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Oryza sativa
cluster # 4518 cluster # 4518       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4518#0 length = 3171 sequences # 3  

consensusID : consensus_4518#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3171
fasta sequence
                              [CGGGAGCTTGTTCACACGCCTCCTCCCCTACGACGCCGGCGATGGGTAAGCGGAAGCAGCGCGGCGGCGGCGGCGGTGGCGGGGGAGCAGCCACGGAAGGCGGCGCGGCCACCGGCGGCGGCGCCGGAGGCCACAGCCCCTCCACCGTGTTCGTCTCCAACCTGCCGTACACCTTCAAGTCCTCCGATCTCGAGGCGGTGTTCAGCGAGGTCGGGCCGGTGAGGCGATGCTTCATGGTCGCGCCGAAAGGGTCAGAGACGAGCAGAGGCTTTGGGTTCGTGCAATTTGCAACTGTTCAAGATGCTGAGCGATCTATTCAGCAAAAGGATGGATTCTCTGTTGCTGGTAGAAAAATTAGAGTTAAGCTAGCAACGCATCGTGCTCCACTGAAGGAACGTTTACAGAAGAAGGAGAATGCCGTGCAAGCCAAGGATGCCGATGCAACAAATGAAGCCAAGGATGCTGATGCAACAAATGAAGCCAAGGATGCCAATGCAACAAATGAAGCATATGCTACTTCTACTGCAAAACACAAGGAGACATCTCATAAAACAGATACAGAACCACTACAGTTGTTGAAAAAGGAAACTACACTATCAAAGGAAGTCAGCATTTCCAATACTGCTAAGGTGAAAAGCTCAGAAAAGCAAAGGGTTGCAAAAACTGTGATATTCGGTGGTCTTCGAGACTTTGCTATGGCGAGTGAAGTATTTCGTCTAGCTGGAGAGATTGGCACAGTTGTATCTGTTAGCTATCCACTTCCAAAAGAGGAAATGGAGCTCCATGGGCTTGAACGAGATGGATGCACAACAGATGCAGCAGCTGTACTTTTTGCCAGTGTCAAATCAGCTTGGGATTCGGTTGTTCACTTGCATCGTAAGGAGGTCAAGGGAGCAGTTGTTTGGGCTCGTCAGCTTGGTGGAGAGGGCTCAAAGATCAGGAAATGGAGAGTGATAGTCCGGAATCTACCATTTAAGATTACAGTAAAGGAGATCATGGATATATTCAGTTTAGCAGGATTTATATGGGATGTGTCCATTCCACAGAAGTCTGATGACGGGGCATCAAAAGGCTTTGCTTTTGTGTCTTTCACACGTAAACAAGATGCAGAAAATGCTATAAAAAATGTTAATGGAAAAGTAGTTGCAAAGAGAACTGTAGCTGTTGATTGGGCTGTTCCAAAGAAAGTATACACTGTTGCTGCAAAATCCAGCACTAAGGATGATGAGCTGGCAAATGTATCAGACAGAGGCAGTGACGAGGAGTCTGAAGATAATCTTGTTGGAGAAGATGATAGCTATGAACTTGAGCAGGAGACTTCCAATTGTCCTGCTGATGATTTCAAAACTGAAATGGATATTTCAAGAAAGGTTCTTGAAAATTTGATCAAGTCATCTGAGAGGGCTGAACCATCTGGCAATGAGGGTTCTGATATTGATACAGACACAGAAACAGAACAAGATACATCAGAAAAGAAACAGAAGCAGACCCATTTACCTACATCTGTACCTGCAGCTGACAAGTTAGAAAATTCTAAACGTGTGGCACAGGAGGAAAACACCCTTCCTGCCACAAAATTCAAGAAACAAGACGCTGGGCTGGATAGGACATTATTCATAAGCAACCTTCCTTTTGATCTAAGTAATGAGGAGGTAACAGAGCGCTTCTCAGCATTTGGGAAGGTTGAATCTTTCTTCCCAGTTCTTCACAAACTCACAAAGAGACCTAGAGGAACTGGTTTTCTGAAGTTCTCTACACCAGAGGCAGCTGATGCAGCAGTTTCTGCTGCCAATGCTGCTCCTGGATTGGGAATTTTTATAAAGAGCAGGGCTCTTAAGATAATGAAAGCACTGGACAAGGAGTCAGCTCACAAAAAGGAACTTGAGAAGGCAAAGAATGAGGTGGAGGATCGACGTAACCTATACTTGACTAAGGAAGGTGAAATACTTGCTGGGACGCCAGCTGCAGAAGGCGTATCCGATGCTGACATGAATAAACGTAGTTGGTTAGCTAGAAGAAAAGCGGAAATGCTCCAGTCTCCAAAATTTCATGTGTCCAAAACAAGGCTTATCATCTACAACCTGCCAAAGACTATGACCATTAATGATGTAAAGAAGCTTTGTAGAGAAGCAGTTATTTCTCGTGCTCACAAGCAAAATCCCGTCATCCGAAAGGTAAATATTCTGAAAAATGAAAAGAAGAGCAGCAGTACTGCACAGAAACATTCCCGTGGTGTAGCCTTCGTAGATTTTCAAGAACATGAGCATGCTCTTGTGGCTCTAAGAGTCCTAAACAATAACCCTGAAACTTTTGGTGCAGAACGTCGTCCAATTGTGGAGTTTGCACTTGAGAACGTTGAGAAAGTGAGACTCCAGAAAATTTGGAAGGACCGCCGTGATAAGTTGCGAGAAGCTGCGCAAGATAAGGCGAGGCCTCTGGGAGATCAGTCTGCAACTGATGGCCCTGATGCAAATAACAGAAGGGCTTTCAACAAAGGGAACAAGAGAAAATCACACGATAGATCATCTAAGTTACCCTACGCTGGTGAAGGGCCTGCAGAGGATCTTTCGGCAGCT-GGAGATGGTGGCACTGTGGAAAGTATGGTTGAAGATAAAAGAAAGGATCAAAGGCCTGCAAAAAGAGCACGAAAGTCAAACAAGGGAACCACCGCGTTGGATGGAGATAGACAAGATGCAACACCAACCGCTGATAGGAATCGAACTCTGTCGAGTAAACATAATCCGGCAGATGCCCTGGCAAAGAGGAAAAACAGAAATGATAGTCATTCGGAGCAAAAGAGAGGAAGGGCTCAAAGAAAGACCAAGAAAGAGCTGGCTGGGGAAGGAAGCGTGGATAAATCGCTGGTGGAGCAATATCGTTCCAAATTTTTGCAACATGGTCTGAACAAAACCAAAGGATAATTGAGTGTGATCATCGTGGGGAGAACAACATGGTGACCCGGACCAGCTTGTCAAAAGGCTAAAATGTTTCCAGAGAACTTTCCACAAACTTTGCAGCCCCACCATTGGTCTGCCAAAATTTTGCTTGCTACATTTTGGTTGTTTTGTCCCACTCTTGTCGATCTTGACCCTTGATGACAGTGGCTGATGGTCGTTGGAGCCATCTATTATGACCATTTGAATGGGAATGCTTATGTCTACAGAAAAAAAA]

[+] EMBL AK067130             [CGGGAGCTTGTTCACACGCCTCCTCCCCTACGACGCCGGCGATGGGTAAGCGGAAGCAGCGCGGCGGCGGCGGCGGTGGCGGGGGAGCAGCCACGGAAGGCGGCGCGGCCACCGGCGGCGGCGCCGGAGGCCACAGCCCCTCCACCGTGTTCGTCTCCAACCTGCCGTACACCTTCAAGTCCTCCGATCTCGAGGCGGTGTTCAGCGAGGTCGGGCCGGTGAGGCGATGCTTCATGGTCGCGCCGAAAGGGTCAGAGACGAGCAGAGGCTTTGGGTTCGTGCAATTTGCAACTGTTCAAGATGCTGAGCGATCTATTCAGCAAAAGGATGGATTCTCTGTTGCTGGTAGAAAAATTAGAGTTAAGCTAGCAACGCATCGTGCTCCACTGAAGGAACGTTTACAGAAGAAGGAGAATGCCGTGCAAGCCAAGGATGCCGATGCAACAAATGAAGCCAAGGATGCTGATGCAACAAATGAAGCCAAGGATGCCAATGCAACAAATGAAGCATATGCTACTTCTACTGCAAAACACAAGGAGACATCTCATAAAACAGATACAGAACCACTACAGTTGTTGAAAAAGGAAACTACACTATCAAAGGAAGTCAGCATTTCCAATACTGCTAAGGTGAAAAGCTCAGAAAAGCAAAGGGTTGCAAAAACTGTGATATTCGGTGGTCTTCGAGACTTTGCTATGGCGAGTGAAGTATTTCGTCTAGCTGGAGAGATTGGCACAGTTGTATCTGTTAGCTATCCACTTCCAAAAGAGGAAATGGAGCTCCATGGGCTTGAACGAGATGGATGCACAACAGATGCAGCAGCTGTACTTTTTGCCAGTGTCAAATCAGCTTGGGATTCGGTTGTTCACTTGCATCGTAAGGAGGTCAAGGGAGCAGTTGTTTGGGCTCGTCAGCTTGGTGGAGAGGGCTCAAAGATCAGGAAATGGAGAGTGATAGTCCGGAATCTACCATTTAAGATTACAGTAAAGGAGATCATGGATATATTCAGTTTAGCAGGATTTATATGGGATGTGTCCATTCCACAGAAGTCTGATGACGGGGCATCAAAAGGCTTTGCTTTTGTGTCTTTCACACGTAAACAAGATGCAGAAAATGCTATAAAAAATGTTAATGGAAAAGTAGTTGCAAAGAGAACTGTAGCTGTTGATTGGGCTGTTCCAAAGAAAGTATACACTGTTGCTGCAAAATCCAGCACTAAGGATGATGAGCTGGCAAATGTATCAGACAGAGGCAGTGACGAGGAGTCTGAAGATAATCTTGTTGGAGAAGATGATAGCTATGAACTTGAGCAGGAGACTTCCAATTGTCCTGCTGATGATTTCAAAACTGAAATGGATATTTCAAGAAAGGTTCTTGAAAATTTGATCAAGTCATCTGAGAGGGCTGAACCATCTGGCAATGAGGGTTCTGATATTGATACAGACACAGAAACAGAACAAGATACATCAGAAAAGAAACAGAAGCAGACCCATTTACCTACATCTGTACCTGCAGCTGACAAGTTAGAAAATTCTAAACGTGTGGCACAGGAGGAAAACACCCTTCCTGCCACAAAATTCAAGAAACAAGACGCTGGGCTGGATAGGACATTATTCATAAGCAACCTTCCTTTTGATCTAAGTAATGAGGAGGTAACAGAGCGCTTCTCAGCATTTGGGAAGGTTGAATCTTTCTTCCCAGTTCTTCACAAACTCACAAAGAGACCTAGAGGAACTGGTTTTCTGAAGTTCTCTACACCAGAGGCAGCTGATGCAGCAGTTTCTGCTGCCAATGCTGCTCCTGGATTGGGAATTTTTATAAAGAGCAGGGCTCTTAAGATAATGAAAGCACTGGACAAGGAGTCAGCTCACAAAAAGGAACTTGAGAAGGCAAAGAATGAGGTGGAGGATCGACGTAACCTATACTTGACTAAGGAAGGTGAAATACTTGCTGGGACGCCAGCTGCAGAAGGCGTATCCGATGCTGACATGAATAAACGTAGTTGGTTAGCTAGAAGAAAAGCGGAAATGCTCCAGTCTCCAAAATTTCATGTGTCCAAAACAAGGCTTATCATCTACAACCTGCCAAAGACTATGACCATTAATGATGTAAAGAAGCTTTGTAGAGAAGCAGTTATTTCTCGTGCTCACAAGCAAAATCCCGTCATCCGAAAGGTAAATATTCTGAAAAATGAAAAGAAGAGCAGCAGTACTGCACAGAAACATTCCCGTGGTGTAGCCTTCGTAGATTTTCAAGAACATGAGCATGCTCTTGTGGCTCTAAGAGTCCTAAACAATAACCCTGAAACTTTTGGTGCAGAACGTCGTCCAATTGTGGAGTTTGCACTTGAGAACGTTGAGAAAGTGAGACTCCAGAAAATTTGGAAGGACCGCCGTGATAAGTTGCGAGAAGCTGCGCAAGATAAGGCGAGGCCTCTGGGAGATCAGTCTGCAACTGATGGCCCTGATGCAAATAACAGAAGGGCTTTCAACAAAGGGAACAAGAGAAAATCACACGATAGATCATCTAAGTTACCCTACGCTGGTGAAGGGCCTGCAGAGGATCTTTCGGCAGCT GGAGATGGTGGCACTGTGGAAAGTATGGTTGAAGATAAAAGAAAGGATCAAAGGCCTGCAAAAAGAGCACGAAAGTCAAACAAGGGAACCACCGCGTTGGATGGAGATAGACAAGATGCAACACCAACCGCTGATAGGAATCGAACTCTGTCGAGTAAACATAATCCGGCAGATGCCCTGGCAAAGAGGAAAAACAGAAATGATAGTCATTCGGAGCAAAAGAGAGGAAGGGCTCAAAGAAAGACCAAGAAAGAGCTGGCTGGGGAAGGAAGCGTGGATAAATCGCTGGTGGAGCAATATCGTTCCAAATTTTTGCAACATGGTCTGAACAAAACCAAAGGATAATTGAGTGTGATCATCGTGGGGAGAACAACATGGTGACCCGGACCAGCTTGTCAAAAGGCTAAAATGTTTCCAGAGAACTTTCCACAAACTTTGCAGCCCCACCATTGGTCTGCCAAAATTTTGCTTGCTACATTTTGGTTGTTTTGTCCCACTCTTGTCGATCTTGACCCTTGATGACAGTGGCTGATGGTCGTTGGAGCCATCTATTATGACCATTTGAATGGGAAT                      ]
[+] EMBL OS0393A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAAGAAGAGCAGCAGTACTGCACAGAAACATTCCCGTGGTGTAGCCTTCGTAGATTTTCAAGAACATGAGCATGCTCTTGTGGCTCTAAGAGTCCTAAACAATAACCCTGAAACTTTTGGTGCAGAACGTCGTCCAATTGTGGAGTTTGCACTTGAGAACGTTGAGAAAGTGAGACTCCAGAAAATTTGGAAGGACCGCCGTGATAAGTTGCGAGAAGCTGCGCAAGATAAGGCGAGGCCTCTGGGAGATCAGTCTGCAACTGATGGCCCTGATGCAAATAACAGAAGGGCTTTCAACAAAGGGAACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C98026               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACGATAGATCATCTAAGTTACCCTACGCTGGTGAAGGNCCTGCAGA