These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4646#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2673 fasta sequence [CCCTTTCCCCGCCGCCCGCGCACCCACGCGTCTCTCTCCCTCTCTCTCCGCCGCCGCCGCCGCCGCAGCCAGCCAGCCATCCAGCCATGTCGGGTTGGGACGAGGGCGCCGTCTTCTACAGCGACCAGGCGCAGTTCCCGCGCGGCGGCCCCGGCGGCGACCCCTCCGCCGACCTCACCCGCCACTCCGCCCTCCGCAAGTTCAAGGAGTTCCTCCGCGGCTTCACCGGCCCAACCGGCGACTTCCCCTACCGCGAGAGCCTGGTGCACAACCGCGACCATGTCACCGTCGCCATCGAGGACCTCGACGCCTTCGACGCCGAGCTGTCCGACAAGATCCGGAAGTCTCCCGCTGATTACCTACCGCTGTTTGAGACGGCTGCGTCCGAGGTCCTCGCGAGCCTTCGGTCCAAGGTCGCTGGAGAGACCGGCGAGATGGAGGAGCCCGCCACCGGCGACGTGCAGATCTTCTTGTCCTCAAAGGAGAACTGCCTGTCCATGAGGTCTATTGGGGCGGATTACATGTCCAAGCTGGTGAAGATTGCCGGGATCACAATCGCCGCGTCGAGGGTGAAAGCTAAGGCCACTCATGTCACGCTGCTCTGCAAGAACTGCAGAAGTGTGAAAACGGTGCCGTGTAGGCCTGGCCTTGGTGGGGCTATTGTCCCACGATCGTGCGACCATGTTCCTCAGCCTGGAGAAGAGCCTTGCCCCTTGGACCCCTGGATTGCAGTTCCAGATAAGAGCAAGTATGTGGATCTCCAGACCCTCAAATTGCAGGAAAATCCTGAGGATGTTCCAACTGGTGAGCTCCCGAGGAATATGCTGCTGTCCGTAGACAGGCATCTTGTTCAGACCATTGTTCCTGGAACTAGATTAACTGTAATTGGTATCTACAGTGTCTACCAAGCATCTGCAAACCAAAAGGGTGCTGTTGGAGTCAAACAGCCTTACATTAGAGTTGTGGGGTTGGAGCAGTCCCGAGATGCCAACTCGAATGGTCCCTCAAATTTTACACTTGATGAGGAAATGGAATTCAAAGAATTTGCACAGAGGCCAGATGCATATGTCAAGATTTGCTCAATGATTGGCCCTTCAATTTATGGCCATTCTGATGTCAAGAAAGCTATTGCATGCTTGCTGTTTGGTGGCTCAAAGAAGAGGCTACCGGATGGTGTCCGTTTGAGAGGGGACATTCATGTCTTGCTGCTGGGTGATCCATCAACAGCAAAATCACAGTTCCTCAAGTTTGTGGAGAAGACAGCGCCGATTGCTGTCTATACATCTGGGAAAGGTTCATCAGCAGCTGGTCTCACAGCGTCAGTAATTCGGGACGGTAGCTCTCGAGAGTTTTATTTGGAAGGAGGGGCCATGGTTTTGGCTGATGGTGGAGTTGTTTGTATTGATGAGTTTGACAAAATGAGGCCTGAGGACCGAGTTGCAATTCACGAAGCAATGGAACAGCAGACCATCTCGATTGCCAAAGCTGGCATTACAACAGTACTCAATTCAAGGACCTCGGTACTAGCAGCTGCCAATCCAATTGCAGGGCGCTACGATGATCTTAAGACTGCACAAGATAACATTGATCTGCAGACAACCATCCTTTCTAGATTTGATCTAATCTTTATTGTTAAAGATGTCAGAATGTATGATCAAGACAAGCGAATTGCAAGCCACATCATTAAGGTGCATGCCAGTGGTGCTGCTGCTTCATCCAAGAATACAGATGCTAGTGAAGGAGAGAATTGGCTAAAAAGGTACATTGAGTATTGCCGTGTTACTTGTAAACCACGACTCTCAGAAAAGGCAGCAGAGATGCTTCAGAACAAATATGTGGAGATTAGACAGAAAATGAGACAACAAGCTCATGAAACAGGGAGGGCTGCAGCTATACCCATCACTGTGCGGCAGCTTGAAGCCATTATACGTTTGAGTGAATCTCTTGCAAAGATGAGATTGACAAGTGTGGCTACACCAGAGCATGTTGAAGAGGCA-TTTAGGCTGTTCAA-TGTCTCCACTGTTGATGCCGCAAGATCTGGAATCAATGAGCATTTGAACCTATCACCAGATATTGCAAATGAGATCAAGCAAGCTGAGGCACAAATAAAGAGAAGGATGGGAATTGGAAGCCACATATCCGAGCGACGCCTGATCGATGAACTAAATAGGATGGGGATGAATGAATCCATTGTGCGAAGAGCCCTTCTGATCATGCACCAAAGGGATGAAGTGGAGTACAAGAGAGAGCGCCATGTCATTGTCCGGAAGGCTTGAGGTGAACTGTGGAGTATTTATAAATCGAGGACAACTTCTATTCAGACTGTATAAGGCTATGAGTTCACTGAAACTGTAATCTCTGGGAGAAGACAAGGACATGTTTGAGTTTCGGTTGATCACTGACATGACCATTGTAATCTGCAAGAGTAGAAGAAATGCACTCCGTCCTTGATGAAACTGTAGTTAAACTACAGTATTAAAGATGTAACTGTAGTGAAACCATG-TAACCAGGG-TTCTGAAATGGCTAAT-GTATTAAACTACAGTATTA-ATTCATGGATATAAATGGCTAATATTCTGCANTGCCCCAGACAAGAATTNAAAGGGAGCAGAATTCAGCTGATTAAAAAAAAAAAAAAAAACAAAAANCGCCCNCCCCCCGCGGTNGAACCTNCAN] [+] EMBL AK073980 [CCCTTTCCCCGCCGCCCGCGCACCCACGCGTCTCTCTCCCTCTCTCTCCGCCGCCGCCGCCGCCGCAGCCAGCCAGCCATCCAGCCATGTCGGGTTGGGACGAGGGCGCCGTCTTCTACAGCGACCAGGCGCAGTTCCCGCGCGGCGGCCCCGGCGGCGACCCCTCCGCCGACCTCACCCGCCACTCCGCCCTCCGCAAGTTCAAGGAGTTCCTCCGCGGCTTCACCGGCCCAACCGGCGACTTCCCCTACCGCGAGAGCCTGGTGCACAACCGCGACCATGTCACCGTCGCCATCGAGGACCTCGACGCCTTCGACGCCGAGCTGTCCGACAAGATCCGGAAGTCTCCCGCTGATTACCTACCGCTGTTTGAGACGGCTGCGTCCGAGGTCCTCGCGAGCCTTCGGTCCAAGGTCGCTGGAGAGACCGGCGAGATGGAGGAGCCCGCCACCGGCGACGTGCAGATCTTCTTGTCCTCAAAGGAGAACTGCCTGTCCATGAGGTCTATTGGGGCGGATTACATGTCCAAGCTGGTGAAGATTGCCGGGATCACAATCGCCGCGTCGAGGGTGAAAGCTAAGGCCACTCATGTCACGCTGCTCTGCAAGAACTGCAGAAGTGTGAAAACGGTGCCGTGTAGGCCTGGCCTTGGTGGGGCTATTGTCCCACGATCGTGCGACCATGTTCCTCAGCCTGGAGAAGAGCCTTGCCCCTTGGACCCCTGGATTGCAGTTCCAGATAAGAGCAAGTATGTGGATCTCCAGACCCTCAAATTGCAGGAAAATCCTGAGGATGTTCCAACTGGTGAGCTCCCGAGGAATATGCTGCTGTCCGTAGACAGGCATCTTGTTCAGACCATTGTTCCTGGAACTAGATTAACTGTAATTGGTATCTACAGTGTCTACCAAGCATCTGCAAACCAAAAGGGTGCTGTTGGAGTCAAACAGCCTTACATTAGAGTTGTGGGGTTGGAGCAGTCCCGAGATGCCAACTCGAATGGTCCCTCAAATTTTACACTTGATGAGGAAATGGAATTCAAAGAATTTGCACAGAGGCCAGATGCATATGTCAAGATTTGCTCAATGATTGGCCCTTCAATTTATGGCCATTCTGATGTCAAGAAAGCTATTGCATGCTTGCTGTTTGGTGGCTCAAAGAAGAGGCTACCGGATGGTGTCCGTTTGAGAGGGGACATTCATGTCTTGCTGCTGGGTGATCCATCAACAGCAAAATCACAGTTCCTCAAGTTTGTGGAGAAGACAGCGCCGATTGCTGTCTATACATCTGGGAAAGGTTCATCAGCAGCTGGTCTCACAGCGTCAGTAATTCGGGACGGTAGCTCTCGAGAGTTTTATTTGGAAGGAGGGGCCATGGTTTTGGCTGATGGTGGAGTTGTTTGTATTGATGAGTTTGACAAAATGAGGCCTGAGGACCGAGTTGCAATTCACGAAGCAATGGAACAGCAGACCATCTCGATTGCCAAAGCTGGCATTACAACAGTACTCAATTCAAGGACCTCGGTACTAGCAGCTGCCAATCCAATTGCAGGGCGCTACGATGATCTTAAGACTGCACAAGATAACATTGATCTGCAGACAACCATCCTTTCTAGATTTGATCTAATCTTTATTGTTAAAGATGTCAGAATGTATGATCAAGACAAGCGAATTGCAAGCCACATCATTAAGGTGCATGCCAGTGGTGCTGCTGCTTCATCCAAGAATACAGATGCTAGTGAAGGAGAGAATTGGCTAAAAAGGTACATTGAGTATTGCCGTGTTACTTGTAAACCACGACTCTCAGAAAAGGCAGCAGAGATGCTTCAGAACAAATATGTGGAGATTAGACAGAAAATGAGACAACAAGCTCATGAAACAGGGAGGGCTGCAGCTATACCCATCACTGTGCGGCAGCTTGAAGCCATTATACGTTTGAGTGAATCTCTTGCAAAGATGAGATTGACAAGTGTGGCTACACCAGAGCATGTTGAAGAGGCA TTTAGGCTGTTCAA TGTCTCCACTGTTGATGCCGCAAGATCTGGAATCAATGAGCATTTGAACCTATCACCAGATATTGCAAATGAGATCAAGCAAGCTGAGGCACAAATAAAGAGAAGGATGGGAATTGGAAGCCACATATCCGAGCGACGCCTGATCGATGAACTAAATAGGATGGGGATGAATGAATCCATTGTGCGAAGAGCCCTTCTGATCATGCACCAAAGGGATGAAGTGGAGTACAAGAGAGAGCGCCATGTCATTGTCCGGAAGGCTTGAGGTGAACTGTGGAGTATTTATAAATCGAGGACAACTTCTATTCAGACTGTATAAGGCTATGAGTTCACTGAAACTGTAATCTCTGGGAGAAGACAAGGACATGTTTGAGTTTCGGTTGATCACTGACATGACCATTGTAATCTGCAAGAGTAGAAGAAATGCACTCCGTCCTTGATGAAACTGTAGTTAAACTACAGTATTAAAGATGTAACTGTAGTGAAACCATG TAACCAGGG TTCTGAAATGGCTAAT GTATTAAACTACAGTATTA ATTCATGGATATAAATGGCTAATATTCTGCA ] [+] EMBL OSSS30019 [ TTTTGGCTGATGGTGGAGTTGTTTGTATTGATGAGTTTGACAAAATGAGGCCTGAGNCCCGAGTTGCAATTCACGAAGCAATGGAACAGCAGACCATCTCGATTGCCAAAGCTGGCATTACAACAGTACTCAATTCAAGGACCTCGGTACTAGCAGCTGCCAATCCAATTGCAGGGCGCTACGATGATCTTAAGACTGCACAAGATAAC ] [+] EMBL CA764819 [ aaggGGGAGGGCTGCAGCTNTACCCATCACTGTGCGGCAGCCTGAAGCC TTNTACGTTTGAGTGAATCTCTTGCAAAGATGAGATTGACAAGTGTGGCTACACCANAGCATGTTGAAGAGGCACTTTGGGCTGTTCAACTGTCTCCACTGTTGATGCCGCAAGATCTGNAATCAATGAGCATTTGANCCTATCACCAGATATTGCAAATGAGATCAAGCANGCTGAGGCACAAATAAAGAGANGGATGGGAATTGNAAGCCACATATNCGAGCGACGCCTGATCGATGAACTAAATAGGATGGCGATGAATGAATCCATTGTGCGAAGAGCCCTTCTGNTCATGCACCAAAGGGATGAAGNGNAGTACAAGAGAGAGCGCCATGTCATTGTCCGGAAGGCTTGAGGTGAACTGNGGAGNATTTATAAATCGAGGACAACTTCTATTCAGACTGTATAAGGCTATGAGTTCACTGAAACTGTAATCTCTGGGAGAAGACAAGGACATGTTTGAGTTTCGGTTGATCACTGACATGACCATTGTAATCTGNAANAGTACAANAAATGCAGNCCGTCCTTGATGAAACTGTAGTTAAACTACAGTATTAAAGATGTAACTGTAGCGAAACCATGNTAACCAGGGCNTCTGAAATGGCTAATGGTTTTAAACTACAGTATTANTTTCATGGATATAAATGNCTAATATTCTGCANTGCCCCAGACAAGAATTNAAAGGGAGCAGAATTCAGCTGATTAAAAAAAAAAAAAAAAACAAAAANCGCCCNCCCCCCGCGGTNGAACCTNCAN] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||