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Oryza sativa
cluster # 4556 cluster # 4556       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4556#0 length = 1658 sequences # 3  

consensusID : consensus_4556#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1658
fasta sequence
                              [GATAGAATTCTCTCTGCTTCGCCCTTCGCGGTTTATCCGCTACACCGAAAAAAAAATACCCACAAAACCCCGTGAGGCCGTGACAACGCGCCATGGCCGCCGCGGCGCCCGCGCTGCCGGCGTTCGCCTCGCTTCTCCTCCCCTCATCCAGCTCGCCTCCCCGCCGCATCCCGTGGCCCCGCCCTCTGCCTTCTCGCCGGGGCGCTCTCCGCCCCGTCAAGCTGCTCCCCGCCATCTCAGCTGTGGAGAAGGGCAAGGGCGCCGCCGCCGAAGCCAAGGAGGTGGAGCTGGAAGGGATGCCGCCGGAGTACTACGACGAGGAATGGCAAGCTCGTCAGCGGGAAAAGACTAAGGAATGGAATGCATATCGGAAGAAAGAGGAAGCTGAGGAAGAAAGGCTAACAAATGAATACCGTGAAATAGGCATGCGTTTGAAAGCTTACCCACAGGAAGAAGTTCGCAAAGCTCGGATTTTGGTTTCAAGTTTTATAAGAGCTGGTGAAGATATTGAAGAGGAAATTGAGAAGGCTGCTGAAAGAGGAGAGCTTACTGAACTTGTTCTTATGGTCATATGGAATCGACTTGATGTTGCTCGCCGCGATGATGAGAGGGATGCCATCAGAAGCCTTGATCTCTTATACAGAAGGGTAGAGACGGAAATTTTAAGGAGTGAAGCAACTCCTGCTATGAGATTGCTCAATGACCTTCTGAATCTTCATGATGGATCTGATGATGACAAGTGGTTAAAGAAATGTAAAAAACATATGCTTGAAGTTTTTCCCAGAGAAGACCCGTTCACCATGGTCTTTCCTGCTGGTTTCAACATGGAGGAACATCAAGGACAGATCAAGCTGCCACCTCAGGATGATGATGTTCTTCTAAGAGTTGATTTCATCAGGGAAGTTGATGAGCTCTTGAAGGAAGTTCAAGCTGCACATGAAAACAATAAGGTCCCAACTGGTAATGACCCGGAAGCTGTTGCGACCAAGTTGAAGTATCAAGAGAAGCTGCGGACCATACGTCAAGTGGAATCTCTCCTGGAACTGGCATCCTCCCTGAAATGGTGAGGATTGAGTTTGCAGAGGACCATGAAATTCTGCGCACATAGGACTAGAAGTTACCGGCTGAGTACTTGATAGCTGCAATTAGGGTGCAGCCTTTTGAGCTGATTCTCAGGTTTCTGCTAGTTAGAAACTCCTAGCATTTGAATACAAAGGTTAGCTGATATCTGCTTGGGCGTCAATGCATTTTCGTAGAATATTTTCTGCACCTGGGTGTCCAACTCCTATTAGATTTGTACTGCTCTAGTCATTCAGAGTTCAACTGTAACTCAAGCAGTGAGGCTTTGCTCTGGATTAATGTATCATCATGAGAATGGTGTGAGGGTATCTCACACGCTCAAGCTCTAGCATGAGGCAGATGAGTTTCAAGCCAACAAGCTGTGTCTCTAGTGTGCATAATCGAGATGCAGAGATGGTTGAGTACTTGAGTTCTGAAGTTCCCAAGTCAAATACTGTGTAAAGATTTTCGTTTGAAGGAAAAGAAAACATTGAATGTAACATTAGTACAATAACTTGTAAAAGTTTTTTTTTGTATGGAGCATGTGAAAATATCTGGAACAATCCATGGTTTCAACAGTAGCAAAATTTGGTCACATA]

