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Oryza sativa
cluster # 4683 cluster # 4683       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4683#0 length = 909 sequences # 3  

consensusID : consensus_4683#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 909
fasta sequence
                              [CGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGNCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGNCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGC-GGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCAC-GCGGGACAAGCGCGGCGC-GCC-GTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCA-CCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGC-CCGCCTGGTGCCCGCCGA-GGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCAC-GCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGC]

[+] EMBL AU057095             [CGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGNCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGNCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGC GGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCAC GCGGGACAAGCGCGGCGC GCC GTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCA CCCTGGTGTGGCTCTGCTCGGCGCAG ACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACA                                                                                                                                                                                                                                ]
[+] EMBL BI806656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGATCTC CGNTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGCAGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCACAGCNGGACAAGCGCGGCGCAGCCAGTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCACCCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGC CCGCCTGGTGCCCGCCGA GGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCACAGCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGG    ]
[+] EMBL AU162736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCA CCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGCGCCGCCTGGTGCCCGCCGAGGGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCAC GCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGC]


>consensus_4683#0 CGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCA AGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGNCAGATCCTCATCAAT GGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCC TTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGA AGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGN CGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACC CGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGC TGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGA GCGACGAGGCCGTGCAGGCGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGA GCGGGCACGCGGGACAAGCGCGGCGCGCCGTGGTGGCCGCGCCTCTCGACGCCCGGCGAC CTGGCCTCCCTGCTCACCACCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAAC TTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGCCCGCCTGG TGCCCGCCGAGGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCT CTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTC CACGCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGA CCCGGCGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)