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Oryza sativa
cluster # 4477 cluster # 4477       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4477#0 length = 914 sequences # 3  

consensusID : consensus_4477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 914
fasta sequence
                              [TCCCCATCTCTCTCTCACTCAAAACAACGTCGGCGGCAGCGCCTCTCCCCAACCTTCCTCCCACCAGCGCCGCCGCTCCCCCTCCCCCTCCCTCCACCGGTGACCGGCGCCACCGCTCCATCTCCCCCTCTTCCTCCTGTCTCACCGGCACGGCGCGGCGACTGGGAGGGGACCCACCAGCAGCGCCGCTTCCCCTCGGCCACTCCCCCCTTCCTCCACCGGCGGCGCTCTCCTTCCGGCACGAATCCGGCGG-CGGCGGC-GGCTCCC-TCAA-CCCCTTGTCACCTCCCTCCCGCGGTATATCCGGCGGCGGTGGCGGTGGCGGTGGCGGCGTCGGCGGGAGGAGGTGGATCCGGCAGTGGCGGCGGTGGCTCCCTCCGCCCCCTCTCGCCTCCCTCCTGCGGCAGATCTAGCGGCGGTGGCGGCCTCGCGGCGGCCATGGGTGGATCCAGTGGTGGTGGCGGCTGCGGAGGACAGATCCGGCGACAGCGGCGGCGGCTCCCTCTGCCCCCTCTCGCTTCCCTCCCTCGGCTGAAACGACGGTGGTGGCGGGCGTCGGCAGCGCAGCTCGGCAAGCCACTGCCGGCGGCCACTCCGCGCCCCTTCACCGGTTTTGGCCATGGGAGGCGGTGGCAGCAGAGGCGGCTATGGAAAAATCTGCTCGATTTCTGTTCGATTTGTTTTTTTTTATCTCCGTTTGCTGTTCTTCTATTCTTATATTTGGGATCTAACATAAACTGGATTAAAACTTTGTGTGTTATTTGATGCGCACTCTGGATGATTTGTTGTTTGTTGGACTTATGATGTTGCGGACGAAATTTTTTTAATTAGGTTAGGTATATATTTGGGAGGGAGCTATCGGGGTGGGAATCGGACATAAAATTTGGGTGCTACGGATGCGATCGATCTGAGAAAAA]

