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Oryza sativa
cluster # 4544 cluster # 4544       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4544#0 length = 1998 sequences # 3  

consensusID : consensus_4544#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1998
fasta sequence
                              [AGGAGGCCAAGTCCAAAGATGGCAACACAAGCGATTGCACCGATGCACGCCGCCGTCGTGCACCGCCACCACGTTCTACCACCCCGCCGCTGCGTGCGCCGCCGTGGCGTCTTCGTCCGCGCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGACGGACACGCTGTCCGCGGCCTTCTGGGACTACAACCTCCTCTTCCGGTCGCAGCGCGACGAGTGCCTCGACTCCATCCCGCTCCGCGTCACCGAGGGCGCGATCCCGCCCGACTTCCCGGCCGGCACCTACTACCTCGCCGGGCCGGGCATCTTCTCCGACGACCACGGCTCCACCGTCCACCCCCTCGACGGCCACGGCTACCTCCGCTCCTTCCGCTTCCGGCCCGGCGACCGCACCATCCACTACTCCGCGCGGTTCGTGGAGACGGCGGCGAAGAGGGAGGAGAGCCGGGACGGCGCGTCGTGGCGGTTCACGCACCGGGGGCCCTTCTCCGTGCTGCAGGGCGGGAAGAAGGTGGGCAATGTGAAGGTGATGAAGAACGTGGCCAACACCAGCGTGCTGCGGTGGGGCGGCCGGCTGCTCTGCCTCTGGGAGGGCGGCCAGCCGTACGAGGTTGACCCCCGGACGCTCGAGACCGTCGGCCCGTTCGACCTGCTCGGCCTCGCCGCCGCCGACGACAACAAGGCAACGAACGCGTCTGCAGCACGACGGCCGTGGCTGCAGGAGGCCGGCCTCGACGCCGCCGCGCGCCTGCTGCGCCCTGTTCTTAGCGGGGTGTTCGACATGCCGGGCAAGAGGCTGCTGGCGCACTACAAGATCGACCCGCGGCGGGGGCGTCTGCTGATGGTCGCCTGCAACGCCGAGGACATGCTCCTCCCGCGATCCCACTTCACTTTCTACGAGTTCGACGCCCACTTCGACCTCGTCCAGAAGCGTGAGTTCGTCGTGCCGGACCACCTCATGATCCACGACTGGGCCTTCACCGACACCCACTACATCCTCCTCGGCAACAGGATCAAGCTCGACATCCCCGGATCGCTGCTGGCATTGACGGGCACTCACCCGATGATCGCGGCGCTGGCCGTGGACCCGAGAAGGCAGTCGACGCCGGTGTACCTGCTTCCGCGCTCCCCGGAGACCGAGGCGGGCGGCCGCGACTGGAGCGTGCCGATCGAGGCGCCGTCGCAGATGTGGTCCGTGCACGTCGGCAACGCGTTCGAGGAGGCGAACCGCCGGGGCGGCCTCGACGTCCGGCTGCACATGTCAAGCTGCTCCTACCAGTGGTTCCATTTCCACAGGATGTTTGGTTACAATTGGCACCACAAGAAGCTGGACCCGTCGTTCATGAACGCGGCGAAGGGAAAGGAGTGGCTGCCTCGCCTCGTTCAGGTGGCCATCGAGCTCGACAGGACGGGAGAGTGCCGGAGGTGCTCAGTCAGGAGGCTGTCCGATCAGCACGCCAGGCCGGCGGACTTCCCGGCGATAAACCCAAGCTACGCCAACCAGAGGAACCGGTTCGTCTACGCCGGCGCCGCGTCCGGCTCCCGCAGATTCCTCCCGTACTTCCCGTTCGACAGCGTGGTGAAGGTCGACGTCTCCGATGGATCGGCGCGGTGGTGGTCTACCGACGGGCGCAAGTTCGTCGGCGAGCCGGTCTTCGTCCCGACCGGCGGCGGAGAGGATGGTGGCTATGTTCTTCTTGTAGAGTATGCAGTCTCCAAGCACAGATGCCGTCTAGTGGTGCTGGATGCAAAGAAGATAGGGACAGAGAATGCACTTGTGGCAAAACTAGAGGTGCCAAAGAACCTCACTTTTCCAATGGGATTCCATGGTTTCTGGGGAGATGAATGAGCATAGAGCAAGCATCAGATCCAGTCTAACTCTGGAGAGAAATTGTCTTGAAAAGGCAAGAATTTTGCCTCGTGTATTGATAAAAGAGAGTTTTGTGATAATCTGTACATGGTGGAGAGGAATTATCAGGGGAACCAAATAACTACTGTA]

