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Oryza sativa
cluster # 4486 cluster # 4486       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4486#0 length = 2696 sequences # 1  
consensus_4486#1 length = 1518 sequences # 2  

consensusID : consensus_4486#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2696
fasta sequence
                              [GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAATACCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTTTGATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGACATCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTAAGTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGCACGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCAATACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCGATGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGTTTTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACATTTAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATTAATCTTAAAAACATAGATTTTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTGTACTCACCCATTGTTCTGTTAGTACTTTGAAGTACATGCTCTTATGTTTCACCTACTTTTCTAAAATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAACAAGTGATTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAACATTATTTGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCATGATTTCAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACTATAGAGAAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTCTCCGTTCATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGATTTAATTTGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAACAAATATTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAATTCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCTGC]

[+] EMBL AK106521             [GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAATACCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTTTGATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGACATCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTAAGTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGCACGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCAATACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCGATGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGTTTTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACATTTAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATTAATCTTAAAAACATAGATTTTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTGTACTCACCCATTGTTCTGTTAGTACTTTGAAGTACATGCTCTTATGTTTCACCTACTTTTCTAAAATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAACAAGTGATTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAACATTATTTGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCATGATTTCAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACTATAGAGAAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTCTCCGTTCATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGATTTAATTTGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAACAAATATTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAATTCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCTGC]


>consensus_4486#0 GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACG ACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGC TCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCG GCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTGA TATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAAG GTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGA AACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACA TATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAG ACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAA ACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATC AAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTG AGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCC GCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAATA CCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTTT GATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGACA TCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTAA GTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGCA CGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCAA TACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCGA TGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGTT TTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATC AGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGA TCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACATT TAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATTAATCTTAAAAACAT AGATTTTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTGTACT CACCCATTGTTCTGTTAGTACTTTGAAGTACATGCTCTTATGTTTCACCTACTTTTCTAA AATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAACAAGTGA TTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAACATTATT TGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCATGATTT CAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACTATAGAG AAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTCTCCGTT CATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGATTTAATT TGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGA TATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACA GGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAACAAATA TTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCT CGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTG GATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGT TCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGGCTCCCC GAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCT TGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAA GAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGT AGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCT TTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAAT TCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCTGC



consensusID : consensus_4486#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1518
fasta sequence
                              [AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAG-TGATATTGAATGAGTTTGGAGAGGAAATTGGGG-TTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAGTACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAAT]

[+] EMBL AK102627             [AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAG TGATATTGAATGAGTTTGGAGAGGAAATTGGGG TTGAAAGAGCAATGATCAATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCAGTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAGTACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCCTCAAAT]
[+] EMBL CA305775             [                                                                                                                   CGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGNCATCACTGGCTACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTNCAGTTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTTGAAAGAGCAATGATCAATGAGGGGCAAGGCGGCTCACTTGCTGAACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_4486#1 AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGAC GACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCG CTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCC GGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTG ATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAA GGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTG AAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCAC ATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTA GACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAA AACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCAT CAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTT GAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTC CGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGAATTCA TCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCCGTCATGAT AACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTAAGGTGGAA TCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATCGTTGTAAA GGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCAGTGAGGGAAGTT TATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTT GTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCAC TGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAGTACTGCAAG GAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTG ACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCG CCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAG AAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGA ACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTT GAAATCTGATCCTCAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4486#0      -GGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGAC 59
consensus_4486#1      AGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGGAGGACGAC 60
                       ***********************************************************

consensus_4486#0      GACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCG 119
consensus_4486#1      GACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTCCTCCGCCG 120
                      ************************************************************

consensus_4486#0      CTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCC 179
consensus_4486#1      CTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACCTCGGCGCC 180
                      ************************************************************

consensus_4486#0      GGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTG 239
consensus_4486#1      GGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAATTGCAGTG 240
                      ************************************************************

consensus_4486#0      ATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAA 299
consensus_4486#1      ATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATGAGGGGCAA 300
                      ************************************************************