[+] EMBL AK063231             [TCCCCATCTCTCTCTCACTCAAAACAACGTCGGCGGCAGCGCCTCTCCCCAACCTTCCTCCCACCAGCGCCGCCGCTCCCCCTCCCCCTCCCTCCACCGGTGACCGGCGCCACCGCTCCATCTCCCCCTCTTCCTCCTGTCTCACCGGCACGGCGCGGCGACTGGGAGGGGACCCACCAGCAGCGCCGCTTCCCCTCGGCCACTCCCCCCTTCCTCCACCGGCGGCGCTCTCCTTCCGGCACGAATCCGGCGG CGGCGGC GGCTCCC TCAA CCCCTTGTCACCTCCCTCCCGCGGTATATCCGGCGGCGGTGGCGGTGGCGGTGGCGGCGTCGGCGGGAGGAGGTGGATCCGGCAGTGGCGGCGGTGGCTCCCTCCGCCCCCTCTCGCCTCCCTCCTGCGGCAGATCTAGCGGCGGTGGCGGCCTCGCGGCGGCCATGGGTGGATCCAGTGGTGGTGGCGGCTGCGGAGGACAGATCCGGCGACAGCGGCGGCGGCTCCCTCTGCCCCCTCTCGCTTCCCTCCCTCGGCTGAAACGACGGTGGTGGCGGGCGTCGGCAGCGCAGCTCGGCAAGCCACTGCCGGCGGCCACTCCGCGCCCCTTCACCGGTTTTGGCCATGGGAGGCGGTGGCAGCAGAGGCGGCTATGGAAAAATCTGCTCGATTTCTGTTCGATTTGTTTTTTTTTATCTCCGTTTGCTGTTCTTCTATTCTTATATTTGGGATCTAACATAAACTGGATTAAAACTTTGTGTGTTATTTGATGCGC                                                                                                                                                   ]
[+] EMBL C27816               [       CTCTCTCTCACTCAAAACAACGTCGGCGGCA  GCCTCTCCCCAACCTTCCTCCCACCAGCGCCNCCGCTCCCCCTCCCCCTCCCTCCACCGGTGACC GCGCCACCGCTCCATCTCCCCCTCTTCCTCCTGTCTCACCGGCAC GCGCGGCGACTGGGAGGGGACCCACCAGCAGCG CGCTTCCCCTCGGCCACTNCCCCCTTCCTCCACCGGCGGCGCTCTCCTTCCGGCACGAATCCGGCGG CGGC GC NGCTCCC TCAA C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU078616             [                                                                                                                                                                                                                                 CGCTNTCCTTCCGGCACGAATCCGGCGGCCGNCGGCGGGCTCCCTTCAACCCCCTTGTCACNTCCCTCCCGCGGTATATCCGNCGCCGGTGCCGGTGCCGGTGCCGGCGTCGGCGGAAGAAGGTGGATCCGGCAGTGCCGCCGGTGGCTCCCTCCGCCCCCTCTCGCCTCCCTCCTGCGGCAGATCTAGCGGCGGTGNCGGCCTCGCGGCGGCCATGGGTGGATCCAGTGGTGGTGNCGGCTGCGGAGG CAGATCCGGCGACAGCGGCGGCGGCTCCCTCTGCCCCCTCTCGCTTCCCTCCCTCGGCTGAAACGACGGTGGT GCGGGCGTCGGCAGCGCAGCTCGGCAAGCCACTGCCGGCGGCCACTCCGCGCCCCTTCACCGGTTTTGGCCATGGGAGGCGGTGGCAGCAGAGGCGGCTATGGAAAAATCTGCTCGATTTCTGTTCGATTTG TTTTTTTTATCTCCGTTTGCTGTTCTTCTATTCTTATATTTGGGATCTAACATAAACTGGATTAAAACTTTGTGTGTTATTTGATGCGCACTCTGGATGATTTGTTGTTTGTTGGACTTATGATGTTGCGGACGAAATTTTTTTAATTAGGTTAGGTATATATTTGGGAGGGAGCTATCGGGGTGGGAATCGGACATAAAATTTGGGTGCTACGGATGCGATCGATCTGAGAAAAA]


>consensus_4477#0 TCCCCATCTCTCTCTCACTCAAAACAACGTCGGCGGCAGCGCCTCTCCCCAACCTTCCTC CCACCAGCGCCGCCGCTCCCCCTCCCCCTCCCTCCACCGGTGACCGGCGCCACCGCTCCA TCTCCCCCTCTTCCTCCTGTCTCACCGGCACGGCGCGGCGACTGGGAGGGGACCCACCAG CAGCGCCGCTTCCCCTCGGCCACTCCCCCCTTCCTCCACCGGCGGCGCTCTCCTTCCGGC ACGAATCCGGCGGCGGCGGCGGCTCCCTCAACCCCTTGTCACCTCCCTCCCGCGGTATAT CCGGCGGCGGTGGCGGTGGCGGTGGCGGCGTCGGCGGGAGGAGGTGGATCCGGCAGTGGC GGCGGTGGCTCCCTCCGCCCCCTCTCGCCTCCCTCCTGCGGCAGATCTAGCGGCGGTGGC GGCCTCGCGGCGGCCATGGGTGGATCCAGTGGTGGTGGCGGCTGCGGAGGACAGATCCGG CGACAGCGGCGGCGGCTCCCTCTGCCCCCTCTCGCTTCCCTCCCTCGGCTGAAACGACGG TGGTGGCGGGCGTCGGCAGCGCAGCTCGGCAAGCCACTGCCGGCGGCCACTCCGCGCCCC TTCACCGGTTTTGGCCATGGGAGGCGGTGGCAGCAGAGGCGGCTATGGAAAAATCTGCTC GATTTCTGTTCGATTTGTTTTTTTTTATCTCCGTTTGCTGTTCTTCTATTCTTATATTTG GGATCTAACATAAACTGGATTAAAACTTTGTGTGTTATTTGATGCGCACTCTGGATGATT TGTTGTTTGTTGGACTTATGATGTTGCGGACGAAATTTTTTTAATTAGGTTAGGTATATA TTTGGGAGGGAGCTATCGGGGTGGGAATCGGACATAAAATTTGGGTGCTACGGATGCGAT CGATCTGAGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)