[+] EMBL AK059594             [GATAGAATTCTCTCTGCTTCGCCCTTCGCGGTTTATCCGCTACACCGAAAAAAAAATACCCACAAAACCCCGTGAGGCCGTGACAACGCGCCATGGCCGCCGCGGCGCCCGCGCTGCCGGCGTTCGCCTCGCTTCTCCTCCCCTCATCCAGCTCGCCTCCCCGCCGCATCCCGTGGCCCCGCCCTCTGCCTTCTCGCCGGGGCGCTCTCCGCCCCGTCAAGCTGCTCCCCGCCATCTCAGCTGTGGAGAAGGGCAAGGGCGCCGCCGCCGAAGCCAAGGAGGTGGAGCTGGAAGGGATGCCGCCGGAGTACTACGACGAGGAATGGCAAGCTCGTCAGCGGGAAAAGACTAAGGAATGGAATGCATATCGGAAGAAAGAGGAAGCTGAGGAAGAAAGGCTAACAAATGAATACCGTGAAATAGGCATGCGTTTGAAAGCTTACCCACAGGAAGAAGTTCGCAAAGCTCGGATTTTGGTTTCAAGTTTTATAAGAGCTGGTGAAGATATTGAAGAGGAAATTGAGAAGGCTGCTGAAAGAGGAGAGCTTACTGAACTTGTTCTTATGGTCATATGGAATCGACTTGATGTTGCTCGCCGCGATGATGAGAGGGATGCCATCAGAAGCCTTGATCTCTTATACAGAAGGGTAGAGACGGAAATTTTAAGGAGTGAAGCAACTCCTGCTATGAGATTGCTCAATGACCTTCTGAATCTTCATGATGGATCTGATGATGACAAGTGGTTAAAGAAATGTAAAAAACATATGCTTGAAGTTTTTCCCAGAGAAGACCCGTTCACCATGGTCTTTCCTGCTGGTTTCAACATGGAGGAACATCAAGGACAGATCAAGCTGCCACCTCAGGATGATGATGTTCTTCTAAGAGTTGATTTCATCAGGGAAGTTGATGAGCTCTTGAAGGAAGTTCAAGCTGCACATGAAAACAATAAGGTCCCAACTGGTAATGACCCGGAAGCTGTTGCGACCAAGTTGAAGTATCAAGAGAAGCTGCGGACCATACGTCAAGTGGAATCTCTCCTGGAACTGGCATCCTCCCTGAAATGGTGAGGATTGAGTTTGCAGAGGACCATGAAATTCTGCGCACATAGGACTAGAAGTTACCGGCTGAGTACTTGATAGCTGCAATTAGGGTGCAGCCTTTTGAGCTGATTCTCAGGTTTCTGCTAGTTAGAAACTCCTAGCATTTGAATACAAAGGTTAGCTGATATCTGCTTGGGCGTCAATGCATTTTCGTAGAATATTTTCTGCACCTGGGTGTCCAACTCCTATTAGATTTGTACTGCTCTAGTCATTCAGAGTTCAACTGTAACTCAAGCAGTGAGGCTTTGCTCTGGATTAATGTATCATCATGAGAATGGTGTGAGGGTATCTCACACGCTCAAGCTCTAGCATGAGGCAGATGA                                                                                                                                                                                                                                           ]
[+] EMBL AK099875             [                                          CACCGAAAAAAAAATACCCACAAAACCCGGTGAGGCCGTGACAACGCGCCATGGCCGCCGCGGCGCCCGCGCTGCCGGCGTTCGCCTCGCTTCTCCTCCCCTCATCCAGCTCGCCTCCCCGCCGCATCCCGTGGCCCCGCCCTCTGCCTTCTCGCCGGGGCGCTCTCCGCCCCGTCAAGCTGCTCCCCGCCATCTCAGCTGTGGAGAAGGGCAAGGGCGCCGCCGCCGAAGCCAAGGAGGTGGAGCTGGAAGGGATGCCGCCGGAGTACTACGACGAGGAATGGCAAGCTCGTCAGCGGGAAAAGACTAAGGAATGGAATGCATATCGGAAGAAAGAGGAAGCTGAGGAAGAAAGGCTAACAAATGAATACCGTGAAATAGGCATGCGTTTGAAAGCTTACCCACAGGAAGAAGTTCGCAAAGCTCGGATTTTGGTTTCAAGTTTTATAAGAGCTGGTGAAGATATTGAAGAGGAAATTGAGAAGGCTGCTGAAAGAGGAGAGCTTACTGAACTTGTTCTTATGGTCATATGGAATCGACTTGATGTTGCTCGCCGCGATGATGAGAGGGATGCCATCAGAAGCCTTGATCTCTTATACAGAAGGGTAGAGACGGAAATTTTAAGGAGTGAAGCAACTCCTGCTATGAGATTGCTCAATGACCTTCTGAATCTTCATGATGGATCTGATGATGACAAGTGGTTAAAGAAATGTAAAAAACATATGCTTGAAGTTTTTCCCAGAGAAGACCCGTTCACCATGGTCTTTCCTGCTGGTTTCAACATGGAGGAACATCAAGGACAGATCAAGCTGCCACCTCAGGATGATGATGTTCTTCTAAGAGTTGATTTCATCAGGGAAGTTGATGAGCTCTTGAAGGAAGTTCAAGCTGCACATGAAAACAATAAGGTCCCAACTGGTAATGACCCGGAAGCTGTTGCGACCAAGTTGAAGTATCAAGAGAAGCTGCGGACCATACGTCAAGTGGAATCTCTCCTGGAACTGGCATCCTCCCTGAAATGGTGAGGATTGAGTTTGCAGAGGACCATGAAATTCTGCGCACATAGGACTAGAAGTTACCGGCTGAGTACTTGATAGCTGCAATTAGGGTGCAGCCTTTTGAGCTGATTCTCAGGTTTCTGCTAGTTAGAAACTCCTAGCATTTGAATACAAAGGTTAGCTGATATCTGCTTGGGCGTCAATGCATTTTCGTAGAATATTTTCTGCACCTGGGTGTCCAACTCCTATTAGATTTGTACTGCTCTAGTCATTCAGAGTTCAACTGTAACTCAAGCAGTGAGGCTTTGCTCTGGATTAATGTATCATCATGAGAATGGTGTGAGGGTATCTCACACGCTCAAGCTCTAGCATGAGGCAGATGAGTTTCAAGCCAACAAGCTGTGTCTCTAGTGTGCATAATCGAGATGCAGAGATGGTTGAGTACTTGAGTTCTGAAGTTCCCAAGTCAAATACTGTGTAAAGATTTTCGTTTGAAGGAAAAGAAAACATTGAATG                                                                                                      ]
[+] EMBL AK100039             [                                                                 AACCCCGTGAGGCCGTGACAACGCGCCATGGCCGCCGCGGCGCCCGCGCTGCCGGCGTTCGCCTCGCTTCTCCTCCCCTCATCCAGCTCGCCTCCCCGCCGCATCCCGTGGCCCCGCCCTCTGCCTTCTCGCCGGGGCGCTCTCCGCCCCGTCAAGCTGCTCCCCGCCATCTCAGCTGTGGAGAAGGGCAAGGGCGCCGCCGCGGAAGCCAAGGAGGTGGAGCTGGAAGGGATGCCGCCGGAGTACTACGACGAGGAATGGCAAGCTCGTCAGCGGGAAAAGACTAAGGAATGGAATGCATATCGGAAGAAAGAGGAAGCTGAGGAAGAAAGGCTAACAAATGAATACCGTGAAATAGGCATGCGTTTGAAAGCTTACCCACAGGAAGAAGTTCGCAAAGCTCGGATTTTGGTTTCAAGTTTTATAAGAGCTGGTGAAGATATTGAAGAGGAAATTGAGAAGGCTGCTGAAAGAGGAGAGCTTACTGAACTTGTTCTTATGGTCATATGGAATCGACTTGATGTTGCTCGCCGCGATGATGAGAGGGATGCCATCAGAAGCCTTGATCTCTTATACAGAAGGGTAGAGACGGAAATTTTAAGGAGTGAAGCAACTCCTGCTATGAGATTGCTCAATGACCTTCTGAATCTTCATGATGGATCTGATGATGACAAGTGGTTAAAGAAATGTAAAAAACATATGCTTGAAGTTTTTCCCAGAGAAGACCCGTTCACCATGGTCTTTCCTGCTGGTTTCAACATGGAGGAACATCAAGGACAGATCAAGCTGCCACCTCAGGATGATGATGTTCTTCTAAGAGTTGATTTCATCAGGGAAGTTGATGAGCTCTTGAAGGAAGTTCAAGCTGCACATGAAAACAATAAGGTCCCAACTGGTAATGACCCGGAAGCTGTTGCGACCAAGTTGAAGTATCAAGAGAAGCTGCGGACCATACGTCAAGTGGAATCTCTCCTGGAACTGGCATCCTCCCTGAAATGGTGAGGATTGAGTTTGCAGAGGACCATGAAATTCTGCGCACATAGGACTAGAAGTTACCGGCTGAGTACTTGATAGCTGCAATTAGGGTGCAGCCTTTTGAGCTGATTCTCAGGTTTCTGCTAGTTAGAAACTCCTAGCATTTGAATACAAAGGTTAGCTGATATCTGCTTGGGCGTCAATGCATTTTCGTAGAATATTTTCTGCACCTGGGTGTCCAACTCCTATTAGATTTGTACTGCTCTAGTCATTCAGAGTTCAACTGTAACTCAAGCAGTGAGGCTTTGCTCTGGATTAATGTATCATCATGAGAATGGTGTGAGGGTATCTCACACGCTCAAGCTCTAGCATGAGGCAGATGAGTTTCAAGCCAACAAGCTGTGTCTCTAGTGTGCATAATCGAGATGCAGAGATGGTTGAGTACTTGAGTTCTGAAGTTCCCAAGTCAAATACTGTGTAAAGATTTTCGTTTGAAGGAAAAGAAAACATTGAATGTAACATTAGTACAATAACTTGTAAAAGTTTTTTTTTGTATGGAGCATGTGAAAATATCTGGAACAATCCATGGTTTCAACAGTAGCAAAATTTGGTCACATA]


>consensus_4556#0 GATAGAATTCTCTCTGCTTCGCCCTTCGCGGTTTATCCGCTACACCGAAAAAAAAATACC CACAAAACCCCGTGAGGCCGTGACAACGCGCCATGGCCGCCGCGGCGCCCGCGCTGCCGG CGTTCGCCTCGCTTCTCCTCCCCTCATCCAGCTCGCCTCCCCGCCGCATCCCGTGGCCCC GCCCTCTGCCTTCTCGCCGGGGCGCTCTCCGCCCCGTCAAGCTGCTCCCCGCCATCTCAG CTGTGGAGAAGGGCAAGGGCGCCGCCGCCGAAGCCAAGGAGGTGGAGCTGGAAGGGATGC CGCCGGAGTACTACGACGAGGAATGGCAAGCTCGTCAGCGGGAAAAGACTAAGGAATGGA ATGCATATCGGAAGAAAGAGGAAGCTGAGGAAGAAAGGCTAACAAATGAATACCGTGAAA TAGGCATGCGTTTGAAAGCTTACCCACAGGAAGAAGTTCGCAAAGCTCGGATTTTGGTTT CAAGTTTTATAAGAGCTGGTGAAGATATTGAAGAGGAAATTGAGAAGGCTGCTGAAAGAG GAGAGCTTACTGAACTTGTTCTTATGGTCATATGGAATCGACTTGATGTTGCTCGCCGCG ATGATGAGAGGGATGCCATCAGAAGCCTTGATCTCTTATACAGAAGGGTAGAGACGGAAA TTTTAAGGAGTGAAGCAACTCCTGCTATGAGATTGCTCAATGACCTTCTGAATCTTCATG ATGGATCTGATGATGACAAGTGGTTAAAGAAATGTAAAAAACATATGCTTGAAGTTTTTC CCAGAGAAGACCCGTTCACCATGGTCTTTCCTGCTGGTTTCAACATGGAGGAACATCAAG GACAGATCAAGCTGCCACCTCAGGATGATGATGTTCTTCTAAGAGTTGATTTCATCAGGG AAGTTGATGAGCTCTTGAAGGAAGTTCAAGCTGCACATGAAAACAATAAGGTCCCAACTG GTAATGACCCGGAAGCTGTTGCGACCAAGTTGAAGTATCAAGAGAAGCTGCGGACCATAC GTCAAGTGGAATCTCTCCTGGAACTGGCATCCTCCCTGAAATGGTGAGGATTGAGTTTGC AGAGGACCATGAAATTCTGCGCACATAGGACTAGAAGTTACCGGCTGAGTACTTGATAGC TGCAATTAGGGTGCAGCCTTTTGAGCTGATTCTCAGGTTTCTGCTAGTTAGAAACTCCTA GCATTTGAATACAAAGGTTAGCTGATATCTGCTTGGGCGTCAATGCATTTTCGTAGAATA TTTTCTGCACCTGGGTGTCCAACTCCTATTAGATTTGTACTGCTCTAGTCATTCAGAGTT CAACTGTAACTCAAGCAGTGAGGCTTTGCTCTGGATTAATGTATCATCATGAGAATGGTG TGAGGGTATCTCACACGCTCAAGCTCTAGCATGAGGCAGATGAGTTTCAAGCCAACAAGC TGTGTCTCTAGTGTGCATAATCGAGATGCAGAGATGGTTGAGTACTTGAGTTCTGAAGTT CCCAAGTCAAATACTGTGTAAAGATTTTCGTTTGAAGGAAAAGAAAACATTGAATGTAAC ATTAGTACAATAACTTGTAAAAGTTTTTTTTTGTATGGAGCATGTGAAAATATCTGGAAC AATCCATGGTTTCAACAGTAGCAAAATTTGGTCACATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)