These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4585#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1991 fasta sequence [CGTCTTCCTCTGATCCTCTCGCCGCCGCTGCTCCCCCAACCGAATCCGACGACCTCGCCGCCGGGCACGCCCGCCGCACGCGACCTCCTCTTCCTCCGCCGGAAGCCACCGGACCTCCTCGCCGACGGATTGCACCCGGCAATGACGATGGTGGAGGCCGAGGCCGGCAAGGAGGCGATCCGGCGAGCCCTGCGGTCTCTGCGGCGGAGGCATCTCGTCGAGGAGGGCGCCCACCGCCCGGCCATCGAGGCGCTCGCCCGGCCCTTCGCCGCCCAAGCGGTGGAGTGGAAAGAGAAGGCTGAGAAGCATGAATTGGAGCTGCAGCAATGCTACAAGGCTCAGTCACGTTTTGTCCGAGCAGCTCGTTACCGAGATAGAAGAGGGGAAAGCATCAAAAGCGCTGCTTAAAGAGAAAGAAACACTGATTACTACCATGCAGACTGAACTCGAGCAAACCAGGGAAGAAAATACGCAGCTCAAGCAGTCGCTTGAAGAAAAAACAAGCGCTTTAGATCTTATAATTCAGGAGCACCAGGCAGTTAAAGCTGAACTTGAACAGGCATTAACAAAACAGAAAGTGGCAGAAGATGAAAACAGGAATCTGATTGATCGATGGATGCTTGAGAAGATGAAGGATGCAGAGAGGCTTAATGAGGCAAATGCAATGTATGAGGAGATGGTTCTAAAGCTGAAGTCAGCTGGTGTTGGTGGTATACAACACAATGCACTACAAGAAGCTGATGGCATCATTCGTCGTTCTGAAGCTGGGTACATGGACATCATGGAAACACCAATCCCATCTACATGCAGAATCACTATCCGTGCTCATGATGGTGGCTGTGGATCTATAATTTT-CAGCATAACACAGACAAGCTAATCAGTGGTGGCCAGGATCAAACTGTCAAGATTTGGTCTGCACATACCGGTGCTTTAACCTCCACTCTACAAGGCTGTTTGGGGTCTGTCAATGATCTTGCTGTGACTAATGACAACAAGTTTGTGATTGCTGCCTGTAGCTCTAACAAATTGTTTGTATGGGAAGTTAATGGGGGGCGCCCACGTCACACTCTGACTGGTCACACAAAAAATGTTTCATCCGTTGATGCAAGCTGGGTGAAGAGCTGTGTTCTTGCTAGTTCATCCAATGATCATACCATCAAGATTTGGGATCTTCAGTCAGGCTTCTGCAAAAGCACCATAATGTCAGGGAGCAACGCCAACTCACTAGCTTTCATTGATGGTGTCACCCTTTGCTCGGGTCATAGGGATGGACACCTTCGGTTATGGGACATCCGAAGTGCAAAATGCACTAGTCAGACATTCGCTCATCTTGACGTAAGCTCTGTCAGTGTGTCACGGAATAGAAATTTCATTCTTACAAGTGGAAAGGATAACGTGCACAACCTTTTTGATCCTAGAACAATGGAAGTTTGTGGAAAATTCAAGGCCATGGGTAACAGAGTGGTTAGCAGCTGGGGCAGGCCTTGCATAAGCCCTGATGAAAACTCCATAGCTGCTGGTGCTAATGATGGGTCTGTTTACATATGGTCAAGATTGAAAAAGGATGGGGTACCGACGATCCTACAGGGCCATTCTTCGTCGGTAGTTTCAAGTTCATGGTGTGGGTTAGGACCTCTTGCTACCGCTGACAAGCATCATATCTATATCTGGACTTGAGATCTTTGGTTCCTTTGGTCATTGAATCCAGGTTTTTGAGAGTTTTGTTCCAATGTATTGATGTCTACCTCGCTTTCCTCTCAAAGATGCTAGTTTACATGTAAATAGCTTAGTTTATAAGCATTGTGAATAACTTAATCCGCAAATTGACAGTAAACCTCATTGGCTTACTTTTCTCTGACATCTGTTAATGGTTGGTCAATGCTCAGCTGGGCTGGGCTTTTAAAGCAGCAAATTTTCTCTAGGTTTTAGTATGTGCAATTGCTGATCCATATGGCTATTTTTTGGATGAAAAATGGATAATCATTCATCAC] [+] EMBL