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Oryza sativa
cluster # 4636 cluster # 4636       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4636#0 length = 910 sequences # 3  

consensusID : consensus_4636#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 910
fasta sequence
                              [CGCCTTCAATTAATTCGCTCTCCTCCTCCTCGTCGTCGTCGTCGTCGTCGCCATCGTCGTCGCGATCTCCATAGCTAGCTCTAGCGATGGGTTGCGCGTTCTCGTCGGCGGGGGCGCTGAGGCCGTTCGAGGGGGTGAGGGTGATCCACATCAACGGCTACGTGGAGGACTTCGACGCGCCGGTGACGGTGGGGCAGGTCACCGGCAAGCCGGCGGCGGGGGAGGGGCAGGGGCAGGGGAGGTACGTGCTGTGCTCGTCGGCGCACCTGCTGCAGCCGGGGCGGGGGCCGTTCAGGGCGGACGACCCACTGGAGGCCGGCACGGTGTACTTCCTCCTCCCGCAGTCCATCTTCCAGTCCGAGTCCTCCGCCGTCGACCTCGCCTGCCTCATGAACCGCCTCACCTCCCTCGCCCGCAAGGGCGCCGCCGCCGCCTCCAGCCCCGTCGAGGCCCTCTTCACCGCCGGAATTCACCACCCGCCGCAGCCCTCCTCCTCCTGCAGCAGCTCCAAGCCGGCGGCGGCGGCGGCGAGCTCGGGGTCGCCGGAACGGTGCTACCTCGCGGCGGCGGCGCGGCCGGCGGCGTGGAAGCCGCGGCTGGATCGCATCGACGAGTCCTTCGGCCGCGCATCCATGCGGAGCTCCTCCGCTCGCAGCACCGAGGCCTGAACATTTTTTTTCTTCCTCTTTTTTAATCTTTTTTCTCTTTATTATTTTATTTTCTTGTTACTTTTCTTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGATGATAATTTCTGGATTTTTTTTTCTTTACAAAGTTAGTTTTCTGTTGTTTGTATATCCAAAAGGTGTAAATATAATCTAATTTGTAATGTTGGTTTGGATTGGATTCGGATCATCTGGTCTATCTTATCTAGCAACTTAAAAAA]

