cluster # 4648

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Oryza sativa
cluster # 4648 cluster # 4648 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4648#0 length = 403 sequences # 3

consensusID : consensus_4648#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 403
fasta sequence

                              [CCCAAAAGCAGCTCCATCCAAACCCAATCAAGCCCCACTCCCCACCAACCCCCTTCCCTCAATTATAAGCCTACAACTACTGCTGATTGCTTCAGACTGATCCAAGAAAGGGAAGTTTGGTTGTGGTGCAGAGAGGTGCAGAAGGGGGAGGGAGGGCTCTGAATTTTCAAGAAAGGGACCATCTTTCTGCTGCTGCTGCTGTCCGGGTTGGTGCTTGTTGAATTTGAGGCTAAAGAAGTCGGAATTGGAGGTTTTGTAAGAGGGAAACAATGGCTGGCAAGGAAATCTACCACAAGATGAAGGACAAGGTGAAAGATGCTTTTAGTTCGTCAGGACCAGAAACAGGGAAAGGAAAAACAAAATTGTCAGGCAAGCGTGTCAAGCATGGTTACCATCTTGTGAA]

[+] EMBL CB668037             [CCCAAAAGCAGCTCCATCCAAACCCAATCAAGCCCCACTCCCCACCAACCCCCTTCCCTCAATTATAAGCCTACAACTACTGCTGATTGCTTCAGACTGATCCAAGAAAGGGAAGTTTGGTTGTGGTGCAGAGAGGTGCAGAAGGGGGAGGGAGGGCTCTGAATTTTCAAGAAAGGGACCATCTTTCTGCTGCTGCTGCTGTCCGGGTTGGTGCTTGTTGAATTTGAGGCTAAAGAAGTCGGAATTGGAGGTTTTGTAAGAGGGAAACAATGGCTGGCAAGGAAATCTACCACAAGATGAAGGACAAGGTGAAAGATGCTTTTAGTTCGTCAGGACCAGAAACAGGGAAAGGAAAAACAAAATTGTCAGGCAAGCGTGTCAAGCATGGTTACCATCTTGTGAA]
[+] EMBL CB645441             [                                                                                                                       GTTGCCTTGCAAAGAGGTGCATAAGGGGGAGGGAGGGCTCTGAATTTTCAAGAAAGGGACCATCTTTCTGCTGCTGCTGCTGTCCGGGTTGGTGCTTGTTGAATTTGAGGCTAAACAAGTCGGAATTGGAGGTTTTGTAATAGGGAAACAATGGCTGGCAAGGAAATCTACCACCAGATGAAGGACAAGGGGAAAGATGCTTTTACTTCGTCAGGACCAGAAACAGGGAAAGGAAAAACAAAATTGTCAAGCAAGCGTGTCAAGCATGGTTACCATCTTGTGAA]
[+] EMBL C71804               [                                                                                                                                                                                               GCTGCTGCTGTCCGGGTTGGTGCTTGTNGAATTTAAGGCTAAAGAAGTCGGAATTGGAGGTTTTGTAAGAGGGAAACAATGGCTGGCAAGGAAATCTACCACAAGATGAAGGACAAGGTGAAAGATGCTTTTAGTTCGTNAGGACCAGAAACAGGGAAAGGAAAAACAAAATTNTCAGGCAAGCGTGTCAAGCATGGTTACCATCTTGTGAA]




>consensus_4648#0
CCCAAAAGCAGCTCCATCCAAACCCAATCAAGCCCCACTCCCCACCAACCCCCTTCCCTC
AATTATAAGCCTACAACTACTGCTGATTGCTTCAGACTGATCCAAGAAAGGGAAGTTTGG
TTGTGGTGCAGAGAGGTGCAGAAGGGGGAGGGAGGGCTCTGAATTTTCAAGAAAGGGACC
ATCTTTCTGCTGCTGCTGCTGTCCGGGTTGGTGCTTGTTGAATTTGAGGCTAAAGAAGTC
GGAATTGGAGGTTTTGTAAGAGGGAAACAATGGCTGGCAAGGAAATCTACCACAAGATGA
AGGACAAGGTGAAAGATGCTTTTAGTTCGTCAGGACCAGAAACAGGGAAAGGAAAAACAA
AATTGTCAGGCAAGCGTGTCAAGCATGGTTACCATCTTGTGAA

clustalw multiple alignements is not computed in this case