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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4684#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4465 fasta sequence
[AGAACAATTAACCAAGAGAGCAAAGAGGAGGAGTAGCCATGGCCGCCGCAGCGATTGGAGGGATGCTTGCCTCGGCCGCCATCAAGGAGACGACGAGAAAGCTGGGTTCCGCCATCGGAGGTGAGATCAAGCTGCACAGGGACTTCAGGAGGGACCTGGAGTGCTTCAGGAACACCCTGGAATCAATCGAAGCGGTGATGGAGGACGCGGAGAAGAGGTCCATCAAGGAGAAAACGGTGCAGCTGTGGCTGAATCGGCTCAAGAACGCCTCCTATGACATCTGCGACATGCTCGAGGAGTTTGAGGCCAAAACTGCTACACCAGCTGCACGAATGCTGTCACGTAAGCTCTTCCATCACCCCAAAATTACCAAGTTTACCATGGTTCATAAGATGAAGGAGTTGAGACTAGAACTGAAGGATATTACAGATCAGTATCATAATTTTGGATTCAAGCAAGGCTCTACCTTCAGTGAGCAGCATGTTCCAGATAAACGGGAAACATCACCCAAGGAGTACGAAGCATTCATCGTAGGGCGTACTGAACAGAAGAATTTTATATTGTCTTGTTTGTTTGACAATATCAAGGACAAGATAATAATACTTCCTATATATGGCATTGGAGGTATAGGCAAGACAACCTTTGCGAAAATGGTTTTCAATGATACCCGACTCAATGATTATTCAAAAGTATGGGTCTATGTGTCCCAGGCATTTGACTTAAATAAAATTCGCAGTTCTATAATGTCAAAACTATCAAAAGAGGAGAGTCAATTGAGTAATCAGACGAACCCTGCAGAGCCATTTGGTGACAAGAAAATTATGGTTGTTTTAGATGACCTGTGGGAGATTGATCAATCTGAATTAGACAGGTTGAGGGCTATATTGGTAAATGATGTTGGCATTGGCAGTAAGGTGATTGTCGTTGTAACCACCCGTGAGAAAGAAATTGCAAACAAGTTTTGTACTGTTGCGCCGTTCGAGCTTCCACCCTTGACTGATGATATGTGCTGGACAATAATCAAACAGAAGGTTGAGTTTGATACTAGACCTGACAAAGATCAGCTGGAGCAGGTTGGAAGAGAGATTGCATTGAAGTGTGGAGGTGTGGCGTTAGCAGCTCAAGCACTAGGGTACATGTTGAGATCCATGACAGTCAACAGATGGAACACAGTGAAAAACAGTGATATCTGGAATGAAAACAATTCGGAAGATAGATCCAACCAGCATCACAATGTTATGGCATCCTTGATGTTAAGCTGCAATAACATGTCTCCATATTTGAGGTTATGCTTTGCCTATTGTGCACTATTTGCGAAAGGTCAAAAGATAGTCAAAGATGATCTGGTTTACCAATGGATTTCTCTTGGTTTTGTTGAAAAACAAGGCATATTCTCCATTTGGGAGGATGGTGAGAATTATGTTTGTCATCTTATGGGGATGTCCTTCCTTCAATATTCAAAGTCACCTTCGATTGTTCAAGTGCATCAAGAGGATGTTACATTGCTGACCATGCATGACCTGGTGCATGACTTAGCAAGATATGTCATGGTCGACGAAATTTTAGATGCTAGCAAACAAGGCAATATTACTGGGAGGTGCAGATGCCGCTTTGCGCTGCTCAATGATTGTACCAAGCCATTGAATTCACTCACTCATTCTCCTACCCAGGTAAGGGCGGTGCGTTATCTGGAAAATGAAGAAAATGTGCTCCGAGATGCTTCTTTTTCATCTGCTAAATACATGCGCGTCTTGGATTTAAGCGGGTGCTCCATACAGAAGTTGCCAGATTCCATTGGTCACTTGAAGCAATTGAGATATCTTAAAGCTCTTGGGATCAAGGATAAAATGATCCCTAATTGTATAACTAAGCTCTCAAAATTAATTTTCCTCAGCATTTCTGGGTCTTCGGCAATCTTGACACTGCCAAAGTCAATTGGAGAAATGGAGAGTCTGATGTACATTGACTTGTCAGGTTGTTCTGGATTGAAAGAACTGCCAGAGTCATTTGGCAAACTAAAAAAATTGATTCATCTGGATTTATCAAATTGTTCTAATGTTACTGGTGTATCAGAATCCTTGGAGAGTCTCATCAATCTCAAATATTTGAATTTATCATACTGCCGGAATATTGGACAACTACCTGAAGTTATGGGTAACCTCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAACAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTTATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGTCAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACAACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACTGTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTAGTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTGACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGCAACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTAACTTGCAGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAACTGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGTTAAGAGGTCTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTCGGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATCTCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCACTTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAATCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAGAAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGAGCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGCTTACACCATGTCCGCCTAGAGCTAAGAAGTGGACTATTGTGAGAAGTGATGGCATCATATCCTCATGGGCAGGAAATGCACCACACACTAGTACATCCTGCTCCACTCCTCTGGTATCTTCTTTAGTGGTCCAACAATGCGATTCTCCTCTGCGTGAGTGGAGGTTGCTTCATCACCTCCCTGCCCTCAATTATTTAAAGATCCAGTATTTCGGTGATCCTACGATCTCAGCAGAGATTATTGGAGCCCTCTCCACCCTCCAATCACTGGCTCTGGAAGGCATCTATAGCCATCAGCCACAACTGCCAGATTGGTTGGGTCATCTCAGGTCTCTCAAGGAATTGAAGATAAAGTTCTTTGAGGTGAAAGCAACACATGAGAACATCACGCGTCTCACTTCGCTACATAAACTAAGTCTTTCCCGTTGTGATAGCTTGACATCATTACCGCTGTGGGTGGGAGACCTCGTCTCTCTCCAGGAATTGAGCATCTCAGATTGTCCAAACCTGAATGATTTGGGAGATTGCATGGGACGCCTCACCTCTCTCAAGAGACTTGAGATCAAGGGTTGTTATGAAATCAAGTCTTTGCCTGAGGGCATAAAAAAACTCACCATGCTCGAATATATGTTAATTTTTCACTGCCGTGAATTAAGGGAGTGGTGCGAATTAGAGGATAACAAGAAGACGCTTGCTCATGTCAAACAAATCAAATTGCGTTAATTAGCAAGCCATAAACTCATACAGCATAGAAGTTCACTCCAGGCTGCAAAAATCAAAGGCCTTGATTAATGGAGATTGAGATCATAGAAGTTCACTCCAGGATGAATGAAGCTGTCATATTCAGCAGAGTTTTTTGTCAGGTCGTCGTCCATCGTCCTCGACTTCTGTTACGGTTTTATTCAGGGAAATTTACACTTGAATATAATCAGTATGGGCCGTCAATCCATCCGTATCCTGCTGCATCCCTTCGCGACGGACCTTCAGTGATGAAAGCGTATTTTGCTATTTTCTGCCAGGAATTTAAGTTCATAGTTAAGAGAAGATTCAATTTTGTTACATAATGCTAGGTCTAAAATGTTAGATTCCACATCTTGTGGTATAAGTTTTTATCCCCAAATTCTTCATCATGTTTTAACTTCTATTCTCTACAAAATTCTATGCATGTGTTCTATGTAACACATCCTTCATAATTGGTCCTTGACCACTTAATTTAGAATATATAT]
[+] EMBL AK065649 [AGAACAATTAACCAAGAGAGCAAAGAGGAGGAGTAGCCATGGCCGCCGCAGCGATTGGAGGGATGCTTGCCTCGGCCGCCATCAAGGAGACGACGAGAAAGCTGGGTTCCGCCATCGGAGGTGAGATCAAGCTGCACAGGGACTTCAGGAGGGACCTGGAGTGCTTCAGGAACACCCTGGAATCAATCGAAGCGGTGATGGAGGACGCGGAGAAGAGGTCCATCAAGGAGAAAACGGTGCAGCTGTGGCTGAATCGGCTCAAGAACGCCTCCTATGACATCTGCGACATGCTCGAGGAGTTTGAGGCCAAAACTGCTACACCAGCTGCACGAATGCTGTCACGTAAGCTCTTCCATCACCCCAAAATTACCAAGTTTACCATGGTTCATAAGATGAAGGAGTTGAGACTAGAACTGAAGGATATTACAGATCAGTATCATAATTTTGGATTCAAGCAAGGCTCTACCTTCAGTGAGCAGCATGTTCCAGATAAACGGGAAACATCACCCAAGGAGTACGAAGCATTCATCGTAGGGCGTACTGAACAGAAGAATTTTATATTGTCTTGTTTGTTTGACAATATCAAGGACAAGATAATAATACTTCCTATATATGGCATTGGAGGTATAGGCAAGACAACCTTTGCGAAAATGGTTTTCAATGATACCCGACTCAATGATTATTCAAAAGTATGGGTCTATGTGTCCCAGGCATTTGACTTAAATAAAATTCGCAGTTCTATAATGTCAAAACTATCAAAAGAGGAGAGTCAATTGAGTAATCAGACGAACCCTGCAGAGCCATTTGGTGACAAGAAAATTATGGTTGTTTTAGATGACCTGTGGGAGATTGATCAATCTGAATTAGACAGGTTGAGGGCTATATTGGTAAATGATGTTGGCATTGGCAGTAAGGTGATTGTCGTTGTAACCACCCGTGAGAAAGAAATTGCAAACAAGTTTTGTACTGTTGCGCCGTTCGAGCTTCCACCCTTGACTGATGATATGTGCTGGACAATAATCAAACAGAAGGTTGAGTTTGATACTAGACCTGACAAAGATCAGCTGGAGCAGGTTGGAAGAGAGATTGCATTGAAGTGTGGAGGTGTGGCGTTAGCAGCTCAAGCACTAGGGTACATGTTGAGATCCATGACAGTCAACAGATGGAACACAGTGAAAAACAGTGATATCTGGAATGAAAACAATTCGGAAGATAGATCCAACCAGCATCACAATGTTATGGCATCCTTGATGTTAAGCTGCAATAACATGTCTCCATATTTGAGGTTATGCTTTGCCTATTGTGCACTATTTGCGAAAGGTCAAAAGATAGTCAAAGATGATCTGGTTTACCAATGGATTTCTCTTGGTTTTGTTGAAAAACAAGGCATATTCTCCATTTGGGAGGATGGTGAGAATTATGTTTGTCATCTTATGGGGATGTCCTTCCTTCAATATTCAAAGTCACCTTCGATTGTTCAAGTGCATCAAGAGGATGTTACATTGCTGACCATGCATGACCTGGTGCATGACTTAGCAAGATATGTCATGGTCGACGAAATTTTAGATGCTAGCAAACAAGGCAATATTACTGGGAGGTGCAGATGCCGCTTTGCGCTGCTCAATGATTGTACCAAGCCATTGAATTCACTCACTCATTCTCCTACCCAGGTAAGGGCGGTGCGTTATCTGGAAAATGAAGAAAATGTGCTCCGAGATGCTTCTTTTTCATCTGCTAAATACATGCGCGTCTTGGATTTAAGCGGGTGCTCCATACAGAAGTTGCCAGATTCCATTGGTCACTTGAAGCAATTGAGATATCTTAAAGCTCTTGGGATCAAGGATAAAATGATCCCTAATTGTATAACTAAGCTCTCAAAATTAATTTTCCTCAGCATTTCTGGGTCTTCGGCAATCTTGACACTGCCAAAGTCAATTGGAGAAATGGAGAGTCTGATGTACATTGACTTGTCAGGTTGTTCTGGATTGAAAGAACTGCCAGAGTCATTTGGCAAACTAAAAAAATTGATTCATCTGGATTTATCAAATTGTTCTAATGTTACTGGTGTATCAGAATCCTTGGAGAGTCTCATCAATCTCAAATATTTGAATTTATCATACTGCCGGAATATTGGACAACTACCTGAAGTTATGGGTAACCTCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAACAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTTATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGTCAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACAACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACTGTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTAGTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTGACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGCAACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTAACTTGCAGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAACTGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGTTAAGAGGTCTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTCGGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATCTCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCACTTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAATCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAGAAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGAGCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGCTTACACCATGTCCGCCTAGAGCTAAGAAGTGGACTATTGTGAGAAGTGATGGCATCATATCCTCATGGGCAGGAAATGCACCACACACTAGTACATCCTGCTCCACTCCTCTGGTATCTTCTTTAGTGGTCCAACAATGCGATTCTCCTCTGCGTGAGTGGAGGTTGCTTCATCACCTCCCTGCCCTCAATTATTTAAAGATCCAGTATTTCGGTGATCCTACGATCTCAGCAGAGATTATTGGAGCCCTCTCCACCCTCCAATCACTGGCTCTGGAAGGCATCTATAGCCATCAGCCACAACTGCCAGATTGGTTGGGTCATCTCAGGTCTCTCAAGGAATTGAAGATAAAGTTCTTTGAGGTGAAAGCAACACATGAGAACATCACGCGTCTCACTTCGCTACATAAACTAAGTCTTTCCCGTTGTGATAGCTTGACATCATTACCGCTGTGGGTGGGAGACCTCGTCTCTCTCCAGGAATTGAGCATCTCAGATTGTCCAAACCTGAATGATTTGGGAGATTGCATGGGACGCCTCACCTCTCTCAAGAGACTTGAGATCAAGGGTTGTTATGAAATCAAGTCTTTGCCTGAGGGCATAAAAAAACTCACCATGCTCGAATATATGTTAATTTTTCACTGCCGTGAATTAAGGGAGTGGTGCGAATTAGAGGATAACAAGAAGACGCTTGCTCATGTCAAACAAATCAAATTGCGTTAATTAGCAAGCCATAAACTCATACAGCATAGAAGTTCACTCCAGGCTGCAAAAATCAAAGGCCTTGATTAATGGAGATTGAGATCATAGAAGTTCACTCCAGGATGAATGAAGCTGTCATATTCAGCAGAGTTTTTTGTCAGGTCGTCGTCCATCGTCCTCGACTTCTGTTACGGTTTTATTCAGGGAAATTTACACTTGAATATAATCAGTATGGGCCGTCAATCCATCCGTATCCTGCTGCATCCCTTCGCGACGGACCTTCAGTGATGAAAGCGTATTTTGCTATTTTCTGCCAGGAATTTAAGTTCATAGTTAAGAGAAGATTCAATTTTGTTACATAATGCTAGGTCTAAAATGTTAGATTCCACATCTTGTGGTATAAGTTTTTATCCCCAAATTCTTCATCATGTTTTAACTTCTATTCTCTACAAAATTCTATGCATGTGTTCTATGTAACACATCCTTCATAATTGGTCCTTGACCACTTAATTTAGAATATATAT]
[-] EMBL AK059126 [ TCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAACAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTTATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGTCAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACAACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACTGTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTAGTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTGACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGCAACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTAACTTGCAGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAACTGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGCTAAGAGGTCTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTCGGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATCTCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCACTTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAATCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAGAAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGAGCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGCTTACACCATGTCCGCCTAGAGCTAAGAAGTGGACTATTGTGAGAAGTGATGGCATCATATCCTCATGGGCAGGAAATGCACCACACACTAGTACATCCTGCTCCACTCCTCTGGTATCTTCTTTAGTGGTCCAACAATGCGATTCTCCTCTGCGTGA ]
