cluster # 4508

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Oryza sativa
cluster # 4508 cluster # 4508 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4508#0 length = 586 sequences # 3

consensusID : consensus_4508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 586
fasta sequence

                              [GGAGGNGCCGCCGCCGCAGGCGGCCTTGCAGATGCAGCAGCCCGGCGGCGGCGCCGATGCTGGTGGCATGGNTGGCGCGTTCCCGCCGGACCCGTCTGCCGCCGGCCTCCCGTTCTTCAACCTGCCGCTCAACAACATGCCCGGTGGCGGCGGCTCACAGCTCCCTCCCGGCGCCGACGGCCATGGCTGGGCCGGCGCACGGCACCGTTCTGACATGCGCATACATGGGTGTAGCTCCGGCGAAAGGAGAGGAGATGAGAGGAGAGATCACAAGAAGC-AAAGGAAAGGACATCGCAAGGNTTCATGGCCGCAGCTTGCAAAAGGTTAGCGAACGCACGCATGAACCACGTA-TTCAGGGTTACCACCGATCGATCTATATCTACTGCTCTATTTCTATCTCTATG-TACAATTATTTCGTAGTGTTTGCTCGATCTCTGATTATGTGTTTTCGTTATTGTTCTTTTTTTCCCCTTTTTCTTTTATTGTTTCTTTTGAACCTTAATTTGTGGTGTAACCTTTNTTAATTGTCAATCTGGCTTTAATAATTAAGTAGCCTTTAAAAAATTCGAGGAAAAAAAAAAAAAAA]

[+] EMBL OSR00901A            [GGAGGNGCCGCCGCCGCAGGCGGCCTTGCAGATGCAGCAGCCCGGCGGCGGCGCCGATGCTGGTGGCATGGNTGGCGCGTTCCCGCCGGACCCGTCTGCCGCCGGCCTCCCGTTCTTCAACCTGCCGCTCAACAACATGCCCGGTGGCGGCGGCTCACAGCTCCCTCCCGGCGCCGACGGCCATGGCTGGGCCGGCGCACGGCACCGTTCTGACATGCGCATACATGGGTGTAGCTCCGGCGAAAGGAGAGGAGATGAGAGGAGAGATCACAAGAAGC AAAGGAAAGGACATCGCAAGGNTTCATGGCCGCAGCTTGCAAAAGGTTAGCGAACGCACGCATGAACCACGTA TTCAGGGTTACCACCGATCGATCTATATCTACTGCTCTATTTCTATCTCTATG TACAATTATTTCGTAGTGTTTGCTCGATCTCTGATTATGTGTTT                                                                                                                                          ]
[+] EMBL AU184181             [                                                                                                                                                                                                                                                                          nTCTCAAGAAGCAAAAGGAAAGGACATCGCAAGGGTTCATGGCCGCAGCTTGCAAAAGGTTAGCGAACGCACGCATGAACCACGTA TTCAGGGTTACCNCCGATCGATCTATATCTACTGCTCTATTTCTATCTCTATG TACAATTATTTCGTAGTGTTTGCTCGATCTCTGATTATGTGTTTTCGTTATTGTTCTTTTTTTCCCCTTTTTCTTTTATTGTTTCTTTTGAACCTTAATTTGTGGTGTAACCTTTNTTAATTGTCAATCTGGCTTTAATAATTAAGTAGCCTTTAAAAAA                      ]
[+] EMBL AU031639             [                                                                                                                                                                                                                                                                                                                                                  GCNTGAACCACGTATTTNAGGGTTACCACCGATCGANCTATATCTACTGCTCTATTTCTATCTCNATGTTACAATTATTTCGTAGTGTTTGCTCGATCTCTGATTATGTGTTTTCGTTATTGTTCTTTTTTTCCCCTTTTTCTTTTATTGTTTCTTTTGAACCTTAATTTGTGGTGTAACCTTTCTTAATTGTCAATCTGGCTTTAATAATTAAGTAGCCTTTAAATTGTTCGAGGAAAAAAAAAAAAAAA]




>consensus_4508#0
GGAGGNGCCGCCGCCGCAGGCGGCCTTGCAGATGCAGCAGCCCGGCGGCGGCGCCGATGC
TGGTGGCATGGNTGGCGCGTTCCCGCCGGACCCGTCTGCCGCCGGCCTCCCGTTCTTCAA
CCTGCCGCTCAACAACATGCCCGGTGGCGGCGGCTCACAGCTCCCTCCCGGCGCCGACGG
CCATGGCTGGGCCGGCGCACGGCACCGTTCTGACATGCGCATACATGGGTGTAGCTCCGG
CGAAAGGAGAGGAGATGAGAGGAGAGATCACAAGAAGCAAAGGAAAGGACATCGCAAGGN
TTCATGGCCGCAGCTTGCAAAAGGTTAGCGAACGCACGCATGAACCACGTATTCAGGGTT
ACCACCGATCGATCTATATCTACTGCTCTATTTCTATCTCTATGTACAATTATTTCGTAG
TGTTTGCTCGATCTCTGATTATGTGTTTTCGTTATTGTTCTTTTTTTCCCCTTTTTCTTT
TATTGTTTCTTTTGAACCTTAATTTGTGGTGTAACCTTTNTTAATTGTCAATCTGGCTTT
AATAATTAAGTAGCCTTTAAAAAATTCGAGGAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case