cluster # 4681

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Oryza sativa
cluster # 4681 cluster # 4681 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4681#0 length = 3016 sequences # 1

consensus_4681#1 length = 739 sequences # 2

consensusID : consensus_4681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3016
fasta sequence

                              [CCCCAAACTCAACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCGGCGGCACGGCGGTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTCCACGTGATTCACGGCAACACGAATCAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCTGCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTAAGGTCATTCTCTCTTCTTGATCCCTGCTATAGTTCGTGTATGTTCTTCCGTGGAATGTGCTTGGTTTGAACAATTTGGGGGCTGAGATGAACTAGGGTTTTGATGCCACCAACACTGACAACTGCAGATGAACTAGAGTTAGTATTCCGTCGGTGTTCTTGTAGAGACAGCTACAGCTTCCTCTTCTTGTTGTTCTTCTTGTCCTTCCCTCCACTTGGGCCTGGCCCCTCATCGATTGGCCAACAAAAGGTAGTAATGGTGTCCCTCCATTACTGCTGTTCTGTAAGGTTATGATGAGCTACCCACTGATGTGGAGCAACCGGCGGCGTCTGCAGCTGTTACTGTTGTGTTATTCATCGATGGGAGGATCGTGCGTAGAATTGATGTTGCTGCTGCCGGCCTGCCGTCGTGCTTTATGTTCTCCATTATCTTGCATATTGCATTAGAATGATGGTGAGATGTGGGTCTGGGGTCTGGGGTTCAGTACAAAGTTCGATCAACGGCGTTCATGGGTGCCAGCTTATTTTAGTGACATACCTTTGTCAGGATTGTTAAGGACCACCTCAAGGTCAGAGAGTGCCAATTCATTCTTTTCTCGTCTAATTGGGCGGAAGCTTGCTTTGGTGGAGTTTTGGCTCAGGTTTGATGCTGCACTAGAAGAACAAAGACATAAGGAACTAGAAGAAGATAACATTACGCTCCACACAATCCGCAATTTGAAGACAGAATGGGTGATAGAGAAGCATGCAAGTGAGTTCTTCACACATGAGGTATTTAGCATAATTCAGAAAGAGGTGCTAGCTGCCAGGGACCGTTGCCTTATTGACAATGTGCAACAAGAGGGCTAGGTCAAAATCATTGATATCATTGAAGAATCCAGGAAGCCAAGAGTTGTGCGTTATGATAGACAGACAATGGTTGCAACGTGCACATGTATGCTATTTGAAACTCATGGTATACCATGTCGTCATCTAATTCCAGTCCTAAGAAGTGCCCAGCTAAGTGAACTGCCGAGATACTATTTATTAGAAAGGTTTAGGAAGGACTGCAAGAAGACACATGTGTTCGATGCAGATGGTATCTTGTTGGAAGAAAACACAAGCAACAGTAATGATCCTGTGATGCAAAAAATGCTTTCAGAAGCATGCAACAAAATGGAGAAGCTTATCCTACAAGCTAAGCAATCAGCAGCAGCTATGCAACTTTTGAGGGATGAACTAGTTGTGCTTGGTGATAAATTAAATGAGATGGTTCCTGAAAAAGAGCTTAGCCAAATTGAGGAATTTGAATCATATCTTGGATGTAGCATTCCAAGTCAAATTGAAATCCACCCGCCAAATGACACTCGTTCCAGGGGTCGGATAAAGAGAATTAAAGGGCACAATGACAAGGAGAAAAAGCAAAACAAGAAGATAAAGAAAAAAGAGAGAGTACCACAAAGGTGCAAGAAGTGCAAACAAGTCGTGCTGCACGATTCGCGCAACTGTCCTAACAAAGAACCACAACAGTGATGCAAGGTTCTATACATCATGCTTCCTTAACTATCAGTCATCTTATAATAGTTGTCATACAATTTCCTGGAAGAAGTTAGCGTTTCTCTGTAAAAGATTGTGTGTTGTCATCCAAAATTCAACTAACGGTGTATCGTAAAGTCTATAGTGTGCCAAGAACATTCTGGTTCTAATGGACATACTGTAGATTTCCTTGGAACAAAGTAGCAATTCATGTAAAAGATAATAGGTGGCCATATAATATTTAACTAACAGTAGGTAGTGAACACATGTTGAAATATAATTAGTTGGGACCATTGTGAGGTAATAACATTTTTAGTATTGTCGTCGTGAGTCTAATTAATAATATAAATCGCAAATGTACAATTGTCCTGTTAGCTGATGTGGTCCCTTGCATTTTTGCATGGGTTCTTATTTATAGCTCTTTAAGTTTTTGACTGTATGATTTGGGACCTAGTGTTATCAACTTGGAACAAAGTATAAAAAAATATGGGAAGGATTCGAGGTGGGCAAGTGGGCATGTAATATACAGCGGGATGTGTAGGAAGCACAATCATTTTGGATTGCATTTTCAGTTTGGAATGGTTAAGAATTACATATGGAAAATATTTAAATATATTGCGACAAGTTCGGCTCATATACAAATGTATATTGCGACAAGGACATTTTGGACAGCTAATATTCAGCTTGAAATGGTTAAGAGTACATATGGGAAGACAGGAAAAAAATATTAGAACAACCATTGTGTTCCAGGAACATTTTGTTATCTTAGTTTGGTCCGTAGTGTGAATAAAACTTTGTATGTATCTATGCTCACCAGTATATATGTCCTTAACAATTTTTTATCTATGCTCACAAGTATATATGTCCTTCTTAACAATTTTTTTCACTATGCAGTTTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGTAGTTTTTTGTTCAAAGTAGAGCCACTGCCATCATCCAGTGCACACGTGTGTGATCTATTAATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGATAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTGTGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTGATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAGGAAAATCCTAAATATA]

[+] EMBL AK065977             [CCCCAAACTCAACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCGGCGGCACGGCGGTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTCCACGTGATTCACGGCAACACGAATCAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCTGCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTAAGGTCATTCTCTCTTCTTGATCCCTGCTATAGTTCGTGTATGTTCTTCCGTGGAATGTGCTTGGTTTGAACAATTTGGGGGCTGAGATGAACTAGGGTTTTGATGCCACCAACACTGACAACTGCAGATGAACTAGAGTTAGTATTCCGTCGGTGTTCTTGTAGAGACAGCTACAGCTTCCTCTTCTTGTTGTTCTTCTTGTCCTTCCCTCCACTTGGGCCTGGCCCCTCATCGATTGGCCAACAAAAGGTAGTAATGGTGTCCCTCCATTACTGCTGTTCTGTAAGGTTATGATGAGCTACCCACTGATGTGGAGCAACCGGCGGCGTCTGCAGCTGTTACTGTTGTGTTATTCATCGATGGGAGGATCGTGCGTAGAATTGATGTTGCTGCTGCCGGCCTGCCGTCGTGCTTTATGTTCTCCATTATCTTGCATATTGCATTAGAATGATGGTGAGATGTGGGTCTGGGGTCTGGGGTTCAGTACAAAGTTCGATCAACGGCGTTCATGGGTGCCAGCTTATTTTAGTGACATACCTTTGTCAGGATTGTTAAGGACCACCTCAAGGTCAGAGAGTGCCAATTCATTCTTTTCTCGTCTAATTGGGCGGAAGCTTGCTTTGGTGGAGTTTTGGCTCAGGTTTGATGCTGCACTAGAAGAACAAAGACATAAGGAACTAGAAGAAGATAACATTACGCTCCACACAATCCGCAATTTGAAGACAGAATGGGTGATAGAGAAGCATGCAAGTGAGTTCTTCACACATGAGGTATTTAGCATAATTCAGAAAGAGGTGCTAGCTGCCAGGGACCGTTGCCTTATTGACAATGTGCAACAAGAGGGCTAGGTCAAAATCATTGATATCATTGAAGAATCCAGGAAGCCAAGAGTTGTGCGTTATGATAGACAGACAATGGTTGCAACGTGCACATGTATGCTATTTGAAACTCATGGTATACCATGTCGTCATCTAATTCCAGTCCTAAGAAGTGCCCAGCTAAGTGAACTGCCGAGATACTATTTATTAGAAAGGTTTAGGAAGGACTGCAAGAAGACACATGTGTTCGATGCAGATGGTATCTTGTTGGAAGAAAACACAAGCAACAGTAATGATCCTGTGATGCAAAAAATGCTTTCAGAAGCATGCAACAAAATGGAGAAGCTTATCCTACAAGCTAAGCAATCAGCAGCAGCTATGCAACTTTTGAGGGATGAACTAGTTGTGCTTGGTGATAAATTAAATGAGATGGTTCCTGAAAAAGAGCTTAGCCAAATTGAGGAATTTGAATCATATCTTGGATGTAGCATTCCAAGTCAAATTGAAATCCACCCGCCAAATGACACTCGTTCCAGGGGTCGGATAAAGAGAATTAAAGGGCACAATGACAAGGAGAAAAAGCAAAACAAGAAGATAAAGAAAAAAGAGAGAGTACCACAAAGGTGCAAGAAGTGCAAACAAGTCGTGCTGCACGATTCGCGCAACTGTCCTAACAAAGAACCACAACAGTGATGCAAGGTTCTATACATCATGCTTCCTTAACTATCAGTCATCTTATAATAGTTGTCATACAATTTCCTGGAAGAAGTTAGCGTTTCTCTGTAAAAGATTGTGTGTTGTCATCCAAAATTCAACTAACGGTGTATCGTAAAGTCTATAGTGTGCCAAGAACATTCTGGTTCTAATGGACATACTGTAGATTTCCTTGGAACAAAGTAGCAATTCATGTAAAAGATAATAGGTGGCCATATAATATTTAACTAACAGTAGGTAGTGAACACATGTTGAAATATAATTAGTTGGGACCATTGTGAGGTAATAACATTTTTAGTATTGTCGTCGTGAGTCTAATTAATAATATAAATCGCAAATGTACAATTGTCCTGTTAGCTGATGTGGTCCCTTGCATTTTTGCATGGGTTCTTATTTATAGCTCTTTAAGTTTTTGACTGTATGATTTGGGACCTAGTGTTATCAACTTGGAACAAAGTATAAAAAAATATGGGAAGGATTCGAGGTGGGCAAGTGGGCATGTAATATACAGCGGGATGTGTAGGAAGCACAATCATTTTGGATTGCATTTTCAGTTTGGAATGGTTAAGAATTACATATGGAAAATATTTAAATATATTGCGACAAGTTCGGCTCATATACAAATGTATATTGCGACAAGGACATTTTGGACAGCTAATATTCAGCTTGAAATGGTTAAGAGTACATATGGGAAGACAGGAAAAAAATATTAGAACAACCATTGTGTTCCAGGAACATTTTGTTATCTTAGTTTGGTCCGTAGTGTGAATAAAACTTTGTATGTATCTATGCTCACCAGTATATATGTCCTTAACAATTTTTTATCTATGCTCACAAGTATATATGTCCTTCTTAACAATTTTTTTCACTATGCAGTTTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGTAGTTTTTTGTTCAAAGTAGAGCCACTGCCATCATCCAGTGCACACGTGTGTGATCTATTAATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGATAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTGTGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTGATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAGGAAAATCCTAAATATA]




>consensus_4681#0
CCCCAAACTCAACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCG
GCGGCACGGCGGTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTC
CACGTGATTCACGGCAACACGAATCAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCT
GCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTAAGGTCATTC
TCTCTTCTTGATCCCTGCTATAGTTCGTGTATGTTCTTCCGTGGAATGTGCTTGGTTTGA
ACAATTTGGGGGCTGAGATGAACTAGGGTTTTGATGCCACCAACACTGACAACTGCAGAT
GAACTAGAGTTAGTATTCCGTCGGTGTTCTTGTAGAGACAGCTACAGCTTCCTCTTCTTG
TTGTTCTTCTTGTCCTTCCCTCCACTTGGGCCTGGCCCCTCATCGATTGGCCAACAAAAG
GTAGTAATGGTGTCCCTCCATTACTGCTGTTCTGTAAGGTTATGATGAGCTACCCACTGA
TGTGGAGCAACCGGCGGCGTCTGCAGCTGTTACTGTTGTGTTATTCATCGATGGGAGGAT
CGTGCGTAGAATTGATGTTGCTGCTGCCGGCCTGCCGTCGTGCTTTATGTTCTCCATTAT
CTTGCATATTGCATTAGAATGATGGTGAGATGTGGGTCTGGGGTCTGGGGTTCAGTACAA
AGTTCGATCAACGGCGTTCATGGGTGCCAGCTTATTTTAGTGACATACCTTTGTCAGGAT
TGTTAAGGACCACCTCAAGGTCAGAGAGTGCCAATTCATTCTTTTCTCGTCTAATTGGGC
GGAAGCTTGCTTTGGTGGAGTTTTGGCTCAGGTTTGATGCTGCACTAGAAGAACAAAGAC
ATAAGGAACTAGAAGAAGATAACATTACGCTCCACACAATCCGCAATTTGAAGACAGAAT
GGGTGATAGAGAAGCATGCAAGTGAGTTCTTCACACATGAGGTATTTAGCATAATTCAGA
AAGAGGTGCTAGCTGCCAGGGACCGTTGCCTTATTGACAATGTGCAACAAGAGGGCTAGG
TCAAAATCATTGATATCATTGAAGAATCCAGGAAGCCAAGAGTTGTGCGTTATGATAGAC
AGACAATGGTTGCAACGTGCACATGTATGCTATTTGAAACTCATGGTATACCATGTCGTC
ATCTAATTCCAGTCCTAAGAAGTGCCCAGCTAAGTGAACTGCCGAGATACTATTTATTAG
AAAGGTTTAGGAAGGACTGCAAGAAGACACATGTGTTCGATGCAGATGGTATCTTGTTGG
AAGAAAACACAAGCAACAGTAATGATCCTGTGATGCAAAAAATGCTTTCAGAAGCATGCA
ACAAAATGGAGAAGCTTATCCTACAAGCTAAGCAATCAGCAGCAGCTATGCAACTTTTGA
GGGATGAACTAGTTGTGCTTGGTGATAAATTAAATGAGATGGTTCCTGAAAAAGAGCTTA
GCCAAATTGAGGAATTTGAATCATATCTTGGATGTAGCATTCCAAGTCAAATTGAAATCC
ACCCGCCAAATGACACTCGTTCCAGGGGTCGGATAAAGAGAATTAAAGGGCACAATGACA
AGGAGAAAAAGCAAAACAAGAAGATAAAGAAAAAAGAGAGAGTACCACAAAGGTGCAAGA
AGTGCAAACAAGTCGTGCTGCACGATTCGCGCAACTGTCCTAACAAAGAACCACAACAGT
GATGCAAGGTTCTATACATCATGCTTCCTTAACTATCAGTCATCTTATAATAGTTGTCAT
ACAATTTCCTGGAAGAAGTTAGCGTTTCTCTGTAAAAGATTGTGTGTTGTCATCCAAAAT
TCAACTAACGGTGTATCGTAAAGTCTATAGTGTGCCAAGAACATTCTGGTTCTAATGGAC
ATACTGTAGATTTCCTTGGAACAAAGTAGCAATTCATGTAAAAGATAATAGGTGGCCATA
TAATATTTAACTAACAGTAGGTAGTGAACACATGTTGAAATATAATTAGTTGGGACCATT
GTGAGGTAATAACATTTTTAGTATTGTCGTCGTGAGTCTAATTAATAATATAAATCGCAA
ATGTACAATTGTCCTGTTAGCTGATGTGGTCCCTTGCATTTTTGCATGGGTTCTTATTTA
TAGCTCTTTAAGTTTTTGACTGTATGATTTGGGACCTAGTGTTATCAACTTGGAACAAAG
TATAAAAAAATATGGGAAGGATTCGAGGTGGGCAAGTGGGCATGTAATATACAGCGGGAT
GTGTAGGAAGCACAATCATTTTGGATTGCATTTTCAGTTTGGAATGGTTAAGAATTACAT
ATGGAAAATATTTAAATATATTGCGACAAGTTCGGCTCATATACAAATGTATATTGCGAC
AAGGACATTTTGGACAGCTAATATTCAGCTTGAAATGGTTAAGAGTACATATGGGAAGAC
AGGAAAAAAATATTAGAACAACCATTGTGTTCCAGGAACATTTTGTTATCTTAGTTTGGT
CCGTAGTGTGAATAAAACTTTGTATGTATCTATGCTCACCAGTATATATGTCCTTAACAA
TTTTTTATCTATGCTCACAAGTATATATGTCCTTCTTAACAATTTTTTTCACTATGCAGT
TTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGT
AGTTTTTTGTTCAAAGTAGAGCCACTGCCATCATCCAGTGCACACGTGTGTGATCTATTA
ATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGA
TAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTG
TGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTG
ATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAG
GAAAATCCTAAATATA