consensusID : consensus_4684#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1795 fasta sequence
[AGTTCTTCTGTTGCAGATTGTTCAAGTGCATCAAGAGGATGTTACATTGCTGACCATGCATGACCTGGTGCATGACTTAGCAAGATATGTCATGGTCGACGAAATTTTAGATGCTAGCAAACAAGGCAATATTACTGGGAGGTGCAGATGCCGCTTTGCGCTGCTCAATGATTGTACCAAGCCATTGAATTCACTCACTCATTCTCCTACCCAGGTAAGGGCGGTGCGTTATCTGGAAAATGAAGAAAATGTGCTCCGAGATGCTTCTTTTTCATCTGCTAAATACATGCGCGTCTTGGATTTAAGCGGGTGCTCCATACAGAAGTTGCCAGATTCCATTGGTCACTTGAAGCAATTGAGATATCTTAAAGCTCTTGGGATCAAGGATAAAATGATCCCTAATTGTATAACTAAGCTCTCAAAATTAATTTTCCTCAGCATTTCTGGGTCTTCGGCAATCTTGACACTGCCAAAGTCAATTGGAGAAATGGAGAGTCTGATGTACATTGACTTGTCAGGTTGTTCTGGATTGAAAGAACTGCCAGAGTCATTTGGCAAACTAAAAAAATTGATTCATCTGGATTTATCAAATTGTTCTAATGTTACTGGTGTATCAGAATCCTTGGAGAGTCTCATCAATCTCAAATATTTGAATTTATCATACTGCCGGAATATTGGACAACTACCTGAAGTTATGGGTAACCTCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAACAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTTATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGTCAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACAACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACTGTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTAGTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTGACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGCAACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTAACTTGCTGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAACTGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGTTAAGAGGTCTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTCGGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATCTCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCACTTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAATCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAGAAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGAGCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGCTTACACCATGT]
[-] EMBL AK072173 [AGTTCTTCTGTTGCAGATTGTTCAAGTGCATCAAGAGGATGTTACATTGCTGACCATGCATGACCTGGTGCATGACTTAGCAAGATATGTCATGGTCGACGAAATTTTAGATGCTAGCAAACAAGGCAATATTACTGGGAGGTGCAGATGCCGCTTTGCGCTGCTCAATGATTGTACCAAGCCATTGAATTCACTCACTCATTCTCCTACCCAGGTAAGGGCGGTGCGTTATCTGGAAAATGAAGAAAATGTGCTCCGAGATGCTTCTTTTTCATCTGCTAAATACATGCGCGTCTTGGATTTAAGCGGGTGCTCCATACAGAAGTTGCCAGATTCCATTGGTCACTTGAAGCAATTGAGATATCTTAAAGCTCTTGGGATCAAGGATAAAATGATCCCTAATTGTATAACTAAGCTCTCAAAATTAATTTTCCTCAGCATTTCTGGGTCTTCGGCAATCTTGACACTGCCAAAGTCAATTGGAGAAATGGAGAGTCTGATGTACATTGACTTGTCAGGTTGTTCTGGATTGAAAGAACTGCCAGAGTCATTTGGCAAACTAAAAAAATTGATTCATCTGGATTTATCAAATTGTTCTAATGTTACTGGTGTATCAGAATCCTTGGAGAGTCTCATCAATCTCAAATATTTGAATTTATCATACTGCCGGAATATTGGACAACTACCTGAAGTTATGGGTAACCTCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAACAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTTATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGTCAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACAACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACTGTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTAGTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTGACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGCAACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTAACTTGCTGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAACTGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGTTAAGAGGTCTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTCGGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATCTCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCACTTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAATCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAGAAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGAGCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGCTTACACCATGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4684#0 AGAACAATTAACCAAGAGAGCAAAGAGGAGGAGTAGCCATGGCCGCCGCAGCGATTGGAG 60
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GGATGCTTGCCTCGGCCGCCATCAAGGAGACGACGAGAAAGCTGGGTTCCGCCATCGGAG 120
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GTGAGATCAAGCTGCACAGGGACTTCAGGAGGGACCTGGAGTGCTTCAGGAACACCCTGG 180
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AATCAATCGAAGCGGTGATGGAGGACGCGGAGAAGAGGTCCATCAAGGAGAAAACGGTGC 240
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AGCTGTGGCTGAATCGGCTCAAGAACGCCTCCTATGACATCTGCGACATGCTCGAGGAGT 300
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TTGAGGCCAAAACTGCTACACCAGCTGCACGAATGCTGTCACGTAAGCTCTTCCATCACC 360
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CCAAAATTACCAAGTTTACCATGGTTCATAAGATGAAGGAGTTGAGACTAGAACTGAAGG 420
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ATATTACAGATCAGTATCATAATTTTGGATTCAAGCAAGGCTCTACCTTCAGTGAGCAGC 480
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ATGTTCCAGATAAACGGGAAACATCACCCAAGGAGTACGAAGCATTCATCGTAGGGCGTA 540
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CTGAACAGAAGAATTTTATATTGTCTTGTTTGTTTGACAATATCAAGGACAAGATAATAA 600
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TACTTCCTATATATGGCATTGGAGGTATAGGCAAGACAACCTTTGCGAAAATGGTTTTCA 660
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ATGATACCCGACTCAATGATTATTCAAAAGTATGGGTCTATGTGTCCCAGGCATTTGACT 720
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TAAATAAAATTCGCAGTTCTATAATGTCAAAACTATCAAAAGAGGAGAGTCAATTGAGTA 780
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ATCAGACGAACCCTGCAGAGCCATTTGGTGACAAGAAAATTATGGTTGTTTTAGATGACC 840
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TGTGGGAGATTGATCAATCTGAATTAGACAGGTTGAGGGCTATATTGGTAAATGATGTTG 900
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GCATTGGCAGTAAGGTGATTGTCGTTGTAACCACCCGTGAGAAAGAAATTGCAAACAAGT 960
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TTTGTACTGTTGCGCCGTTCGAGCTTCCACCCTTGACTGATGATATGTGCTGGACAATAA 1020
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TCAAACAGAAGGTTGAGTTTGATACTAGACCTGACAAAGATCAGCTGGAGCAGGTTGGAA 1080
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GAGAGATTGCATTGAAGTGTGGAGGTGTGGCGTTAGCAGCTCAAGCACTAGGGTACATGT 1140
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TGAGATCCATGACAGTCAACAGATGGAACACAGTGAAAAACAGTGATATCTGGAATGAAA 1200
