These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4531#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 4675 fasta sequence [TCTCAAATCGAAATCCCGCTCTCTCTCTCTCTCTCTCTCTCCCCCCCCATTCCTCCGCCTCAAATCGCAAACCCTAGCCGTCGCCGTCGACGAGAGGTCGACGAGAAGTCGACGAGAAGAGGAGGAGGAGAAGCTGCTGCTGGTGGTGGTGGTGCTCCGCCATGAACAACTTCCACGTCTACGAGGCCATCGGCCGCGGCAAGCACTCGACGGTGTACAAGGGGCGGAAGAAGAAGAGCATCGAGTACTTCGCCGTCAAGAGCGTCGACAAGTCGCAGCGGTCCAAGGTCCTCAATGAGGTCCGAATGCTTCATTCCTTAGATCATCCGAATGTTCTGAAATTTTACTCATGGTACGAAACCTCAGCTCATTTTTGGTTAATACTGGAGTACTGCGTTGGTGGAGACCTAAAGGGCTTGCTTGAGCAGGATAAGAAGCTGCCTGAAAATTCTATACATGACTTGGCTTATGATCTTGTGAAAGCTCTTCAGTTCTTGCATTCACAAGGAATTATATATTGTGATCTGAAACCATCAAATGTTTTACTTGATGAATCTGGGTGCATGAAGCTGTGCGATTTTGGATTAGCAAGGCGTTTGAAAGACATAGAGAAGACCAATCCTGGAGATGTGCCGCAACCTTTGAAGGGGACTCCATGTTATATGGCTCCTGAGTTGTTCCAAGAGGGAGGAGTGCATTCATATGCTTCAGATTTCTGGGCACTTGTTTGTGTATTGTATGAATGCTATTCAGGAAGGCCCCCTTTTGTGGCTAATGAATTTACCCAGCTAGTCAAATCTATAATTTCAGATCCTACACCACCTTTGCCTGATAACCCCTCAAGATCCTTTCAAAATCTGATCAATTGCTTACTCATGAAAGATCCTGCTGAAAGATTACAGTGGTCTGAACTATGCGAGCATCACTTTTGGAGGAGCAGAATGTCAATTATTCCTTTACCTCCTCAGCCTGCCTTTGACAACATGGTCGACCTTTCTGCTACACCATATTTAGTTGAGAGAAATGGTGATAAACCTTCTAGACAGTCCACACCACCCAAGCCCCGTGATGGCCTACGGAAGAAGGACGAAAATTCTGCTAAGGTGTTCACCCCTGTTAAGAATATGCTAAGTGGTAAGAAAAACAATGCAAAACCTTCCTGTAAGGCTGATGGATTGAAGGGTGTAAATATCCTCAGGATGTCTCGTGTAGCTAAGAGGAATTTGCAGAGAGAAAAAGACAAGGAGAACTACAGGCGACACCCTACAGAAGCTTCTGAGAATGATACAGAAGTTAAGATTGAAAACAATGATATGGAACTTGATTTTGGTGAAAATCCAGAAGGTGATGCACCTGATGACAATGATGGATCAGACAATCCTGGATCCGCAGAAGATGAAAAACTTTCCACTCAAGGCACTGATGGTAATGAAGAGAACTGCATGAGTAATCAGATGGATATGCTCACAGATGAAGGCCCAGTTAAGGCTGAAACCATGATAAAAACTGAACATAATTGTTCAGAAAATCTTGATGTGGTGGCCACTCCACCAAGTATTTGTATGAGGAAAGCACAACGAGCAAAGACAACTTCAGGTGCCGCAGCTGGTTCCGAGCCATCTGACATCTCTGCAGCATTCTGGCATCCAACAGATCTTGCTGTTAAACCAGTTATGCCTGGTAGGAAAGGAGATAAAGCTGTAGAGACAGTCCCTATGCTTCCGTTTGAAGCTCTTCCTGCTGTTGATTATATTAAGTTGCCACGGGAACAAATGAATGCATTCAATAGTCAGATACTTCAGAGTTTAAGTGGTACTTTTCAGGTTTCAGAGAAACAGAATATCATCAAATACCTGGAGATGTTAAGCATCAATTCTGATGCTGCAAATATAATCACAAATGGTCCAATTATGCTGTTGCTTATAAAAATGCTCCGTCTGTCAAAAACTTCAGTATTGCGTGTCCAAATTGCTTCACTTATGGGATTGTTGATACGCTACTCCACTATCCTTGATATAGAGCTGGCAAGTTCAGGGATTTTTAATGCACTATCAGATGGTCTAAGGGACAAGCATGATAAACTCAGGCGATTCTGTATGGCAACACTAGGAGAATTACTGTTCTACATTTCTACTCAATCTGATCAAGATACCAAAGAAATCAATGCCCAAGAATCCCCTTTGAAGGATAACAGGGCCACAGCTTCTTGGCAGGTTCCAAGTTCTGTAATTGCGCTGGTGTCATCAATCTTGCGTAAAGGTGAAGATGATCTAGCCCAGCTTTATGCTTTACGAACCATTGATAACATCTGTAGCCAAGGGACAGATTGGACTTCACGTTTCGCTTCCCAAGATGTAATCAGTCACCTGTGCTACATCTATAGAGCAACTGGTAAGCAGGAGAATACAAGACTTATTGCAGGATCTTGTTTGGCACACTTAGCTCGCTTCAGCTCATCTTGTATTCATTTAATACTGGAGAGGCTGGCCTTCAAGGATATCGCATGCACACTCATTAAAGGCAATTCACGTGAGCAGCAGATCAGTTTGAATCTTCTGAATTCAGCACTAGTTAACAGCCAAATCATACCAACCATGAACCGCTACATTCAGTCGTTAACAGAAGAGAAGCAGTTGGTTCCTGGACTCATCTCTCTTATTGAACAGGGAACTGATGTTCTGCGTGGCAAAACCCTTCTATTTGTTGCTCTTCTTTGCAAGAACAGTCGAAGATGGCTTCCTCATTTCTTTTGCAATGCAAAACTACTATCAGCAGTTGATAGATTGGGAAAGGAGAAGGAAGGCTTCATTCATCAATGCACAGAAGCATTTGTGCAGTTGGTTGCTTCATTGGTCCCAGGCATCCTTGACACTGTCTCTAGTGATATACAACAGGTTATGGGAGGCAAGCGTCATGGAGCTGCTACTGCTTTAACTGGACGAGCTCATCCAAAGAGCATAATTCATTTGTTTCCTGTTATCCTTCATCTTCTTGGGAGTGTTTCATTCAATCACAGAGTTGTGACGAGCCATGTATTGCTTCAGTTGGCAAATCTTATGAAAATTTTGGAAGCACCATTTCAGGCTCGGGATGATTTTCAAATGACACTATTGAGGGTTCTTGAGGCAGCCACGGAGGAGCCTTCTGTTATACTTAATGAACACAAAATATTCACAAGTCGAATCCTTCCAAGCTTATCCGTCTTGTACAAGGGCAATAAAGATGGTGATGCCAGATTCCTATGTTTAAAGATACTGTCCGATGTGATGATTGTGATCTTCAGTGACTCTTCATTGACGTCTAATGAGCAAACAGTATCTGACCTGGAAAAGATCTCTCAGAAGTATTTTCTCCCCATGTATCCATCATTTGCAGAGGATGAAGATCCAATACCTATATATGCCCAGAAACTTCTGGTAATGCTGATGGAGCATGATTATGTTAAGGTTTCTGATATTCTCAATGAAGCAACAGTATCCCGGTGCTTTGAATTTTTGCTAGGAGATTTGTCTAATGCAAATGTAAGTAATGTCAAGCTTTGCTTTGCATTGGCATCTGCTCCCGATATGGACACCGACATTCTTTCTCAGCTTCAAGTTGTCAGAAGAATAGGGAACCTGCTGGAGTTTGTGACTGCAAAAGATATGGATGATTTTCTAGAACCAACCTTGGAACTTTGCAGAGCATTCATTATCCGGGGCATCGGCAGTGACAAAATTGTGGCCCTTTCCAAAGAGCCCGCACTCCTTGTTGATAGTGCCTTCAGCATGAGCATTGCTGTCGATCAACAATCATGCGTCATGGATATATGCGACTTTGGTGGCAACATGGGCATTTTCCTCGACCTAGTTGGAAGTTCAGATCCACATATAAGCGATTTGGCATCAGACTGCTTGGTGCTGTTACTCAAAGCAGCACCTCGGGA-GGCTACGGTGGGC-TTGCTGACCAATCTTCCTAAACTGA-GCG-TTGTTCTGGACCTGCT-GAAGCATGGCACCTGCCT-AAGGCTGACTCGCCTGCTGTA-TTGCCTGGCCTTC-TCCTGC-AGGC-AATATCTAGCGCAAGGAATGATCGTGTCGATATCTTTGTCAGCCTTGATGCGAGTAGAAGCACTCGTGTCGGCATTCAAGGGTTCACATGATGGCTGCCTTGCTGACGCCGCCTCATATTTGGGCGCTGAACTGCAGCGTTTACCTCGCTGTGGTTGAGCCGAAGTTTGGTCAGGTGCTGGCTTGGTTGGCATTGTGCAAGTGATGTTCATAGGGATCATAAGAGAGGGCCTCAGCCTTGTATTTCTTCACCGTTTCTTGCACCAAGCTATGATCATGGGTTCTCACCATCCGAAGTGATGACTGATGAACCATCCGATTGGCTGTGTGATCATTTATCTATATGCAACGTGGAGCTGCTGTTCTTTCAGTATACCATTTCTGGCCAAATCTGGAGAGGCAGCTTGTGGCCAAAACCCTTCCTGTATTTCCCCTGTGCCAATTTTGGTTGGCGTTTCATCGGTTTTCAGTTTCTCACCATGTAATGCTGTAGAGTTTCATAGCCCTTAAAATCATGTATATTTGTACACTCCCTTTTACTTTACCAAGCAACGGGGTGGAAATTTATTGTTATGAATGCCTGTAAAGCTCTGTGAATCTGTGAACCAACAGGACTATATTGGAGCATGGTG] [+] EMBL AK102537 [TCTCAAATCGAAATCCCGCTCTCTCTCTCTCTCTCTCTCTCCCCCCCCATTCCTCCGCCTCAAATCGCAAACCCTAGCCGTCGCCGTCGACGAGAGGTCGACGAGAAGTCGACGAGAAGAGGAGGAGGAGAAGCTGCTGCTGGTGGTGGTGGTGCTCCGCCATGAACAACTTCCACGTCTACGAGGCCATCGGCCGCGGCAAGCACTCGACGGTGTACAAGGGGCGGAAGAAGAAGAGCATCGAGTACTTCGCCGTCAAGAGCGTCGACAAGTCGCAGCGGTCCAAGGTCCTCAATGAGGTCCGAATGCTTCATTCCTTAGATCATCCGAATGTTCTGAAATTTTACTCATGGTACGAAACCTCAGCTCATTTTTGGTTAATACTGGAGTACTGCGTTGGTGGAGACCTAAAGGGCTTGCTTGAGCAGGATAAGAAGCTGCCTGAAAATTCTATACATGACTTGGCTTATGATCTTGTGAAAGCTCTTCAGTTCTTGCATTCACAAGGAATTATATATTGTGATCTGAAACCATCAAATGTTTTACTTGATGAATCTGGGTGCATGAAGCTGTGCGATTTTGGATTAGCAAGGCGTTTGAAAGACATAGAGAAGACCAATCCTGGAGATGTGCCGCAACCTTTGAAGGGGACTCCATGTTATATGGCTCCTGAGTTGTTCCAAGAGGGAGGAGTGCATTCATATGCTTCAGATTTCTGGGCACTTGTTTGTGTATTGTATGAATGCTATTCAGGAAGGCCCCCTTTTGTGGCTAATGAATTTACCCAGCTAGTCAAATCTATAATTTCAGATCCTACACCACCTTTGCCTGATAACCCCTCAAGATCCTTTCAAAATCTGATCAATTGCTTACTCATGAAAGATCCTGCTGAAAGATTACAGTGGTCTGAACTATGCGAGCATCACTTTTGGAGGAGCAGAATGTCAATTATTCCTTTACCTCCTCAGCCTGCCTTTGACAACATGGTCGACCTTTCTGCTACACCATATTTAGTTGAGAGAAATGGTGATAAACCTTCTAGACAGTCCACACCACCCAAGCCCCGTGATGGCCTACGGAAGAAGGACGAAAATTCTGCTAAGGTGTTCACCCCTGTTAAGAATATGCTAAGTGGTAAGAAAAACAATGCAAAACCTTCCTGTAAGGCTGATGGATTGAAGGGTGTAAATATCCTCAGGATGTCTCGTGTAGCTAAGAGGAATTTGCAGAGAGAAAAAGACAAGGAGAACTACAGGCGACACCCTACAGAAGCTTCTGAGAATGATACAGAAGTTAAGATTGAAAACAATGATATGGAACTTGATTTTGGTGAAAATCCAGAAGGTGATGCACCTGATGACAATGATGGATCAGACAATCCTGGATCCGCAGAAGATGAAAAACTTTCCACTCAAGGCACTGATGGTAATGAAGAGAACTGCATGAGTAATCAGATGGATATGCTCACAGATGAAGGCCCAGTTAAGGCTGAAACCATGATAAAAACTGAACATAATTGTTCAGAAAATCTTGATGTGGTGGCCACTCCACCAAGTATTTGTATGAGGAAAGCACAACGAGCAAAGACAACTTCAGGTGCCGCAGCTGGTTCCGAGCCATCTGACATCTCTGCAGCATTCTGGCATCCAACAGATCTTGCTGTTAAACCAGTTATGCCTGGTAGGAAAGGAGATAAAGCTGTAGAGACAGTCCCTATGCTTCCGTTTGAAGCTCTTCCTGCTGTTGATTATATTAAGTTGCCACGGGAACAAATGAATGCATTCAATAGTCAGATACTTCAGAGTTTAAGTGGTACTTTTCAGGTTTCAGAGAAACAGAATATCATCAAATACCTGGAGATGTTAAGCATCAATTCTGATGCTGCAAATATAATCACAAATGGTCCAATTATGCTGTTGCTTATAAAAATGCTCCGTCTGTCAAAAACTTCAGTATTGCGTGTCCAAATTGCTTCACTTATGGGATTGTTGATACGCTACTCCACTATCCTTGATATAGAGCTGGCAAGTTCAGGGATTTTTAATGCACTATCAGATGGTCTAAGGGACAAGCATGATAAACTCAGGCGATTCTGTATGGCAACACTAGGAGAATTACTGTTCTACATTTCTACTCAATCTGATCAAGATACCAAAGAAATCAATGCCCAAGAATCCCCTTTGAAGGATAACAGGGCCACAGCTTCTTGGCAGGTTCCAAGTTCTGTAATTGCGCTGGTGTCATCAATCTTGCGTAAAGGTGAAGATGATCTAGCCCAGCTTTATGCTTTACGAACCATTGATAACATCTGTAGCCAAGGGACAGATTGGACTTCACGTTTCGCTTCCCAAGATGTAATCAGTCACCTGTGCTACATCTATAGAGCAACTGGTAAGCAGGAGAATACAAGACTTATTGCAGGATCTTGTTTGGCACACTTAGCTCGCTTCAGCTCATCTTGTATTCATTTAATACTGGAGAGGCTGGCCTTCAAGGATATCGCATGCACACTCATTAAAGGCAATTCACGTGAGCAGCAGATCAGTTTGAATCTTCTGAATTCAGCACTAGTTAACAGCCAAATCATACCAACCATGAACCGCTACATTCAGTCGTTAACAGAAGAGAAGCAGTTGGTTCCTGGACTCATCTCTCTTATTGAACAGGGAACTGATGTTCTGCGTGGCAAAACCCTTCTATTTGTTGCTCTTCTTTGCAAGAACAGTCGAAGATGGCTTCCTCATTTCTTTTGCAATGCAAAACTACTATCAGCAGTTGATAGATTGGGAAAGGAGAAGGAAGGCTTCATTCATCAATGCACAGAAGCATTTGTGCAGTTGGTTGCTTCATTGGTCCCAGGCATCCTTGACACTGTCTCTAGTGATATACAACAGGTTATGGGAGGCAAGCGTCATGGAGCTGCTACTGCTTTAACTGGACGAGCTCATCCAAAGAGCATAATTCATTTGTTTCCTGTTATCCTTCATCTTCTTGGGAGTGTTTCATTCAATCACAGAGTTGTGACGAGCCATGTATTGCTTCAGTTGGCAAATCTTATGAAAATTTTGGAAGCACCATTTCAGGCTCGGGATGATTTTCAAATGACACTATTGAGGGTTCTTGAGGCAGCCACGGAGGAGCCTTCTGTTATACTTAATGAACACAAAATATTCACAAGTCGAATCCTTCCAAGCTTATCCGTCTTGTACAAGGGCAATAAAGATGGTGATGCCAGATTCCTATGTTTAAAGATACTGTCCGATGTGATGATTGTGATCTTCAGTGACTCTTCATTGACGTCTAATGAGCAAACAGTATCTGACCTGGAAAAGATCTCTCAGAAGTATTTTCTCCCCATGTATCCATCATTTGCAGAGGATGAAGATCCAATACCTATATATGCCCAGAAACTTCTGGTAATGCTGATGGAGCATGATTATGTTAAGGTTTCTGATATTCTCAATGAAGCAACAGTATCCCGGTGCTTTGAATTTTTGCTAGGAGATTTGTCTAATGCAAATGTAAGTAATGTCAAGCTTTGCTTTGCATTGGCATCTGCTCCCGATATGGACACCGACATTCTTTCTCAGCTTCAAGTTGTCAGAAGAATAGGGAACCTGCTGGAGTTTGTGACTGCAAAAGATATGGATGATTTTCTAGAACCAACCTTGGAACTTTGCAGAGCATTCATTATCCGGGGCATCGGCAGTGACAAAATTGTGGCCCTTTCCAAAGAGCCCGCACTCCTTGTTGATAGTGCCTTCAGCATGAGCATTGCTGTCGATCAACAATCATGCGTCATGGATATATGCGACTTTGGTGGCAACATGGGCATTTTCCTCGACCTAGTTGGAAGTTCAGATCCACATATAAGCGATTTGGCATCAGACTGCTTGGTGCTGTTACTCAAAGCAGCACCTCGGGA