[+] EMBL AK109771             [AGGAGGCCAAGTCCAAAGATGGCAACACAAGCGATTGCACCGATGCACGCCGCCGTCGTGCACCGCCACCACGTTCTACCACCCCGCCGCTGCGTGCGCCGCCGTGGCGTCTTCGTCCGCGCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGACGGACACGCTGTCCGCGGCCTTCTGGGACTACAACCTCCTCTTCCGGTCGCAGCGCGACGAGTGCCTCGACTCCATCCCGCTCCGCGTCACCGAGGGCGCGATCCCGCCCGACTTCCCGGCCGGCACCTACTACCTCGCCGGGCCGGGCATCTTCTCCGACGACCACGGCTCCACCGTCCACCCCCTCGACGGCCACGGCTACCTCCGCTCCTTCCGCTTCCGGCCCGGCGACCGCACCATCCACTACTCCGCGCGGTTCGTGGAGACGGCGGCGAAGAGGGAGGAGAGCCGGGACGGCGCGTCGTGGCGGTTCACGCACCGGGGGCCCTTCTCCGTGCTGCAGGGCGGGAAGAAGGTGGGCAATGTGAAGGTGATGAAGAACGTGGCCAACACCAGCGTGCTGCGGTGGGGCGGCCGGCTGCTCTGCCTCTGGGAGGGCGGCCAGCCGTACGAGGTTGACCCCCGGACGCTCGAGACCGTCGGCCCGTTCGACCTGCTCGGCCTCGCCGCCGCCGACGACAACAAGGCAACGAACGCGTCTGCAGCACGACGGCCGTGGCTGCAGGAGGCCGGCCTCGACGCCGCCGCGCGCCTGCTGCGCCCTGTTCTTAGCGGGGTGTTCGACATGCCGGGCAAGAGGCTGCTGGCGCACTACAAGATCGACCCGCGGCGGGGGCGTCTGCTGATGGTCGCCTGCAACGCCGAGGACATGCTCCTCCCGCGATCCCACTTCACTTTCTACGAGTTCGACGCCCACTTCGACCTCGTCCAGAAGCGTGAGTTCGTCGTGCCGGACCACCTCATGATCCACGACTGGGCCTTCACCGACACCCACTACATCCTCCTCGGCAACAGGATCAAGCTCGACATCCCCGGATCGCTGCTGGCATTGACGGGCACTCACCCGATGATCGCGGCGCTGGCCGTGGACCCGAGAAGGCAGTCGACGCCGGTGTACCTGCTTCCGCGCTCCCCGGAGACCGAGGCGGGCGGCCGCGACTGGAGCGTGCCGATCGAGGCGCCGTCGCAGATGTGGTCCGTGCACGTCGGCAACGCGTTCGAGGAGGCGAACCGCCGGGGCGGCCTCGACGTCCGGCTGCACATGTCAAGCTGCTCCTACCAGTGGTTCCATTTCCACAGGATGTTTGGTTACAATTGGCACCACAAGAAGCTGGACCCGTCGTTCATGAACGCGGCGAAGGGAAAGGAGTGGCTGCCTCGCCTCGTTCAGGTGGCCATCGAGCTCGACAGGACGGGAGAGTGCCGGAGGTGCTCAGTCAGGAGGCTGTCCGATCAGCACGCCAGGCCGGCGGACTTCCCGGCGATAAACCCAAGCTACGCCAACCAGAGGAACCGGTTCGTCTACGCCGGCGCCGCGTCCGGCTCCCGCAGATTCCTCCCGTACTTCCCGTTCGACAGCGTGGTGAAGGTCGACGTCTCCGATGGATCGGCGCGGTGGTGGTCTACCGACGGGCGCAAGTTCGTCGGCGAGCCGGTCTTCGTCCCGACCGGCGGCGGAGAGGATGGTGGCTATGTTCTTCTTGTAGAGTATGCAGTCTCCAAGCACAGATGCCGTCTAGTGGTGCTGGATGCAAAGAAGATAGGGACAGAGAATGCACTTGTGGCAAAACTAGAGGTGCCAAAGAACCTCACTTTTCCAATGGGATTCCATGGTTTCTGGGGAGATGAATGAGCATAGAGCAAGCATCAGATCCAGTCTAACTCTGGAGAGAAATTGTCTTGAAAAGGCAAGAATTTTGCCTCGTGTATTGATAAAAGAGAGTTTTGTGATAATCTGTACATGGTGGAGAGGAATTATCAGGGGAACCAAATAACTACTGTA]
[+] EMBL OSC106381            [                AGATGGCAACACAAGCGATTGCACCGATGCACGCAGCCGTCGTGCACCGCCACCACGTTCTACCACCCCGCCGCTGCGTGCGCAGNCGTGGCGTCTTCGTCCGCGCCTCGGCCGCCGNCGCCGNCGNCGCCGCCGAGACGGACACGCTGTCCGCGGCCTTCTGGGACTACAACCTCCTCTTCCGGTCGCAGCG GAGAAGTGCCTCGACTCCATCCCGCTCCGCGTTANCGAGGGCGCGATCCCGNCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C96746               