AK069559 [CGTCTTCCTCTGATCCTCTCGCCGCCGCTGCTCCCCCAACCGAATCCGACGACCTCGCCGCCGGGCACGCCCGCCGCACGCGACCTCCTCTTCCTCCGCCGGAAGCCACCGGACCTCCTCGCCGACGGATTGCACCCGGCAATGACGATGGTGGAGGCCGAGGCCGGCAAGGAGGCGATCCGGCGAGCCCTGCGGTCTCTGCGGCGGAGGCATCTCGTCGAGGAGGGCGCCCACCGCCCGGCCATCGAGGCGCTCGCCCGGCCCTTCGCCGCCCAAGCGGTGGAGTGGAAAGAGAAGGCTGAGAAGCATGAATTGGAGCTGCAGCAATGCTACAAGGCTCAGTCACGTTTTGTCCGAGCAGCTCGTTACCGAGATAGAAGAGGGGAAAGCATCAAAAGCGCTGCTTAAAGAGAAAGAAACACTGATTACTACCATGCAGACTGAACTCGAGCAAACCAGGGAAGAAAATACGCAGCTCAAGCAGTCGCTTGAAGAAAAAACAAGCGCTTTAGATCTTATAATTCAGGAGCACCAGGCAGTTAAAGCTGAACTTGAACAGGCATTAACAAAACAGAAAGTGGCAGAAGATGAAAACAGGAATCTGATTGATCGATGGATGCTTGAGAAGATGAAGGATGCAGAGAGGCTTAATGAGGCAAATGCAATGTATGAGGAGATGGTTCTAAAGCTGAAGTCAGCTGGTGTTGGTGGTATACAACACAATGCACTACAAGAAGCTGATGGCATCATTCGTCGTTCTGAAGCTGGGTACATGGACATCATGGAAACACCAATCCCATCTACATGCAGAATCACTATCCGTGCTCATGATGGTGGCTGTGGATCTATAATTTT CAGCATAACACAGACAAGCTAATCAGTGGTGGCCAGGATCAAACTGTCAAGATTTGGTCTGCACATACCGGTGCTTTAACCTCCACTCTACAAGGCTGTTTGGGGTCTGTCAATGATCTTGCTGTGACTAATGACAACAAGTTTGTGATTGCTGCCTGTAGCTCTAACAAATTGTTTGTATGGGAAGTTAATGGGGGGCGCCCACGTCACACTCTGACTGGTCACACAAAAAATGTTTCATCCGTTGATGCAAGCTGGGTGAAGAGCTGTGTTCTTGCTAGTTCATCCAATGATCATACCATCAAGATTTGGGATCTTCAGTCAGGCTTCTGCAAAAGCACCATAATGTCAGGGAGCAACGCCAACTCACTAGCTTTCATTGATGGTGTCACCCTTTGCTCGGGTCATAGGGATGGACACCTTCGGTTATGGGACATCCGAAGTGCAAAATGCACTAGTCAGACATTCGCTCATCTTGACGTAAGCTCTGTCAGTGTGTCACGGAATAGAAATTTCATTCTTACAAGTGGAAAGGATAACGTGCACAACCTTTTTGATCCTAGAACAATGGAAGTTTGTGGAAAATTCAAGGCCATGGGTAACAGAGTGGTTAGCAGCTGGGGCAGGCCTTGCATAAGCCCTGATGAAAACTCCATAGCTGCTGGTGCTAATGATGGGTCTGTTTACATATGGTCAAGATTGAAAAAGGATGGGGTACCGACGATCCTACAGGGCCATTCTTCGTCGGTAGTTTCAAGTTCATGGTGTGGGTTAGGACCTCTTGCTACCGCTGACAAGCATCATATCTATATCTGGACTTGAGATCTTTGGTTCCTTTGGTCATTGAATCCAGGTTTTTGAGAGTTTTGTTCCAATGTATTGATGTCTACCTCGCTTTCCTCTCAAAGATGCTAGTTTACATGTAAATAGCTTAGTTTATAAGCATTGTGAATAACTTAATCCGCAAATTGACAGTAAACCTCATTGGCTTACTTTTCTCTGACATCTGTTAATGGTTGGTCAATGCTCAGCTGGGCTGGGCTTTTAAAGCAGCAAATTTTCTCTAGGTTTTAGTATGTGCAATTGCTGATCCATATGGCTATTTTTTGGATGAAAAATGGATAATCATTCATCAC] [+] EMBL CB685506 [ gtgccctGCCGAGGCCGGCAAGGAGGCGATCCGGCGAGCCCTGCGGTCTCTGCGGCGGAGGCATCTCGTCGAGGAGGGCGCCCACCGCCCGGCCATCGAGGCGCTCGCCCGGCCCTTCGCCGCCCAAGCGGTGGAGTGGAAAGAGAAGGCTGAGAAGCATGAATTGGAGCTGCAGCAATGCTACAAGGCTCAGTCACG TTTGTCCGAGCAGCTCGTTACCGAGATAGAAGAGGGGAAAGCATCAAAAGCGCTGCTTAAAGAGAAAGAAACACTGATTACTACCATGCAGACTGAACTCGAGCAAACCAGGGAAGAAAATACGCAGCTCAAGCAGTCGCTTGAAGAAAAAACAAGCGCTTTAGATCTTATAATTCAGGAGCACCAGGCAGTTAAAGCTGAACTTGAACAGGCATTAACAAAACAGAAAGTGGCAGAAGATGAAAACAGGAATCTGATTGATCGATGGATGCTTGAGAAGATGAAGGATGCAGAGAGGCTTAATGAGGCAAATGCAATGTATGAGGAGATGGTTCTAAAGCTGAAGTCAGCTGGTGTTGGTGGTATACAACACAATGCACTACAAGAAGCTGATGGCATCATTCGTCGTTCTGAAGCTGGGTACATGGACATCATGGAAACACCAATCCCATCTACATGCAGAATCACTATCCGTGCTCATGATGGTGGCTGTGGATCTATAATTTTCCAGCATAACACAGACAAGCTAATCAGTGGTGGCCAGGATCAAACTGTCAAGATTTGGTCT ] [+] EMBL CA764618 [ aggggGATGGTGACACCCTTTGCTCGGGTCATAGGGATGGACACCTTCGGTTATGGGACATCCGAAGTGCAAAATGCACTAGTCAGACATTCGCTCATCTTGACGTAAGCTCTGTCAGTGTGTCACGGAATAGAAATTTCATTCTTACAAGTGGAAAGGATAACGTGCACAACCTTTTTGATCCTAGAACAATGGAAGTTTGTGGAAAATTCAAGGCCATGGGTAACAGAGTGGTTAGCAGCTGGGGCAGGCCTTGCATAAGCCCTGATGAAAACTCCATAGCTGCTGGTGCTAATGATGGGTCTGTTTACATATGGTCAAGATTGAAAAAGGATGGGGTACCGACGATCCTACAGGGCCATTCTTCGTCGGTAGTTTCAAGTGCATGGTGTGGGTTAGGACCTCTTGCTACCGCTGACAAGCATCATATCTATATCTGGACTTGAGATCTTTGGTTCCTTTGGTCATTGAATCCAGGTTTTTGAGAGTTTTGTTCCAATGTATTGATGTCTACCTCGCTTTCCTCTCAAAGATGCTAGTTTACATGTAAATAGCTTAGTTTATAAGCATTGTGAATAACTTAATCCGCAAAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||