[+] EMBL AK099967             [CGCCTTCAATTAATTCGCTCTCCTCCTCCTCGTCGTCGTCGTCGTCGTCGCCATCGTCGTCGCGATCTCCATAGCTAGCTCTAGCGATGGGTTGCGCGTTCTCGTCGGCGGGGGCGCTGAGGCCGTTCGAGGGGGTGAGGGTGATCCACATCAACGGCTACGTGGAGGACTTCGACGCGCCGGTGACGGTGGGGCAGGTCACCGGCAAGCCGGCGGCGGGGGAGGGGCAGGGGCAGGGGAGGTACGTGCTGTGCTCGTCGGCGCACCTGCTGCAGCCGGGGCGGGGGCCGTTCAGGGCGGACGACCCACTGGAGGCCGGCACGGTGTACTTCCTCCTCCCGCAGTCCATCTTCCAGTCCGAGTCCTCCGCCGTCGACCTCGCCTGCCTCATGAACCGCCTCACCTCCCTCGCCCGCAAGGGCGCCGCCGCCGCCTCCAGCCCCGTCGAGGCCCTCTTCACCGCCGGAATTCACCACCCGCCGCAGCCCTCCTCCTCCTGCAGCAGCTCCAAGCCGGCGGCGGCGGCGGCGAGCTCGGGGTCGCCGGAACGGTGCTACCTCGCGGCGGCGGCGCGGCCGGCGGCGTGGAAGCCGCGGCTGGATCGCATCGACGAGTCCTTCGGCCGCGCATCCATGCGGAGCTCCTCCGCTCGCAGCACCGAGGCCTGAACATTTTTTTTCTTCCTCTTTTTTAATCTTTTTTCTCTTTATTATTTTATTTTCTTGTTACTTTTCTTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGATGATAATTTCTGGATTTTTTTTTCTTTACAAAGTTAGTTTTCTGTTGTTTGTATATCCAAAAGGTGTAAATATAATCTAATTTGTAATGTTGGTTTGGATTG                                          ]
[+] EMBL AU057143             [                        CCTCCTCGTCGTCNTCGTCGTCGTCGCCATCNTCGTCGCGATCNCCATAGCTAGCTCTAGCGATGGGTTGCGCGTTCTCGTCGGCGGGGGCGCTGAGGCCGTTCGAGGGGGTGAGGGTGATCCACATCAACGGCTACGTGGAGGACTTCGACGCGCCGGTGACGGTGGGGCAGGTCACCGGCAAGCCGGCGGCGGGGGAGGGGCAGGGGCAGGGGAGGTACGTGCTGTGCTCGTCGGCGCACCTGCTGCAGCCGGGGCGGGGGCCGTTCAGGGCGGACGACCCACTGGAGGCCGGCACGGTGTACTTCCTCCTCCCGCAGTCCATCTTCCAGTCCGAGTCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU173943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCTCCAAGCCGGCGGCGGCGGCGGCGAGCTCGGGGTCGCCGGAACGGTGCTACCTCGCGNCGGCGGCGCGGCCGGCGGCGTGGAANCCGCGGCTGGATCGCATCGACGAGTCCTTCGGCCGCGCATCCATGCGGAGCTCCTCCGCTCGCAGCACCGAGGCCTGAACATTTTTTTTCTTCCTCTTTTTTAATCTTTTTTCTCTTTATTATTTTATTTTCTTGTTACTTTTCTTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGATGATAATTTCTGGATTTTTTTTTCTTTACAAAGTTAGTTTTCTGTTGTTTGTATATCCAAAAGGTGTAAATATAATCTAATTTGTAATGTTGGTTTGGATTGGATTCGGATCATCTGGTCTATCTTATCTAGCAACTTAAAAAA]


>consensus_4636#0 CGCCTTCAATTAATTCGCTCTCCTCCTCCTCGTCGTCGTCGTCGTCGTCGCCATCGTCGT CGCGATCTCCATAGCTAGCTCTAGCGATGGGTTGCGCGTTCTCGTCGGCGGGGGCGCTGA GGCCGTTCGAGGGGGTGAGGGTGATCCACATCAACGGCTACGTGGAGGACTTCGACGCGC CGGTGACGGTGGGGCAGGTCACCGGCAAGCCGGCGGCGGGGGAGGGGCAGGGGCAGGGGA GGTACGTGCTGTGCTCGTCGGCGCACCTGCTGCAGCCGGGGCGGGGGCCGTTCAGGGCGG ACGACCCACTGGAGGCCGGCACGGTGTACTTCCTCCTCCCGCAGTCCATCTTCCAGTCCG AGTCCTCCGCCGTCGACCTCGCCTGCCTCATGAACCGCCTCACCTCCCTCGCCCGCAAGG GCGCCGCCGCCGCCTCCAGCCCCGTCGAGGCCCTCTTCACCGCCGGAATTCACCACCCGC CGCAGCCCTCCTCCTCCTGCAGCAGCTCCAAGCCGGCGGCGGCGGCGGCGAGCTCGGGGT CGCCGGAACGGTGCTACCTCGCGGCGGCGGCGCGGCCGGCGGCGTGGAAGCCGCGGCTGG ATCGCATCGACGAGTCCTTCGGCCGCGCATCCATGCGGAGCTCCTCCGCTCGCAGCACCG AGGCCTGAACATTTTTTTTCTTCCTCTTTTTTAATCTTTTTTCTCTTTATTATTTTATTT TCTTGTTACTTTTCTTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGATGATAATTTCTGGA TTTTTTTTTCTTTACAAAGTTAGTTTTCTGTTGTTTGTATATCCAAAAGGTGTAAATATA ATCTAATTTGTAATGTTGGTTTGGATTGGATTCGGATCATCTGGTCTATCTTATCTAGCA ACTTAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)