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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4496 cluster # 4496       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4496#0 length = 857 sequences # 3  

consensusID : consensus_4496#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 857
fasta sequence
                              [AACTCTCGGCAGCACATCTCCCCTCTTCTTCCTGAGTACTCTGGGCCAATCTGCCGCCCTCCGCCGCACGCGCCATCCGATGGAGGAGGCGCAGGCCGCCGTGATGGCGCACCTGGACCAGGTCTCGGGCCTCGTCCAGGCGCTCTCCGCCGAGCTCCGCCGCGGGATCGGCCCCGCCGCCGACGGCCTTCTCGCCTTCGTCCGCGCCGTCGACTGGACGGAACCATGGCTGATTTGATTGATGGTATTCCATGCGACTCTGTTGCTCACGGCCGTCGGGTTGAGGAGGAATGCCAATTTCCAGCTCTTCATGCTGTTTCTTGCCTATTCAGGAGTTTATCTTGCTGAAAAGATAAATAGCTATATGGCAGAGCACTGGAAGAGCATTGCCACACGAAATTACTTCGACCGCGCT-GGAGTTTTTGTTTCTGTCGTCTGGTCGGGTCCCCTTATCTTCATATCTATGGTCATTGTGGTTAGCTCCCTTATTACATTATGTCGGTTGATGGCGAAATGGAAGAGAGCAGAACTAAGGCATCGGGCTCAGCTTGCTCGTGACAAACAGGATTGACTGAAAGGTTCCTTAGTCTGGTAGAAGAAATGATTAGAGACATGCGTCTTCTAGAATTGTAACTGTTGGTGTTTAATCACCTGATGTTTTTCAGTTGCTTGCTGCTAGTAACTTACTGCGTCGGTTATATTCTGGTGTTCATGAACTCTAGTAACAGCTAAAAACAGAAATACTAGACCCAGTATCTGATTTCATCATGTTTTGGTTCAGTAGCCACGAACATGGATGTGTAATTTTATTTAAAATCGATTGTGATAAATTGCAAACTGCATCCTTGTGCTAAAAA]

