCG TCAGGTAACTTAACTACTATTGGCCATAATGTTCGTGTAGAAGTATCTAAGTACATTCTT TTAGGAATGTGACACCATAGCACTCCCTATAGAGTCTAGATCACCACAACGAAGGCATGC CAAGAAAAGGGTCAGCGCTTCCACTTTCGGAGATCATGAGAGTTACACAAGAATCTGCAA GAAAAAGCAGACCGAAAGGAATCTAACTTTATCCTCCATCTGAAATGTTCTACACCATGT TGGGGTTCCTAAGCTTTTCCTAGATCCTACTGGTTAATCATACTCCACTTTGCCCTTACC TCTCACATCACACTCTATCCTTCATATCCCTACCTAAATAAAGCAAAAACAAGGAACATT TCGTACTAAAAGATCCATCCAGTTACAGTAGCCAAATATTTTCATTCGAGTTTGTGCATA GTATTAGCAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)