GGCTACGGTGGGC TTGCTGACCAATCTTCCTAAACTGA GCG TTGTTCTGGACCTGCT GAAGCATGGCACCTGCCT AAGGCTGACTCGCCTGCTGTA TTGCCTGGCCTTC TCCTGC AGGC AATATCTAGCGCAAGGAATGATCGTGTCGATATCTTTGTCAGCCTTGATGCGAGTAGAAGCACTCGTGTCGGCATTCAAGGGTTCACATGATGGCTGCCTTGCTGACGCCGCCTCATATTTGGGCGCTGAACTGCAGCGTTTACCTCGCTGTGGTTGAGCCGAAGTTTGGTCAGGTGCTGGCTTGGTTGGCATTGTGCAAGTGATGTTCATAGGGATCATAAGAGAGGGCCTCAGCCTTGTATTTCTTCACCGTTTCTTGCACCAAGCTATGATCATGGGTTCTCACCATCCGAAGTGATGACTGATGAACCATCCGATTGGCTGTGTGATCATTTATCTATATGCAACGTGGAGCTGCTGTTCTTTCAGTATACCATTTCTGGCCAAATCTGGAGAGGCAGCTTGTGGCCAAAACCCTTCCTGTATTTCCCCTGTGCCAATTTTGGTTGGCGTTTCATCGGTTTTCAGTTTCTCACCATGTAATGCTGTAGAGTTTCATAGCCCTTAAAATCATGTATATTTGTACACTCCCTTTTACTTTACCAAGCAACGGGGTGGAAATTTATTGTTATGAATGCCTGTAAAGCTCTGTGAATCTGTGAACCAACAGGACTATATTGGAGCATGGTG] [+] EMBL AU062991 [ nACTGCAAAANATATGGATGATTTTCTAGAACCAACCTTGGAACTTTGCAGAGCATTCATTATCCGGGGCATCAGCAGTGACAAAATTGTGGCCCTTTCCAAAGAGCCCGCACTCCTTGTTGATAGTGCCTTCAGCATGAGCATTGCTGTCGATCAACAATCATGCGTCATGGATATATGCGACTTTGGTGGCAACATGGGCATTTTCCTCGACCTAGTTGGAAGTTCAGATCCACATATAAGCGATTTGGCATCAGACTGCTTGGTGCTGTTACTCAAAGCAGCACCTCGGGAGGGCTACGGTGGGCTTTGCTGACCAATCTTCCTAAACTGAGGCGTTTGTTCTGGACCTGCTNGAAGCATGGCACCTGCCTAAAGGCTGACTCGNCTGCTGTATTTGCCTGGNCTTCTTCCTGCAAGGCAAATATCTAGCGCAAGGAATTATCcgtnt ] [+] EMBL AU093260 [ GC AATATCTAGCGCAAGGAATNATCGTGTCGATATCTTTGTCAGCCTTGATGCGAGTAGAAGCACTCGTGTCGGCATTCAAGGGTTCACATGATGGCTGCCTTG TGACGCCGCCTCATATTTGGGCGCTGAACTGCAGCGTTTACCTCGCTGTGGTTGAGCCGAAGTTTGGTCAGGTGCTGGCTTGGTTGGCATTGTGCAAGTGATGTTCATAGGGATCATAAGAGAGGGCCTCAGCCTTGTATTTCTTCACCGTTTCTTGCACCAAGCTATGATCATGGGTTCTCACCATCCGAAGTGATGACTGATGAACCATCCGATTGGCTGTGTGATCATTTATCTATATGCAACGTGGAGCTGCTGTTCTTTCAGTATACCATTTCTGGCCAAATCTGGAGAGGCAGCTTGTGGCCAAAACCCTTCCTGTATTTCCCCTGTGCCAATTTTGGTTGGCGTTTCATCGGTTTTCAGTTTCTCACCATGTAATGCTGTAGAGTTTCATAGCCCTTAAAATCATGTATATTTGTACACTCCCTTTTACTTTACCAAGCAACGGGGTGGAAAaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||