consensusID : consensus_4681#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 739
fasta sequence

                              [ACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCGGCGGCACGGCGGTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTCCACGTGATTCACGGCAACACGAAT-CAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCTGCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAA-TTAAGTTTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGTAGTTTTTTGTTCAAAGTAGAGCCACTTCCATCATCCAGTGCACACGTGTGTGATCTATTAATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGATAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTGTGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTGATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAGGAAAATCCTAAATATACTTGAACTGGATAAATTTTCTGTGTGCTGTATTTTTCTACTTGAACTAGTAATTTTCTGCACCTGTGTTCCCACAAACCGGTGTGCTGCATTTGCACACCATGGTCATGAAAGTTTTTCGTGTCTCTATAAAAAAAAANA]

[+] EMBL C74043               [ACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCGGCGGCACGGCGGTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTCCACGTGATTCACGGCAACACGAAT CAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCTGCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAA TTAAGTTTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGTAGTTTTTTGTTCAAAGTAGAGCCACTTCCATCATCCAGTGCACACGTGTGTGATCTATTAATAGATTTTAGCCA                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU029365             [                                                                                           nCAGCAGCGCCACCTTTCCACGTGATTCACGGC ACACGAATCCAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCTGCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTTAAGTTTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGTAGTTTTTTGTTCAAAGTAGAGCCACTGCCATCATCCAGTGCACACGTGTGTGATCTATTAATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGATAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTGTGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTGATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAGGAAAATCCTAAATATACTTGAACTGGATAAATTTTCTGTGTGCTGTATTTTTCTACTTGAACTAGTAATTTTCTGCACCTGTGTTCCCACAAACCGGTGTGCTGCATTTGCACACCATGGTCATGAAAGTTTTTCGTGTCTCTATAAAAAAAAANA]




>consensus_4681#1
ACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCGGCGGCACGGCG
GTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTCCACGTGATTCA
CGGCAACACGAATCAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCTGCGAACGGCGG
CCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTAAGTTTGCTGGGTGCAGGTTT
TTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGTAGTTTTTTGTTCAAAGT
AGAGCCACTTCCATCATCCAGTGCACACGTGTGTGATCTATTAATAGATTTTAGCCATTT
AATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGATAACTAATATTTGTGCA
CAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTGTGGGATCTAAATTGTGT
CAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTGATGGACTAGGTTGACTC
TGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAGGAAAATCCTAAATATAC
TTGAACTGGATAAATTTTCTGTGTGCTGTATTTTTCTACTTGAACTAGTAATTTTCTGCA
CCTGTGTTCCCACAAACCGGTGTGCTGCATTTGCACACCATGGTCATGAAAGTTTTTCGT
GTCTCTATAAAAAAAAANA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4681#0      CCCCAAACTCAACTCTCTGCTGCGGCACGACGGTGGGGTTGGGGGAGGGGTGGTGCGGCG 60
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GCGGCACGGCGGTGGGGTGGGGTGGGGCACCGGCGGTGGTCGGCAGCAGCGCCACCTTTC 120
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      CACGTGATTCACGGCAACACGAATCAACCCCCATGCTGCTCCGGTGACGTCGAGGCATCT 180
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTAAGGTCATTC 240
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TCTCTTCTTGATCCCTGCTATAGTTCGTGTATGTTCTTCCGTGGAATGTGCTTGGTTTGA 300
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ACAATTTGGGGGCTGAGATGAACTAGGGTTTTGATGCCACCAACACTGACAACTGCAGAT 360
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GAACTAGAGTTAGTATTCCGTCGGTGTTCTTGTAGAGACAGCTACAGCTTCCTCTTCTTG 420
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TTGTTCTTCTTGTCCTTCCCTCCACTTGGGCCTGGCCCCTCATCGATTGGCCAACAAAAG 480
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GTAGTAATGGTGTCCCTCCATTACTGCTGTTCTGTAAGGTTATGATGAGCTACCCACTGA 540
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TGTGGAGCAACCGGCGGCGTCTGCAGCTGTTACTGTTGTGTTATTCATCGATGGGAGGAT 600
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      CGTGCGTAGAATTGATGTTGCTGCTGCCGGCCTGCCGTCGTGCTTTATGTTCTCCATTAT 660
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      CTTGCATATTGCATTAGAATGATGGTGAGATGTGGGTCTGGGGTCTGGGGTTCAGTACAA 720
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AGTTCGATCAACGGCGTTCATGGGTGCCAGCTTATTTTAGTGACATACCTTTGTCAGGAT 780
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TGTTAAGGACCACCTCAAGGTCAGAGAGTGCCAATTCATTCTTTTCTCGTCTAATTGGGC 840
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GGAAGCTTGCTTTGGTGGAGTTTTGGCTCAGGTTTGATGCTGCACTAGAAGAACAAAGAC 900
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ATAAGGAACTAGAAGAAGATAACATTACGCTCCACACAATCCGCAATTTGAAGACAGAAT 960
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GGGTGATAGAGAAGCATGCAAGTGAGTTCTTCACACATGAGGTATTTAGCATAATTCAGA 1020
