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Oryza sativa
cluster # 4551 cluster # 4551       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4551#0 length = 1484 sequences # 3  

consensusID : consensus_4551#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1484
fasta sequence
                              [TACGCCAATTCTTTTCCCTCGCCGATCTCCCCCAATTTCCAGCTCGATCCCCATCCCCTCTCCTCCCTCCTTCTTCCTCCGCCTCCCACCCTCCCACCGCGACCGCGTCGACCCGCCACCCACCCAACCGCGCCGAGATCCAGATCCAGATCCGCCGCCATGAACCCGGGGCGCCCGGCGCCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCCGCCGTCGAGAGCGCCGCGCGCTACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGCAGCGGCGGCGGCGTTGGCGGCCCGCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCGGAGTTCAACCGCCGCGCCTCCAAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTCGCCCGCCTCGCCAAACTGGCAAAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATACAAGAGCTGACTGCAGTTATCAAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGACCTACAGGTTCTCTGCAATTCACAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAATCATTCCACTACAGTTGTGGACAATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTTAAGGAAGTTCTTACCATGCGGACAGAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATGTTCTCATCATCAGCTGCGAACAATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTTACCAGGGATGGTCCTGAATCCTCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACTACTCCATTGTTTCAGAGGAAGAAGACTAATGGAGATCATGGAGCATCATCATCATCTTCTCAGCCATTCATGCAGCAGCAGTTAGTACAGCAGGACAGTTACATGCAGAGTAGAGCGGAGGCTCTCCAAAATGTTGAATCAACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCAACTATGGTTTCTCAGCAGGGAGAGCTAGCAATCAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGAGCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATGAAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGATTTCCACTTGCAATGTCACCATGAATGTTCTGCATAGTTTGTCTGCTATGCGTAGTATATTCTTTTGATTTTTACCAAACTACAACATGTACACAATTTTCACCCGGGATGATAAGCAGCCGTCTAGCCTTTTGTGGTCATGTAAATTGGGAGAAGCTCCAGAACTGGTATGTTAAAGTTTTCACTACTTGTTCGATGTACCATTTGATGACACACGTTGGTAGCAATGTGGAAGAAAACTGTCACTGCCAACGGGTGAACCCCTAGGAGGGGGTGGTCAGGTGGTGATG]

[+] EMBL AK106425             [TACGCCAATTCTTTTCCCTCGCCGATCTCCCCCAATTTCCAGCTCGATCCCCATCCCCTCTCCTCCCTCCTTCTTCCTCCGCCTCCCACCCTCCCACCGCGACCGCGTCGACCCGCCACCCACCCAACCGCGCCGAGATCCAGATCCAGATCCGCCGCCATGAACCCGGGGCGCCCGGCGCCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCCGCCGTCGAGAGCGCCGCGCGCTACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGCAGCGGCGGCGGCGTTGGCGGCCCGCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCGGAGTTCAACCGCCGCGCCTCCAAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTCGCCCGCCTCGCCAAACTGGCAAAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATACAAGAGCTGACTGCAGTTATCAAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGACCTACAGGTTCTCTGCAATTCACAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAATCATTCCACTACAGTTGTGGACAATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTTAAGGAAGTTCTTACCATGCGGACAGAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATGTTCTCATCATCAGCTGCGAACAATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTTACCAGGGATGGTCCTGAATCCTCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACTACTCCATTGTTTCAGAGGAAGAAGACTAATGGAGATCATGGAGCATCATCATCATCTTCTCAGCCATTCATGCAGCAGCAGTTAGTACAGCAGGACAGTTACATGCAGAGTAGAGCGGAGGCTCTCCAAAATGTTGAATCAACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCAACTATGGTTTCTCAGCAGGGAGAGCTAGCAATCAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGAGCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATGAAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGATTTCCACTTGCAATGTCACCATGAATGTTCTGCATAGTTTGTCTGCTATGCGTAGTATATTCTTTTGATTTTTACCAAACTACAACATGTACACAATTTTCACCCGGGATGATAAGCAGCCGTCTAGCCTTTT                                                                                                                                                             ]
[+] EMBL C91719               [                            CCCCCAATTTCCAGCTCGATCCCCATCCCCTCTCCTCCCTCCTTCTTCCTCCGCCTCCCACCCTCCCACCGCGACCGCGTCGACCCGCCACCCACCCAACCGCGCCGAGATCCAGATCCAGATCCGCCGCCATGAACCCGGGGCGCCCGGCG CGGCGTCGTTCCGCGACCGNACCAACGAGTTCCGCGNCGCCGTCGAGAGCGCCG GCGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB680626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGAGCTATCAATCAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGAGCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATGAAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGATTTCCACTTGCAATGTCACCATGAATGTTCTGCATAATTTGTCTGCTATGCGTAGTATATTCTTTTGATTTTTACCAAACTACAACATGTACACAATTTTCACCCGGGATGATAAGCAGCCGTCTAGCCTTTTGTGGTCATGTAAATTGGGAGAAGCTCCAGAACTGGTATGTTAAAGTTTTCACTACTTGTTCGATGTACCATTTGATGACACACGTTGGTAGCAATGTGGAAGAAAACTGTCACTGCCAACGGGTGAACCCCTAGGAGGGGGTGGTCAGGTGGTGATG]


>consensus_4551#0 TACGCCAATTCTTTTCCCTCGCCGATCTCCCCCAATTTCCAGCTCGATCCCCATCCCCTC TCCTCCCTCCTTCTTCCTCCGCCTCCCACCCTCCCACCGCGACCGCGTCGACCCGCCACC CACCCAACCGCGCCGAGATCCAGATCCAGATCCGCCGCCATGAACCCGGGGCGCCCGGCG CCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCCGCCGTCGAGAGCGCCGCGCGC TACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGCAGCGGCGGCGGCGTTGGCGGC CCGCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCGGAGTTCAACCGCCGCGCCTCC AAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTCGCCCGCCTCGCCAAACTGGCA AAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATACAAGAGCTGACTGCAGTTATC AAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGACCTACAGGTTCTCTGCAATTCA CAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAATCATTCCACTACAGTTGTGGAC AATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTTAAGGAAGTTCTTACCATGCGG ACAGAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATGTTCTCATCATCAGCTGCGAAC AATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTTACCAGGGATGGTCCTGAATCC TCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACTACTCCATTGTTTCAGAGGAAG AAGACTAATGGAGATCATGGAGCATCATCATCATCTTCTCAGCCATTCATGCAGCAGCAG TTAGTACAGCAGGACAGTTACATGCAGAGTAGAGCGGAGGCTCTCCAAAATGTTGAATCA ACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCAACTATGGTTTCTCAGCAGGGA GAGCTAGCAATCAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGAGCT CAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATGAAG ATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGATTTCCA CTTGCAATGTCACCATGAATGTTCTGCATAGTTTGTCTGCTATGCGTAGTATATTCTTTT GATTTTTACCAAACTACAACATGTACACAATTTTCACCCGGGATGATAAGCAGCCGTCTA GCCTTTTGTGGTCATGTAAATTGGGAGAAGCTCCAGAACTGGTATGTTAAAGTTTTCACT ACTTGTTCGATGTACCATTTGATGACACACGTTGGTAGCAATGTGGAAGAAAACTGTCAC TGCCAACGGGTGAACCCCTAGGAGGGGGTGGTCAGGTGGTGATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)