consensus_4486#0      GGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTTGCACGGTG 359
consensus_4486#1      GGTGGCGCGCTTGTTGAAGAGTGGGTGGAGCTGGCAAATGGATGTGTTTGTTGCACGGTG 360
                      ************************** *********************************

consensus_4486#0      AAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCAC 419
consensus_4486#1      AAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAATGGATCAC 420
                      ************************************************************

consensus_4486#0      ATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTA 479
consensus_4486#1      ATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTCTTTGGCTA 480
                      ************************************************************

consensus_4486#0      GACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAA 539
consensus_4486#1      GACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTGATGCAAAA 540
                      ************************************************************

consensus_4486#0      AACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCAT 599
consensus_4486#1      AACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAGCATTTCAT 600
                      ************************************************************

consensus_4486#0      CAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTT 659
consensus_4486#1      CAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAGGCAGTCTT 660
                      ************************************************************

consensus_4486#0      GAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTC 719
consensus_4486#1      GAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGCAGTCTGTC 720
                      ************************************************************

consensus_4486#0      CGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAGGTCAAT 779
consensus_4486#1      CGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCAAG---AAT 777
                      ******************************************************   ***

consensus_4486#0      ACCTAGCTCGAAACTTGCATTTTGTTATTTCTTTGTATTCAATGCAGAGGAATCTGTCTT 839
consensus_4486#1      TCATCGC-----AGCTGCAAG-----AACTTCTGGAGTACAGTAAATCAGTACC---ACC 824
                       * * **     *  ****       *  *  * *  * ** *  *   * * *      

consensus_4486#0      TGATTTTGTTTTTGGACAAAAAAAAGACTAACTTTGATTAGTTAATTGATTAAGTATGAC 899
consensus_4486#1      TAATCTCCGTCATG-ATAACAGTATTTCTACCTT--GTGTATTTGTGAGCAGGATCCAAT 881
                      * ** *   *  ** * ** *  *   *** ***   *   **  *        *   * 

consensus_4486#0      ATCAATTAGTCATGTCAACATATGGGCACTAAATCTAGTCATGCCAAGACATGGAAACTA 959
consensus_4486#1      TTCCCTGTCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACAT 941
                       **  *   * * **  *   ****       ****  *   *  ***  *     **  

consensus_4486#0      AGTTATTCTCAGGTCATTAAACTCTATGGCACTTCTTAACAAAAGCTCGAATCATTCAGC 1019
consensus_4486#1      GGATATT-TATCGTTGTAAAGGGATTTTACATGTCC-----ATAACTCGGATCAAGTT-C 994
                       * **** *   **  * **    * *  **  **      * * **** ****     *

consensus_4486#0      ACGAAAAATCAGTGTTGGTGAGACGTTTTTTCAGCATCTGCTTGCTCATGCTAACTAGCA 1079
consensus_4486#1      ATACATTACAGGCAGTGA-GGGAAGTTTATGAAGT-TCTGCCAGCTCGAGAATGGTC-CA 1051
                      *   *  *   *   **  * ** **** *  **  *****  ****  *     *  **

consensus_4486#0      ATACAGAAATTTGCTTACTTGCTTTTGGTACTTATTTTGTAGTTATTGCTTTTGCTGGCG 1139
consensus_4486#1      AGACAGAATCTCGCACAAACAA----GATAGTTGTCATA-GGTCGCAACTT-------GG 1099
                      * ******  * **  *         * ** ** *  *   **     ***        *

consensus_4486#0      ATGGCACCTTGTGCTCAACAAAATCTGAACACCTTATTCAGGGATTTGATTCTGACATGT 1199
consensus_4486#1      ATATCA----ATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACT-GATATCGAAGGGT 1154
                      **  **     *   *  *** **      *     * ** * * * ***   **   **

consensus_4486#0      TTTTAATTTATTTTCCATAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAAT 1259
consensus_4486#1      TT---GTTCATCCT-------GTACCCTGCACCTCCATGCAATCAAGTACTGCAAGGAGT 1204
                      **    ** **  *        * *   *** ** ** * * *   * * * **   * *