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AAGAGGTGCTAGCTGCCAGGGACCGTTGCCTTATTGACAATGTGCAACAAGAGGGCTAGG 1080
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TCAAAATCATTGATATCATTGAAGAATCCAGGAAGCCAAGAGTTGTGCGTTATGATAGAC 1140
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AGACAATGGTTGCAACGTGCACATGTATGCTATTTGAAACTCATGGTATACCATGTCGTC 1200
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ATCTAATTCCAGTCCTAAGAAGTGCCCAGCTAAGTGAACTGCCGAGATACTATTTATTAG 1260
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AAAGGTTTAGGAAGGACTGCAAGAAGACACATGTGTTCGATGCAGATGGTATCTTGTTGG 1320
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AAGAAAACACAAGCAACAGTAATGATCCTGTGATGCAAAAAATGCTTTCAGAAGCATGCA 1380
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ACAAAATGGAGAAGCTTATCCTACAAGCTAAGCAATCAGCAGCAGCTATGCAACTTTTGA 1440
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GGGATGAACTAGTTGTGCTTGGTGATAAATTAAATGAGATGGTTCCTGAAAAAGAGCTTA 1500
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GCCAAATTGAGGAATTTGAATCATATCTTGGATGTAGCATTCCAAGTCAAATTGAAATCC 1560
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ACCCGCCAAATGACACTCGTTCCAGGGGTCGGATAAAGAGAATTAAAGGGCACAATGACA 1620
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AGGAGAAAAAGCAAAACAAGAAGATAAAGAAAAAAGAGAGAGTACCACAAAGGTGCAAGA 1680
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      AGTGCAAACAAGTCGTGCTGCACGATTCGCGCAACTGTCCTAACAAAGAACCACAACAGT 1740
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GATGCAAGGTTCTATACATCATGCTTCCTTAACTATCAGTCATCTTATAATAGTTGTCAT 1800
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ACAATTTCCTGGAAGAAGTTAGCGTTTCTCTGTAAAAGATTGTGTGTTGTCATCCAAAAT 1860
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TCAACTAACGGTGTATCGTAAAGTCTATAGTGTGCCAAGAACATTCTGGTTCTAATGGAC 1920
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ATACTGTAGATTTCCTTGGAACAAAGTAGCAATTCATGTAAAAGATAATAGGTGGCCATA 1980
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TAATATTTAACTAACAGTAGGTAGTGAACACATGTTGAAATATAATTAGTTGGGACCATT 2040
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GTGAGGTAATAACATTTTTAGTATTGTCGTCGTGAGTCTAATTAATAATATAAATCGCAA 2100
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ATGTACAATTGTCCTGTTAGCTGATGTGGTCCCTTGCATTTTTGCATGGGTTCTTATTTA 2160
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TAGCTCTTTAAGTTTTTGACTGTATGATTTGGGACCTAGTGTTATCAACTTGGAACAAAG 2220
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      TATAAAAAAATATGGGAAGGATTCGAGGTGGGCAAGTGGGCATGTAATATACAGCGGGAT 2280
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      GTGTAGGAAGCACAATCATTTTGGATTGCATTTTCAGTTTGGAATGGTTAAGAATTACAT 2340
consensus_4681#1      ------------------------------------------------------------
                                                                                  