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ACAATTCGGAAGATAGATCCAACCAGCATCACAATGTTATGGCATCCTTGATGTTAAGCT 1260
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GCAATAACATGTCTCCATATTTGAGGTTATGCTTTGCCTATTGTGCACTATTTGCGAAAG 1320
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GTCAAAAGATAGTCAAAGATGATCTGGTTTACCAATGGATTTCTCTTGGTTTTGTTGAAA 1380
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AACAAGGCATATTCTCCATTTGGGAGGATGGTGAGAATTATGTTTGTCATCTTATGGGGA 1440
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TGTCCTTCCTTCAATATTCAAAGTCACCTTCGATTGTTCAAGTGCATCAAGAGGATGTTA 1500
consensus_4684#1 ------------AGTTCTT----CTGTTGCAGATTGTTCAAGTGCATCAAGAGGATGTTA 44
* * * *****************************
consensus_4684#0 CATTGCTGACCATGCATGACCTGGTGCATGACTTAGCAAGATATGTCATGGTCGACGAAA 1560
consensus_4684#1 CATTGCTGACCATGCATGACCTGGTGCATGACTTAGCAAGATATGTCATGGTCGACGAAA 104
************************************************************
consensus_4684#0 TTTTAGATGCTAGCAAACAAGGCAATATTACTGGGAGGTGCAGATGCCGCTTTGCGCTGC 1620
consensus_4684#1 TTTTAGATGCTAGCAAACAAGGCAATATTACTGGGAGGTGCAGATGCCGCTTTGCGCTGC 164
************************************************************
consensus_4684#0 TCAATGATTGTACCAAGCCATTGAATTCACTCACTCATTCTCCTACCCAGGTAAGGGCGG 1680
consensus_4684#1 TCAATGATTGTACCAAGCCATTGAATTCACTCACTCATTCTCCTACCCAGGTAAGGGCGG 224
************************************************************
consensus_4684#0 TGCGTTATCTGGAAAATGAAGAAAATGTGCTCCGAGATGCTTCTTTTTCATCTGCTAAAT 1740
consensus_4684#1 TGCGTTATCTGGAAAATGAAGAAAATGTGCTCCGAGATGCTTCTTTTTCATCTGCTAAAT 284
************************************************************
consensus_4684#0 ACATGCGCGTCTTGGATTTAAGCGGGTGCTCCATACAGAAGTTGCCAGATTCCATTGGTC 1800
consensus_4684#1 ACATGCGCGTCTTGGATTTAAGCGGGTGCTCCATACAGAAGTTGCCAGATTCCATTGGTC 344
************************************************************
consensus_4684#0 ACTTGAAGCAATTGAGATATCTTAAAGCTCTTGGGATCAAGGATAAAATGATCCCTAATT 1860
consensus_4684#1 ACTTGAAGCAATTGAGATATCTTAAAGCTCTTGGGATCAAGGATAAAATGATCCCTAATT 404
************************************************************
consensus_4684#0 GTATAACTAAGCTCTCAAAATTAATTTTCCTCAGCATTTCTGGGTCTTCGGCAATCTTGA 1920
consensus_4684#1 GTATAACTAAGCTCTCAAAATTAATTTTCCTCAGCATTTCTGGGTCTTCGGCAATCTTGA 464
************************************************************
consensus_4684#0 CACTGCCAAAGTCAATTGGAGAAATGGAGAGTCTGATGTACATTGACTTGTCAGGTTGTT 1980
consensus_4684#1 CACTGCCAAAGTCAATTGGAGAAATGGAGAGTCTGATGTACATTGACTTGTCAGGTTGTT 524
************************************************************
consensus_4684#0 CTGGATTGAAAGAACTGCCAGAGTCATTTGGCAAACTAAAAAAATTGATTCATCTGGATT 2040
consensus_4684#1 CTGGATTGAAAGAACTGCCAGAGTCATTTGGCAAACTAAAAAAATTGATTCATCTGGATT 584
************************************************************
consensus_4684#0 TATCAAATTGTTCTAATGTTACTGGTGTATCAGAATCCTTGGAGAGTCTCATCAATCTCA 2100
consensus_4684#1 TATCAAATTGTTCTAATGTTACTGGTGTATCAGAATCCTTGGAGAGTCTCATCAATCTCA 644
************************************************************
consensus_4684#0 AATATTTGAATTTATCATACTGCCGGAATATTGGACAACTACCTGAAGTTATGGGTAACC 2160
consensus_4684#1 AATATTTGAATTTATCATACTGCCGGAATATTGGACAACTACCTGAAGTTATGGGTAACC 704
************************************************************
consensus_4684#0 TCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAA 2220