consensus_4486#0      CAGTACCACCTAATCTCCGTCATGATA-ACAGTATTTCTACCTTGTGTATTTGTGAGCAG 1318
consensus_4486#1      TTCTATGGC----TCCCCGAAGTAATGTGCTTTATGTTTGTCT-GTATATCTTCAAAGGT 1259
                         **   *    ** ***   * **   *  *** * *  ** ** *** *   *    

consensus_4486#0      GATCCAATTTCCCTGTCTAAGGTACTCTTCCATTAGAGTTTTTTTTAACTGCAGTTAACA 1378
consensus_4486#1      GA--------CAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTA 1311
                      **        *  **   *  *     *  ** *  **** *    *** *  *  *  *

consensus_4486#0      TTTAGAAAACATTTCCCTTGGACAACTTTGAAAGGGTATTTATTCATT-AATCTTAAAAA 1437
consensus_4486#1      TCCG------ACGCGCCATGTTCAACTTTGGAAGAGGAAC-ATGCATCCAGTTACAAGAT 1364
                      *         *    ** **  ******** *** * *   ** ***  * *   ** * 

consensus_4486#0      CATAGATT-TTGGTTGACAACTACATCATTGGGATTTGGGATATTTAGTTTTTTTTTCTG 1496
consensus_4486#1      GATGAACTACTTGTAGAAGATTTTA--GTTAAGAGTAG---TATGCAAACTGATGATCGG 1419
                       **  * *  * ** **  * *  *   **  ** * *   ***  *   *  *  ** *

consensus_4486#0      TACTCACCCATTGTTCTGTTAGTACT--TTGAAGTACATGCTCTTATGTTTCACCTACTT 1554
consensus_4486#1      CAA-CATTTCTCGTTGTAT-GGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGA-TT 1476
                       *  **    * *** * *  * ***    ***    **  * ** *     *** * **

consensus_4486#0      TTCTAAAATATGTCTTCACATTCCATACTGCTTAGGTTGATTTGAAAAGTTACAATGAAC 1614
consensus_4486#1      GGCAACAATA-------ACATACTGGGAGTTGAAATCTGATCCTCAAAT----------- 1518
                        * * ****       **** *          *   ****    ***            

consensus_4486#0      AAGTGATTGCAAGCTCTACACTCACTTTTCCTGGTTGATGCTACAGCAACAACTGGAAAC 1674
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      ATTATTTGATTAATATTGCCCCTTGAAGTCTTCATGTTGAGATAGATGTGTTATATGTCA 1734
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      TGATTTCAAAGATGATCATTTATTGGGATCTGTGAAGGATGCTCCATATTCTGCTCTACT 1794
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      ATAGAGAAGAGTAGAAGTCTGTTTAATATTCAAGCACATACACTGCATTTCCTAGGTTTC 1854
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      TCCGTTCATGACCAATGAACACCGATATACAATTGTGAGATATATGCATTTTTGTTTGAT 1914
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      TTAATTTGTTCTGAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGA 1974
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      CATGGATATTTATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATAC 2034
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      ATTACAGGTTGTTGCATCATAAAAAGTATTCTCAAGAATCATACATTATGAGTTTTCAAA 2094
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      CAAATATTATCCCACCTGTTTGCTCTCATGCAGGCAGTGAGGGAAGTTTATGAAGTTCTG 2154
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      CCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACAAGATAGTTGTCATAGGTCGC 2214
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      AACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTTGCAAGCACTGATATCGAAGG 2274
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      GTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAATACTGCAAGGAGTTTCTATGG 2334
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      CTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTTCAAAGGTGACAGTGCTGACA 2394
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      GCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTATCCGACGCGCCATGTTCAACT 2454
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      TTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACTACTTGTAGAAGATTTTAGTT 2514
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      AAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGTTGTATGGAACTGACCGAAAG 2574
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      CAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATACTGGGAGTTGAAATCTGATCC 2634
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      TCAAATTCATGTTTGTAAGTTTGCCACTCTCTTGCAAAATGCAAAACGCAGCTACGTGCT 2694
consensus_4486#1      ------------------------------------------------------------
                                                                                  

consensus_4486#0      GC 2696
consensus_4486#1      --
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)