consensus_4681#0      ATGGAAAATATTTAAATATATTGCGACAAGTTCGGCTCATATACAAATGTATATTGCGAC 2400
consensus_4681#1      ---------------------------------------------ACTCTCTGCTGCGGC 15
                                                                   * * * *  **** *

consensus_4681#0      AAGGACATTTTGGACAGCTAATATTCAGCTTGAAATGGTTAAGAGTACATATGGGAAGAC 2460
consensus_4681#1      ACG-ACGGTGGGGTTGGGGGA-----GGGGTGGTGCGGCGGCGG---CACGGCGGTGGGG 66
                      * * **  *  **   *   *      *  **    **    *    **    **  *  

consensus_4681#0      AGGAAAAAAATATTAGAACAACCATTGTGTTCCAGGAACATTTTGTTATCTTAGTTTGGT 2520
consensus_4681#1      TGGGGTGGGGCACCGG--CGGTGGTCG-GCAGCAGCGCCACCTTTCCA-CGTGATTCA-- 120
                       **        *   *  *     * * *   ***   **  **   * * *  **    

consensus_4681#0      CCGTAGTGTGAATAAAACTTTGTATGTATCTATGCTCACCAGTATATATGTCCTTAACAA 2580
consensus_4681#1      CGGCAACACGAATCAACCCCCATGC-------TGCT--CCGGTG---ACGTCG--AGGCA 166
                      * * *    **** ** *    *         ****  ** **    * ***   *   *

consensus_4681#0      TTTTTTATCTATGCTCACAAGTATATATGTCCTTCTTAACAATTTTTTTCACTATGCAGT 2640
consensus_4681#1      TCTGCGAACGGCGGCCTCGATTCGCCGATTGCTCCTCCAGCATCCACTGAATTA---AGT 223
                      * *   * *   *  * * * *       * ** **  *  **    *  * **   ***

consensus_4681#0      TTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGT 2700
consensus_4681#1      TTGCTGGGTGCAGGTTTTTTTTTGCTGAGAGCAGCTGGCGAGAATTCTTTTGCTGAGAGT 283
                      ************************************************************

consensus_4681#0      AGTTTTTTGTTCAAAGTAGAGCCACTGCCATCATCCAGTGCACACGTGTGTGATCTATTA 2760
consensus_4681#1      AGTTTTTTGTTCAAAGTAGAGCCACTTCCATCATCCAGTGCACACGTGTGTGATCTATTA 343
                      ************************** *********************************

consensus_4681#0      ATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGA 2820
consensus_4681#1      ATAGATTTTAGCCATTTAATAGCAAGGTTGCATTTTGATTAGACAACACCTTGAAGGGGA 403
                      ************************************************************

consensus_4681#0      TAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTG 2880
consensus_4681#1      TAACTAATATTTGTGCACAAGTGTTGTAACTTATGAATGTTATTACCTGCCAAAACTCTG 463
                      ************************************************************

consensus_4681#0      TGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTG 2940
consensus_4681#1      TGGGATCTAAATTGTGTCAGCAGAAGACATCTGAATATCAGACCATGTCGGTATACATTG 523
                      ************************************************************

consensus_4681#0      ATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAG 3000
consensus_4681#1      ATGGACTAGGTTGACTCTGCCAATTGTTTGTGGCCACAATCTGGACCTATGATTTTCTAG 583
                      ************************************************************

consensus_4681#0      GAAAATCCTAAATATA-------------------------------------------- 3016
consensus_4681#1      GAAAATCCTAAATATACTTGAACTGGATAAATTTTCTGTGTGCTGTATTTTTCTACTTGA 643
                      ****************                                            

consensus_4681#0      ------------------------------------------------------------
consensus_4681#1      ACTAGTAATTTTCTGCACCTGTGTTCCCACAAACCGGTGTGCTGCATTTGCACACCATGG 703
                                                                                  

consensus_4681#0      ------------------------------------
consensus_4681#1      TCATGAAAGTTTTTCGTGTCTCTATAAAAAAAAANA 739