cluster # 4664

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Oryza sativa
cluster # 4664 cluster # 4664 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4664#0 length = 877 sequences # 3

consensusID : consensus_4664#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 877
fasta sequence

                              [CTTTCTTTACAAAGCAAGCAAGCACACTGGACAGAAGGGTAGGCAGCTTAGTGCTGCCAGCTGCTTCAAACGGGGCATTGTTCAATGCTACAATCATGGTCTTCCTCCCAATCTATGACAGAATCTTTATCCCAGTGGCCAGAAGATACACCAAGAACCCTAGCGGTATCACCACGCTGCAGAGGATCGGCGTCGGGTTGGTTCTCTCGATCATCACGATGATCGTTGCTGCAATGGTTGAGATGAGGAGGCTCAGGATAGCAAGAGATTTCGGCCTTGTGGACAAACCTGAAGCTGTTGTTCCTATGAGCTTCTTGTGGATTGTTCCGCAGAACATTCTGGCTGCAATTTCTGATATGTTTGCTGTGATTGGATTGCAAGAGTTCTTCTACGGTGAGGCACCGGAGAGTCTGCGAAGCTTTTCCATGGCTCTGTTCTTGAGCATAATTGGAGTTGGGAACTTCATCAGTAGTTTCATTGTATATGCCATTGACAGGGTGACCAGTAGCTTTGGAGACAGCTGGTTCTCTAACAATCCAAACAGAGGGCATGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGGCCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGGTCA-TCTCAGTGCAGTGACATTGTGTGCAGCCTACATATTTGTAGCTCCACTGATAAGGTCACCTTCACAATCT-GATCCAGTCTCAAGAATGTAACATGGTAAAGCTGTATCTGGTATAATGTAT-GTTCCAGGTTCAC-TTCCTTCATTGATACGTCCTAACTATACTTTGTAAGAAATTATGTGACCCAGCTGCAAATGCAAATGAAATGTTCCTT-AATTTCAAAAAAAAAAA]

[+] EMBL CA765632             [CTTTCTTTACAAAGCAAGCAAGCACACTGGACAGAAGGGTAGGCAGCTTAGTGCTGCCAGCTGCTTCAAACGGGGCATTGTTCAATGCTACAATCATGGTCTTCCTCCCAATCTATGACAGAATCTTTATCCCAGTGGCCAGAAGATACACCAAGAACCCTAGCGGTATCACCACGCTGCAGAGGATCGGCGTCGGGTTGGTTCTCTCGATCATCACGATGATCGTTGCTGCAATGGTTGAGATGAGGAGGCTCAGGATAGCAAGAGATTTCGGCCTTGTGGACAAACCTGAAGCTGTTGTTCCTATGAGCTTCTTGTGGATTGTTCCGCAGAACATTCTGGCTGCAATTTCTGATATGTTTGCTGTGATTGGATTGCAAGAGTTCTTCTACGGTGAGGCACCGGAGAGTCTGCGAAGCTTTTCCATGGCTCTGTTCTTGAGCATAATTGGAGTTGGGAACTTCATCAGTAGTTTCATTGTATATGCCATTGACAGGGTGACCAGTAGCTTTGGAGACAGCTGGTTCTCTAACAATCCAAACAGAGGGCATGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGGCCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGGTCATTCTCAGTGCAGTGACATTGTGTGCAGCCTACATATTTGTAGCTNCACTGATAAGGTCACCTTCACAATCTGGATCCAGTCTCAAGAATGTAACATGGTAAAGCTGNATCTGGTATAAAGGATGGNTCCAGGTTCACTTTCCTT ATTGgat                                                                                  ]
[+] EMBL AK060248             [                                      GTAGGCAGCTTAGTGCTGCCAGCTGCTTCAAACGGGGCATTGTTCAATGCTACAATCATGGTCTTCCTCCCAATCTATGACAGAATCTTTATCCCAGTGGCCAGAAGATACACCAAGAACCCTAGCGGTATCACGACGCTGCAGAGGATCGGCGTCGGGTTGGTTCTCTCGATCATCACGATGATCGTTGCTGCAATGGTTGAGATGAGGAGGCTCAGGATAGCAAGAGGTTTCGGCCTTGTGGACAAACCTGAAGCTGTTGTTCCTATGAGCTTCTTGTGGATTGTTCCGCAGAACATTCTGGCTGCAATTTCTGATATGTTTGCTGTGATTGGATTGCAAGAGTCCTTCTACGGTGAGGCACCGGAGAGTCTGCGAAGCTTTTCCATGGCTCTGTTCTTGAGCATAATTGGAGTTGGGAACTTCATCAGTAGTTTCATTGTATATGCCATTGACAGGGTGACCAGTAGCTTTGGAGACAGCTGGTTCTCTAACAATCCAAACAGAGGGCATGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGGCCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGGTCA TCTCAGTGCAGTGACATTGTGTGCAGCCTACATATTTGTAGCTCCACTGATAAGGTCACCTTCACAATCT GATCCAGTCTCAAGAATGTAACATGGTAAAGCTGTATCTGGTATAATGTAT GTTCCAGTTTCAC TTCCTTCATTGATACGTCCTAACTATACTTTGTAAGAAATTATGTGACCCAGCTGCAAATGCAAATGAAATGTTCCTT AAT              ]
[+] EMBL AU162998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGGCCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGGTCA TCTCAGTGCAGTGACATTGTGTGCAGCCTACATATTTGTAGCTCCACTGATAAGGTCACCTTCACAATCT GATCCAGTCTCAAGAATGTAACATGGTAAAGCTGTATCTGGTATAATGTAT GTTCCA GTTCAC TTCCTTCATTGATACGTCCTAACTATACTTTGTAAGAAATTATGTGACCCAGCTGCAAATGCAAATGAAATGTTCCTTGAATTTCAAAAAAAAAAA]