consensus_4684#1 TCTCGAAACTGGTATATTTGAACTTATCAAGTTGCTCCTATATGAAAGGGAGGTTAGAAA 764
************************************************************
consensus_4684#0 CAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTT 2280
consensus_4684#1 CAGAAGTTTTGGGTACCCTCACCAAACTTGAATACTTGAATCTGTCTACAGAACACTTTT 824
************************************************************
consensus_4684#0 ATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGT 2340
consensus_4684#1 ATACGGAAAGGCTAGCTCAAGGTTTGAACAGCTTAATCAATCTCAAGTATTTGAACTTGT 884
************************************************************
consensus_4684#0 CAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACA 2400
consensus_4684#1 CAGGCTCGCTGAATTACTTGGGTTCTTCAATAGATATCAGTTTCCTCGGTTGTCTGAACA 944
************************************************************
consensus_4684#0 ACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACT 2460
consensus_4684#1 ACCTAGAGCATTTGGTCTTGTCGAAGAACATATATCTTAATGGCGTCGTCTTACCTGACT 1004
************************************************************
consensus_4684#0 GTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTA 2520
consensus_4684#1 GTTTTGATACACTCAAAAAGCTACATACACTTGACCTCTCGGATTGCCCACTTTTGAGTA 1064
************************************************************
consensus_4684#0 GTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTG 2580
consensus_4684#1 GTTTACCAGCAAGTATAGGTAAAGCTGACAGCCTGAAGTTTGTTAATCTGAATGGTAGTG 1124
************************************************************
consensus_4684#0 ACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGC 2640
consensus_4684#1 ACCTGTCCAAGGTGCCACAATGGAACAAAAATTTACTCACATTACCACGCTTTGTGGTGC 1184
************************************************************
consensus_4684#0 AACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTA 2700
consensus_4684#1 AACCTAATGATGATGGATCTTCTAGCAACCTTGTTCTGCTTAATGATGTGAATCCTCCTA 1244
************************************************************
consensus_4684#0 ACTTGCAGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAAC 2760
consensus_4684#1 ACTTGCTGATAAGATGTCTTGAAAATGTGAGGTCGGTCAAAGAGGTCCAGAAGATAGAAC 1304
****** *****************************************************
consensus_4684#0 TGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGTTAAGAGGT 2820
consensus_4684#1 TGATTGAAAAGCAAAGAATCAAAGAGTTGGAATTGCATTGGACTCAACATGTTAAGAGGT 1364
************************************************************
consensus_4684#0 CTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTC 2880
consensus_4684#1 CTATGGAGGACATAGATTTGTTGCGTGAGCTAGTTCCTCCAAGATCTCTAAAGAAGTTTC 1424
************************************************************
consensus_4684#0 GGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATC 2940
consensus_4684#1 GGATGGAAGGTTATAAAGACACCAAATATCCATCCTGGTTAATGGACATTTCCCTTTATC 1484
************************************************************
consensus_4684#0 TCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCAC 3000
consensus_4684#1 TCCCTAATCTTATTCAAATTACCATGGCACAAATGCCCAAGTGCGTCAGGCTACCACCAC 1544
************************************************************
consensus_4684#0 TTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAA 3060
consensus_4684#1 TTGGCCAATTACCTAATCTGGAAGAGTTGTGTCTTGAAAGAATGAAGAGCGTGGTGAAAA 1604