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCCGCGGCGGGGGCGTCTGCTGATGGTCGCCTGCAACGCCGAGGACATGTTCCTCCCGCGATCCCACTTCACTTTCTACGAGTTCGACGCCCACTTCGACCTCGTCCAGAAGCGTGAGTTCGTCGTGCCGGACCACCTCATGATCCACGACTGGGCCTTCACCGACACCCACTACATCCTCCTCGGCAACAGGATCAAGCTCGACATCCCCGGATCGCTGCTGGCATTGACGGGCACTCACCCGATGATCGCGGCGCTGGCCGTGGACCCGAGAAGGCAGTCGACGCCGGTGTACCTG TTCCGCGCTCCCCGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_4544#0 AGGAGGCCAAGTCCAAAGATGGCAACACAAGCGATTGCACCGATGCACGCCGCCGTCGTG CACCGCCACCACGTTCTACCACCCCGCCGCTGCGTGCGCCGCCGTGGCGTCTTCGTCCGC GCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGAGACGGACACGCTGTCCGCGGCCTTCTGG GACTACAACCTCCTCTTCCGGTCGCAGCGCGACGAGTGCCTCGACTCCATCCCGCTCCGC GTCACCGAGGGCGCGATCCCGCCCGACTTCCCGGCCGGCACCTACTACCTCGCCGGGCCG GGCATCTTCTCCGACGACCACGGCTCCACCGTCCACCCCCTCGACGGCCACGGCTACCTC CGCTCCTTCCGCTTCCGGCCCGGCGACCGCACCATCCACTACTCCGCGCGGTTCGTGGAG ACGGCGGCGAAGAGGGAGGAGAGCCGGGACGGCGCGTCGTGGCGGTTCACGCACCGGGGG CCCTTCTCCGTGCTGCAGGGCGGGAAGAAGGTGGGCAATGTGAAGGTGATGAAGAACGTG GCCAACACCAGCGTGCTGCGGTGGGGCGGCCGGCTGCTCTGCCTCTGGGAGGGCGGCCAG CCGTACGAGGTTGACCCCCGGACGCTCGAGACCGTCGGCCCGTTCGACCTGCTCGGCCTC GCCGCCGCCGACGACAACAAGGCAACGAACGCGTCTGCAGCACGACGGCCGTGGCTGCAG GAGGCCGGCCTCGACGCCGCCGCGCGCCTGCTGCGCCCTGTTCTTAGCGGGGTGTTCGAC ATGCCGGGCAAGAGGCTGCTGGCGCACTACAAGATCGACCCGCGGCGGGGGCGTCTGCTG ATGGTCGCCTGCAACGCCGAGGACATGCTCCTCCCGCGATCCCACTTCACTTTCTACGAG TTCGACGCCCACTTCGACCTCGTCCAGAAGCGTGAGTTCGTCGTGCCGGACCACCTCATG ATCCACGACTGGGCCTTCACCGACACCCACTACATCCTCCTCGGCAACAGGATCAAGCTC GACATCCCCGGATCGCTGCTGGCATTGACGGGCACTCACCCGATGATCGCGGCGCTGGCC GTGGACCCGAGAAGGCAGTCGACGCCGGTGTACCTGCTTCCGCGCTCCCCGGAGACCGAG GCGGGCGGCCGCGACTGGAGCGTGCCGATCGAGGCGCCGTCGCAGATGTGGTCCGTGCAC GTCGGCAACGCGTTCGAGGAGGCGAACCGCCGGGGCGGCCTCGACGTCCGGCTGCACATG TCAAGCTGCTCCTACCAGTGGTTCCATTTCCACAGGATGTTTGGTTACAATTGGCACCAC AAGAAGCTGGACCCGTCGTTCATGAACGCGGCGAAGGGAAAGGAGTGGCTGCCTCGCCTC GTTCAGGTGGCCATCGAGCTCGACAGGACGGGAGAGTGCCGGAGGTGCTCAGTCAGGAGG CTGTCCGATCAGCACGCCAGGCCGGCGGACTTCCCGGCGATAAACCCAAGCTACGCCAAC CAGAGGAACCGGTTCGTCTACGCCGGCGCCGCGTCCGGCTCCCGCAGATTCCTCCCGTAC TTCCCGTTCGACAGCGTGGTGAAGGTCGACGTCTCCGATGGATCGGCGCGGTGGTGGTCT ACCGACGGGCGCAAGTTCGTCGGCGAGCCGGTCTTCGTCCCGACCGGCGGCGGAGAGGAT GGTGGCTATGTTCTTCTTGTAGAGTATGCAGTCTCCAAGCACAGATGCCGTCTAGTGGTG CTGGATGCAAAGAAGATAGGGACAGAGAATGCACTTGTGGCAAAACTAGAGGTGCCAAAG AACCTCACTTTTCCAATGGGATTCCATGGTTTCTGGGGAGATGAATGAGCATAGAGCAAG CATCAGATCCAGTCTAACTCTGGAGAGAAATTGTCTTGAAAAGGCAAGAATTTTGCCTCG TGTATTGATAAAAGAGAGTTTTGTGATAATCTGTACATGGTGGAGAGGAATTATCAGGGG AACCAAATAACTACTGTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)