>consensus_4664#0
CTTTCTTTACAAAGCAAGCAAGCACACTGGACAGAAGGGTAGGCAGCTTAGTGCTGCCAG
CTGCTTCAAACGGGGCATTGTTCAATGCTACAATCATGGTCTTCCTCCCAATCTATGACA
GAATCTTTATCCCAGTGGCCAGAAGATACACCAAGAACCCTAGCGGTATCACCACGCTGC
AGAGGATCGGCGTCGGGTTGGTTCTCTCGATCATCACGATGATCGTTGCTGCAATGGTTG
AGATGAGGAGGCTCAGGATAGCAAGAGATTTCGGCCTTGTGGACAAACCTGAAGCTGTTG
TTCCTATGAGCTTCTTGTGGATTGTTCCGCAGAACATTCTGGCTGCAATTTCTGATATGT
TTGCTGTGATTGGATTGCAAGAGTTCTTCTACGGTGAGGCACCGGAGAGTCTGCGAAGCT
TTTCCATGGCTCTGTTCTTGAGCATAATTGGAGTTGGGAACTTCATCAGTAGTTTCATTG
TATATGCCATTGACAGGGTGACCAGTAGCTTTGGAGACAGCTGGTTCTCTAACAATCCAA
ACAGAGGGCATGTCGATTACTTCTACTTGCTTATTACCGTGCTCAATGCTTTGTCCCTGG
CCTGTTTCTTATACTTTGCTAAAATGTATGAACATAGGAAAAAGGTCATCTCAGTGCAGT
GACATTGTGTGCAGCCTACATATTTGTAGCTCCACTGATAAGGTCACCTTCACAATCTGA
TCCAGTCTCAAGAATGTAACATGGTAAAGCTGTATCTGGTATAATGTATGTTCCAGGTTC
ACTTCCTTCATTGATACGTCCTAACTATACTTTGTAAGAAATTATGTGACCCAGCTGCAA
ATGCAAATGAAATGTTCCTTAATTTCAAAAAAAAAAA

clustalw multiple alignements is not computed in this case