************************************************************
consensus_4684#0 TCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAG 3120
consensus_4684#1 TCGATGAGGATTTTTGTGGCGGCCCAGGGCCATTTCCTCGACTGAAGAAGTTTACCATAG 1664
************************************************************
consensus_4684#0 AAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGA 3180
consensus_4684#1 AAGGCATGCCAAGCCTAGAAGTGTGGAACACAATGTACTCTTGCGATGAGGATAGTGTGA 1724
************************************************************
consensus_4684#0 GCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGC 3240
consensus_4684#1 GCGAGTTTATGTTTCCTAACCTTTGTGAATTGGAAATCTCCAATTGCCCCAAACTGCAGC 1784
************************************************************
consensus_4684#0 TTACACCATGTCCGCCTAGAGCTAAGAAGTGGACTATTGTGAGAAGTGATGGCATCATAT 3300
consensus_4684#1 TTACACCATGT------------------------------------------------- 1795
***********
consensus_4684#0 CCTCATGGGCAGGAAATGCACCACACACTAGTACATCCTGCTCCACTCCTCTGGTATCTT 3360
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CTTTAGTGGTCCAACAATGCGATTCTCCTCTGCGTGAGTGGAGGTTGCTTCATCACCTCC 3420
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CTGCCCTCAATTATTTAAAGATCCAGTATTTCGGTGATCCTACGATCTCAGCAGAGATTA 3480
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TTGGAGCCCTCTCCACCCTCCAATCACTGGCTCTGGAAGGCATCTATAGCCATCAGCCAC 3540
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AACTGCCAGATTGGTTGGGTCATCTCAGGTCTCTCAAGGAATTGAAGATAAAGTTCTTTG 3600
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AGGTGAAAGCAACACATGAGAACATCACGCGTCTCACTTCGCTACATAAACTAAGTCTTT 3660
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CCCGTTGTGATAGCTTGACATCATTACCGCTGTGGGTGGGAGACCTCGTCTCTCTCCAGG 3720
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AATTGAGCATCTCAGATTGTCCAAACCTGAATGATTTGGGAGATTGCATGGGACGCCTCA 3780
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CCTCTCTCAAGAGACTTGAGATCAAGGGTTGTTATGAAATCAAGTCTTTGCCTGAGGGCA 3840
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TAAAAAAACTCACCATGCTCGAATATATGTTAATTTTTCACTGCCGTGAATTAAGGGAGT 3900
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GGTGCGAATTAGAGGATAACAAGAAGACGCTTGCTCATGTCAAACAAATCAAATTGCGTT 3960
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 AATTAGCAAGCCATAAACTCATACAGCATAGAAGTTCACTCCAGGCTGCAAAAATCAAAG 4020
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 GCCTTGATTAATGGAGATTGAGATCATAGAAGTTCACTCCAGGATGAATGAAGCTGTCAT 4080
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ATTCAGCAGAGTTTTTTGTCAGGTCGTCGTCCATCGTCCTCGACTTCTGTTACGGTTTTA 4140
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TTCAGGGAAATTTACACTTGAATATAATCAGTATGGGCCGTCAATCCATCCGTATCCTGC 4200
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TGCATCCCTTCGCGACGGACCTTCAGTGATGAAAGCGTATTTTGCTATTTTCTGCCAGGA 4260
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 ATTTAAGTTCATAGTTAAGAGAAGATTCAATTTTGTTACATAATGCTAGGTCTAAAATGT 4320
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TAGATTCCACATCTTGTGGTATAAGTTTTTATCCCCAAATTCTTCATCATGTTTTAACTT 4380
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 CTATTCTCTACAAAATTCTATGCATGTGTTCTATGTAACACATCCTTCATAATTGGTCCT 4440
consensus_4684#1 ------------------------------------------------------------
consensus_4684#0 TGACCACTTAATTTAGAATATATAT 4465
consensus_4684#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||