cluster # 4490

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Oryza sativa
cluster # 4490 cluster # 4490 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4490#0 length = 779 sequences # 3

consensusID : consensus_4490#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 779
fasta sequence

                              [TTTTTTTTTTTTTGGGCAGCAAAAACCATTTTTTTTTGGGC-AAAAAAAAAAAAGTTTATATACAGCAAAATTTACAAGGATCGATTCTGTTCCAATGTACAGAAATACACACACACACACGTACACACGCTGAAGAATTGTGCATTTGCAGTTTTTGCAGAGAATATTTACAGACTGCAATGCCCGGTACTAGCAGGAGCCGAGGTCCAATAATCCAAAAGCAAGTGGGACAAATTAACAATGGAATAGCAATTCATCTCTACATGTTATCATAGGTTAGCACATTATCAAGAAGGGAATAGGTTTCCTCTATGACGCGCGCGATTCGTGTTGATCAGCATTATGCCTTGCTTTGCAAAGGTACAATAGCCTTGAAACCTCAGGAAGGACATACCCACATTCAGCGCTGCTTCAAAATCCCACTGCTACTCTCTCTCTCTTTTTTGTTGCTGTTTTCTTTTTATACATCTTTTTTTGGGTTTCCATGTCTTCCTTCATCGATATAGTTCTGCGTCTTCAAAAAACGTAGTAGAACAAAACGGGACAATACTAATATTATACAGCGTAGCTAGGAGATCTGAGTTCTGACGAGAAGAAAACCACGGTTACACAAAATTCCTCCCATCTGCAAAAACAGCACAAGAGTTTAGAGTATTAGAATACACAAAGAAACTGTGATGATGAAAAAAAGAACACTCAACACTGTGCAAAACAAGACTTCCACACAATCAAATTCTCTGGTCCATTGATTCCTCATGGGACAATGTTCAGGTATGTGC]

[-] EMBL C99592               [TTTTTTTTTTTTTGGGCAGCAAAAACCAGTTCCACTTGGGCAAAAAAAAAAAAAGTTTATATACAGCAAAATTTACAAGGNTCGNTTCTGTTCCAATGTACAGAAATACACACACACACACGTACACACGNTGAAGANTTGTGCATTTGCAGTTTTTGCAGAGANTATTTACAGACTGCAATGCCCGGTACTAGCAGGAGCCGAGGTCCAATAATCCAAAAGCAAGTGGGACAANTTAACAATGGAATAGCAATTCATCTCTACATGTTATCATAGGTTAGCACATTATCAAGAAGGGATTAGGTTTCCTCTATGACGGGCGCGATTCGTGTTGATCAGCATTATGCCTTGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB621656             [                           cTTTTTTTTTGGGC  AAAAAAAAAAAGTTTATATACAGAAAAATTTACAAGGATCGATTCTGTTCCAATGTACAGAAAT  ACACACACACACGTACACACGCTGAAGAATTGTGCATTTGCAGTTTTTGCAGAGAATATTTACAGACTGCAATGCCCGGTACTAGCAGGAGCCGAGGTCCAATAATCCAAAAGCAAGTGGGACAAATTAACAATGGAATAGCAATTCATCTCTACATGTTATCATAGGTTAGCACATTATCAAGAAGGGAATAGGTTTCCTCTATGACGCGCGCGATTCGTGTTGATCAGCATTATGCCTTGCTTTGCAAAGGTACAATAGCCTTGAAACCTCAGGAAGGACATACCCACATTCAGCGCTGCTTCAAAATCCCACTGCTACTCTCTCTCTCTTTTTTGTTGCTGTTTTCTTTTTATACATCTTTTTTTGGGTTTCCATGTCTTCCTTCATCGATATAGTTCTGCGTCTTCAAAAAACGTAGTAGAACAAAACGGGACAATACTAATATTATACAGCGTAGCTAGGAGATCTGAGTTCTGACGAGAAGAAAACCACGGTTACACAAAATTCCTCCCATCTGCAAAAACAGCACAAGAGTTTAGAGTATTAGAATACACAAAGAAACTGTGATGATGAAAAAAAGAACACTCAACACTGTGCAAAACAAGACTTCCACACAATCAAATTCTCTGGTCCATTGATTCCTCATGGGACAATGTTCAGGTATGTGC]
[+] EMBL CF304828             [                    gtttttttTTTTTTTTTGGGC AAAAAAAAAAAAGTTTATATACAGCAAAATTTACAAGGATCGATTCTGTTCCAATGTACAGAAATACACACACACACACGTACACACGCTGAAGAATTGTGCATTTGCAGTTTTTGCAGAGAATATTTACAGACTGCAATGCCCGGTACTAGCAGGAGCCGAGGTCCAATAATCCAAAAGCAAGTGGGACAAATTAACAATGGAATAGCAATTCATCTCTACATGTTATCATAGGTTAGCACATTATCAAGAAGGGAATAGGTTTCCTCTATGACGCGCGCGATTCGTGTTGATCAGCATTATGCCTTGCTTTGCAAAGGTACAATAGCCTTGAAACCTCAGGAAGGACATACCCACATTCAGCGCTGCTTCAAAATCCCACTGCTACTCTCTC                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_4490#0
TTTTTTTTTTTTTGGGCAGCAAAAACCATTTTTTTTTGGGCAAAAAAAAAAAAGTTTATA
TACAGCAAAATTTACAAGGATCGATTCTGTTCCAATGTACAGAAATACACACACACACAC
GTACACACGCTGAAGAATTGTGCATTTGCAGTTTTTGCAGAGAATATTTACAGACTGCAA
TGCCCGGTACTAGCAGGAGCCGAGGTCCAATAATCCAAAAGCAAGTGGGACAAATTAACA
ATGGAATAGCAATTCATCTCTACATGTTATCATAGGTTAGCACATTATCAAGAAGGGAAT
AGGTTTCCTCTATGACGCGCGCGATTCGTGTTGATCAGCATTATGCCTTGCTTTGCAAAG
GTACAATAGCCTTGAAACCTCAGGAAGGACATACCCACATTCAGCGCTGCTTCAAAATCC
CACTGCTACTCTCTCTCTCTTTTTTGTTGCTGTTTTCTTTTTATACATCTTTTTTTGGGT
TTCCATGTCTTCCTTCATCGATATAGTTCTGCGTCTTCAAAAAACGTAGTAGAACAAAAC
GGGACAATACTAATATTATACAGCGTAGCTAGGAGATCTGAGTTCTGACGAGAAGAAAAC
CACGGTTACACAAAATTCCTCCCATCTGCAAAAACAGCACAAGAGTTTAGAGTATTAGAA
TACACAAAGAAACTGTGATGATGAAAAAAAGAACACTCAACACTGTGCAAAACAAGACTT
CCACACAATCAAATTCTCTGGTCCATTGATTCCTCATGGGACAATGTTCAGGTATGTGC

clustalw multiple alignements is not computed in this case