[+] EMBL AK072834             [AACTCTCGGCAGCACATCTCCCCTCTTCTTCCTGAGTACTCTGGGCCAATCTGCCGCCCTCCGCCGCACGCGCCATCCGATGGAGGAGGCGCAGGCCGCCGTGATGGCGCACCTGGACCAGGTCTCGGGCCTCGTCCAGGCGCTCTCCGCCGAGCTCCGCCGCGGGATCGGCCCCGCCGCCGACGGCCTTCTCGCCTTCGTCCGCGCCGTCGACTGGACGGAACCATGGCTGATTTGATTGATGGTATTCCATGCGACTCTGTTGCTCACGGCCGTCGGGTTGAGGAGGAATGCCAATTTCCAGCTCTTCATGCTGTTTCTTGCCTATTCAGGAGTTTATCTTGCTGAAAAGATAAATAGCTATATGGCAGAGCACTGGAAGAGCATTGCCACACGAAATTACTTCGACCGCGCT GGAGTTTTTGTTTCTGTCGTCTGGTCGGGTCCCCTTATCTTCATATCTATGGTCATTGTGGTTAGCTCCCTTATTACATTATGTCGGTTGATGGCGAAATGGAAGAGAGCAGAACTAAGGCATCGGGCTCAGCTTGCTCGTGACAAACAGGATTGACTGAAAGGTTCCTTAGTCTGGTAGAAGAAATGATTAGAGACATGCGTCTTCTAGAATTGTAACTGTTGGTGTTTAATCACCTGATGTTTTTCAGTTGCTTGCTGCTAGTAACTTACTGCGTCGGTTATATTCTGGTGTTCATGAACTCTAGTAACAGCTAAAAACAGAAATACTAGACCCAGTATCTGATTTCATCATGTTTTGGTTCAGTAGCCACGAACATGGATGTGTAATTTTATTTAAAATCGATTGT                                 ]
[+] EMBL C99043               [                          TCTTCCTGAGTACTCTGGGCCAATCTGCCGCCCTCCGCCGCACGCGCCATCCGATGGAGGAGGCGCAGGCCGCCGTGATGGCGCACCTGGACCAGGTCTCGGGCCTCGTCCAGGCGCTCTCCGCCGAGCTCCGCCGCGGGATCGGCCCCGCCGCCGACAGCCTTCTCGCCTTCGTCCGCGCCGTCGACTGGACGGAACCATGGCTGATTTGCTTGATGGTATTCCATGCGACTCTGTTGCTCACGGCCGTCGGGTTGAGGAGGAATGCCAATTTCCAGCTCTTCATGCTGTTTCTTGCCTATTCAGGAGTTTATCTTGCTGAAAAGATAAATAGCTATATGGCAGAGCACTGGAAGAGCATTGCCACACGAAATTACTTCGACCGCGCTGGGAGTTTTTGTTTCTGTCGTCTGGTCGGGTCCCCTTATCTTCATATCTATGG                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C99044               [                                                                                                                                                                                                                                                                                                                                                                                                                                 GAGTTTTTGTTTCTGTCGTCTGGTCGGGTCCCCTTATCTTCATATCTATGGTCATTGTGGTTAGCTCCCTTATTACATTATGTCGGTTGATGGTGAAATGGAAGAGAGCAGAACTAAGGCATCGGGCTCAGCTTGCTCGTGACAAACAGGATTGACTGAAAGGTTCCTTAGTCTGGTAGAAGAAATGATTAGAGACATGCGTCTTCTAGAATTGTAACTGTTGGTGTTTAATCACCTGATGTTTTTCAGTTGCTTGCTGCTAGTAACTTACTGCGTCGGTTATATTCTGGTGTTCATGAACTCTAGTAACAGCTAAAAACAGAAATACTAGACCCAGTATCTGATTTCATCATGTTTTGGTTCAGTAGCCACGAACATGGATGTGTAATTTTATTTAAAATCGATTGTGATAAATTGCAAACTGCATCCTTGTGCTAAAAA]


>consensus_4496#0 AACTCTCGGCAGCACATCTCCCCTCTTCTTCCTGAGTACTCTGGGCCAATCTGCCGCCCT CCGCCGCACGCGCCATCCGATGGAGGAGGCGCAGGCCGCCGTGATGGCGCACCTGGACCA GGTCTCGGGCCTCGTCCAGGCGCTCTCCGCCGAGCTCCGCCGCGGGATCGGCCCCGCCGC CGACGGCCTTCTCGCCTTCGTCCGCGCCGTCGACTGGACGGAACCATGGCTGATTTGATT GATGGTATTCCATGCGACTCTGTTGCTCACGGCCGTCGGGTTGAGGAGGAATGCCAATTT CCAGCTCTTCATGCTGTTTCTTGCCTATTCAGGAGTTTATCTTGCTGAAAAGATAAATAG CTATATGGCAGAGCACTGGAAGAGCATTGCCACACGAAATTACTTCGACCGCGCTGGAGT TTTTGTTTCTGTCGTCTGGTCGGGTCCCCTTATCTTCATATCTATGGTCATTGTGGTTAG CTCCCTTATTACATTATGTCGGTTGATGGCGAAATGGAAGAGAGCAGAACTAAGGCATCG GGCTCAGCTTGCTCGTGACAAACAGGATTGACTGAAAGGTTCCTTAGTCTGGTAGAAGAA ATGATTAGAGACATGCGTCTTCTAGAATTGTAACTGTTGGTGTTTAATCACCTGATGTTT TTCAGTTGCTTGCTGCTAGTAACTTACTGCGTCGGTTATATTCTGGTGTTCATGAACTCT AGTAACAGCTAAAAACAGAAATACTAGACCCAGTATCTGATTTCATCATGTTTTGGTTCA GTAGCCACGAACATGGATGTGTAATTTTATTTAAAATCGATTGTGATAAATTGCAAACTG CATCCTTGTGCTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)