GATCTTTCGGCAGCTGGGAGATGTTGGCACTGTGGAAAGTATGGTTGAAGATAAAAGAAAGGATCAAAGGCCTGCAAAAAGAGCACGAAAGTCAAACAAGGGAACCACCGCGTTGGATGGAGATAGACAAGATGCAACACCAACCGCTGATAGGAATCGAACTCTGTCGAGTAAACATAATCCGGCAGATGCCCTGGCAAAGAGGAAAAACAGAAATGATAGTCATTCGGAGCAAAAGAGAGGAAGGGCTCAAAGAAAGACCAAGAAAGAGCTGGCTGGGGAAGGAAGCGTGGATAAATCGCTGGTGGAGCAATATCGTTCCAAATTTTTGCAACATGGTCTGAACAAAACCAAAGGATAATTGAGTGTGATCATCGTGGGGAGAACAACATGGTGACCCGGACCAGCTTGTCAAAAGGCTAAAATGTTTCCAGAGAACTTTCCACAAACTTTGCAGCCCCACCATTGGTCTGCCAAAATTTTGCTTGCTACATTTTGGTTGTTTTGTCCCACTCTTGTCGATCTTGACCCTTGATGACAGTGGCTGATGGTCGTTGGAGCCATCTATTATGACCATTTGAATGGGAATGCTTATGTCTACAGAAAAAAAA]


>consensus_4518#0 CGGGAGCTTGTTCACACGCCTCCTCCCCTACGACGCCGGCGATGGGTAAGCGGAAGCAGC GCGGCGGCGGCGGCGGTGGCGGGGGAGCAGCCACGGAAGGCGGCGCGGCCACCGGCGGCG GCGCCGGAGGCCACAGCCCCTCCACCGTGTTCGTCTCCAACCTGCCGTACACCTTCAAGT CCTCCGATCTCGAGGCGGTGTTCAGCGAGGTCGGGCCGGTGAGGCGATGCTTCATGGTCG CGCCGAAAGGGTCAGAGACGAGCAGAGGCTTTGGGTTCGTGCAATTTGCAACTGTTCAAG ATGCTGAGCGATCTATTCAGCAAAAGGATGGATTCTCTGTTGCTGGTAGAAAAATTAGAG TTAAGCTAGCAACGCATCGTGCTCCACTGAAGGAACGTTTACAGAAGAAGGAGAATGCCG TGCAAGCCAAGGATGCCGATGCAACAAATGAAGCCAAGGATGCTGATGCAACAAATGAAG CCAAGGATGCCAATGCAACAAATGAAGCATATGCTACTTCTACTGCAAAACACAAGGAGA CATCTCATAAAACAGATACAGAACCACTACAGTTGTTGAAAAAGGAAACTACACTATCAA AGGAAGTCAGCATTTCCAATACTGCTAAGGTGAAAAGCTCAGAAAAGCAAAGGGTTGCAA AAACTGTGATATTCGGTGGTCTTCGAGACTTTGCTATGGCGAGTGAAGTATTTCGTCTAG CTGGAGAGATTGGCACAGTTGTATCTGTTAGCTATCCACTTCCAAAAGAGGAAATGGAGC TCCATGGGCTTGAACGAGATGGATGCACAACAGATGCAGCAGCTGTACTTTTTGCCAGTG TCAAATCAGCTTGGGATTCGGTTGTTCACTTGCATCGTAAGGAGGTCAAGGGAGCAGTTG TTTGGGCTCGTCAGCTTGGTGGAGAGGGCTCAAAGATCAGGAAATGGAGAGTGATAGTCC GGAATCTACCATTTAAGATTACAGTAAAGGAGATCATGGATATATTCAGTTTAGCAGGAT TTATATGGGATGTGTCCATTCCACAGAAGTCTGATGACGGGGCATCAAAAGGCTTTGCTT TTGTGTCTTTCACACGTAAACAAGATGCAGAAAATGCTATAAAAAATGTTAATGGAAAAG TAGTTGCAAAGAGAACTGTAGCTGTTGATTGGGCTGTTCCAAAGAAAGTATACACTGTTG CTGCAAAATCCAGCACTAAGGATGATGAGCTGGCAAATGTATCAGACAGAGGCAGTGACG AGGAGTCTGAAGATAATCTTGTTGGAGAAGATGATAGCTATGAACTTGAGCAGGAGACTT CCAATTGTCCTGCTGATGATTTCAAAACTGAAATGGATATTTCAAGAAAGGTTCTTGAAA ATTTGATCAAGTCATCTGAGAGGGCTGAACCATCTGGCAATGAGGGTTCTGATATTGATA CAGACACAGAAACAGAACAAGATACATCAGAAAAGAAACAGAAGCAGACCCATTTACCTA CATCTGTACCTGCAGCTGACAAGTTAGAAAATTCTAAACGTGTGGCACAGGAGGAAAACA CCCTTCCTGCCACAAAATTCAAGAAACAAGACGCTGGGCTGGATAGGACATTATTCATAA GCAACCTTCCTTTTGATCTAAGTAATGAGGAGGTAACAGAGCGCTTCTCAGCATTTGGGA AGGTTGAATCTTTCTTCCCAGTTCTTCACAAACTCACAAAGAGACCTAGAGGAACTGGTT TTCTGAAGTTCTCTACACCAGAGGCAGCTGATGCAGCAGTTTCTGCTGCCAATGCTGCTC CTGGATTGGGAATTTTTATAAAGAGCAGGGCTCTTAAGATAATGAAAGCACTGGACAAGG AGTCAGCTCACAAAAAGGAACTTGAGAAGGCAAAGAATGAGGTGGAGGATCGACGTAACC TATACTTGACTAAGGAAGGTGAAATACTTGCTGGGACGCCAGCTGCAGAAGGCGTATCCG ATGCTGACATGAATAAACGTAGTTGGTTAGCTAGAAGAAAAGCGGAAATGCTCCAGTCTC CAAAATTTCATGTGTCCAAAACAAGGCTTATCATCTACAACCTGCCAAAGACTATGACCA TTAATGATGTAAAGAAGCTTTGTAGAGAAGCAGTTATTTCTCGTGCTCACAAGCAAAATC CCGTCATCCGAAAGGTAAATATTCTGAAAAATGAAAAGAAGAGCAGCAGTACTGCACAGA AACATTCCCGTGGTGTAGCCTTCGTAGATTTTCAAGAACATGAGCATGCTCTTGTGGCTC TAAGAGTCCTAAACAATAACCCTGAAACTTTTGGTGCAGAACGTCGTCCAATTGTGGAGT TTGCACTTGAGAACGTTGAGAAAGTGAGACTCCAGAAAATTTGGAAGGACCGCCGTGATA AGTTGCGAGAAGCTGCGCAAGATAAGGCGAGGCCTCTGGGAGATCAGTCTGCAACTGATG GCCCTGATGCAAATAACAGAAGGGCTTTCAACAAAGGGAACAAGAGAAAATCACACGATA GATCATCTAAGTTACCCTACGCTGGTGAAGGGCCTGCAGAGGATCTTTCGGCAGCTGGAG ATGGTGGCACTGTGGAAAGTATGGTTGAAGATAAAAGAAAGGATCAAAGGCCTGCAAAAA GAGCACGAAAGTCAAACAAGGGAACCACCGCGTTGGATGGAGATAGACAAGATGCAACAC CAACCGCTGATAGGAATCGAACTCTGTCGAGTAAACATAATCCGGCAGATGCCCTGGCAA AGAGGAAAAACAGAAATGATAGTCATTCGGAGCAAAAGAGAGGAAGGGCTCAAAGAAAGA CCAAGAAAGAGCTGGCTGGGGAAGGAAGCGTGGATAAATCGCTGGTGGAGCAATATCGTT CCAAATTTTTGCAACATGGTCTGAACAAAACCAAAGGATAATTGAGTGTGATCATCGTGG GGAGAACAACATGGTGACCCGGACCAGCTTGTCAAAAGGCTAAAATGTTTCCAGAGAACT TTCCACAAACTTTGCAGCCCCACCATTGGTCTGCCAAAATTTTGCTTGCTACATTTTGGT TGTTTTGTCCCACTCTTGTCGATCTTGACCCTTGATGACAGTGGCTGATGGTCGTTGGAG CCATCTATTATGACCATTTGAATGGGAATGCTTATGTCTACAGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)