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Oryza sativa
cluster # 4737 cluster # 4737       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4737#0 length = 1040 sequences # 3  

consensusID : consensus_4737#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1040
fasta sequence
                              [GCCTCCGCAGCCAGTTCCTCTCCGTGGAGCCCGACCTCTTCCACGACGCGCTCGTCGCGCCAAGCCCCGACCACCTCGGCTTCCCCGATGAGGAGGAGGAGGAGGAGATCCGGTGGGATTGCCTCCAATTGGATGACGACGACGAGGAGGAGGAGGGGGTGGCGGATCTGCGGCTTGAGGCCTCCAACGCGGCGGAGGAATTCGATTGGGAGGAGGTGGCATCGCCCTCCGGCGGCGCCGGGATGGATCAGCCGGAGCCCGAGTGGGAGGTCCTCGCCGACGTGCCGCCGCCGCCGCCGCCGCCCGCCGACGAGGGCTTCGTGTACACCTCCGACCGTGACGTGTACGAGGTGCTCGTCGGGGAGGGTTTGTTCCTGAAGAGCAAGCCGCCCGCGGCGAGGTCGGCCGTCGAGGCGCTACCGTCCGCCGTCGTCGCCGCCGGCGAGGACGGCGAAGGGG-AGGAGTGCGCGGTGTG--CAGGGACGGCGTCGCCGCCGGGGAGCGCGTGAAGAGGCTGCCCTGCTCGCACGGTTACCACGAGGAGTGCATCATGCCGTGGCTCGACGTGCGCAACTCGTGCCCGCTCTGCCGCTTCGAGCTGCCCACCGACGACCCCCAGTACGAGAGCTGGAAGGCCTCGCGAG-CTGCGGCTGCCTGAATTGCTGCGCGGTAAAAAAAAAAGGCAAGCCTTTCTTTTCTTGCACAGATTTTATAGAGTTGTATGTCTTGGGTTTCAAACTGGTACTATGATGAAAGAACCAAACTGGTATGATGAAAGAAAGCGTAGAGGTAGTCGCA-GAGATGGTTTTGCACCTTTCGATTTGTTTACTTTTTTTCTTA-AAAGAGGGATTTGTGTTGTGACTTAAGGTTGCGAGGATATTACATAAGTTTATCCTATATATATACTGTTGTATTTATTCTGAATTTGTAGAGTAGCTTCTGTATTACATTTTGCCCTGCAGCACAATTTTGTAAATGGATATGGTGGTGAAAATTTCAGCATGTGGGTGTTCCTGATTCAACTCTAATGAGTTTTATTTTT]

[+] EMBL AK066326             [GCCTCCGCAGCCAGTTCCTCTCCGTGGAGCCCGACCTCTTCCACGACGCGCTCGTCGCGCCAAGCCCCGACCACCTCGGCTTCCCCGATGAGGAGGAGGAGGAGGAGATCCGGTGGGATTGCCTCCAATTGGATGACGACGACGAGGAGGAGGAGGGGGTGGCGGATCTGCGGCTTGAGGCCTCCAACGCGGCGGAGGAATTCGATTGGGAGGAGGTGGCATCGCCCTCCGGCGGCGCCGGGATGGATCAGCCGGAGCCCGAGTGGGAGGTCCTCGCCGACGTGCCGCCGCCGCCGCCGCCGCCCGCCGACGAGGGCTTCGTGTACACCTCCGACCGTGACGTGTACGAGGTGCTCGTCGGGGAGGGTTTGTTCCTGAAGAGCAAGCCGCCCGCGGCGAGGTCGGCCGTCGAGGCGCTACCGTCCGCCGTCGTCGCCGCCGGCGAGGACGGCGAAGGGG AGGAGTGCGCGGTGTG  CAGGGACGGCGTCGCCGCCGGGGAGCGCGTGAAGAGGCTGCCCTGCTCGCACGGTTACCACGAGGAGTGCATCATGCCGTGGCTCGACGTGCGCAACTCGTGCCCGCTCTGCCGCTTCGAGCTGCCCACCGACGACCCCCAGTACGAGAGCTGGAAGGCCTCGCGAG CTGCGGCTGCCTGAATTGCTGCGCGGTAAAAAAAAAAGGCAAGCCTTTCTTTTCTTGCACAGATTTTATAGAGTTGTATGTCTTGGGTTTCAAACTGGTACTATGATGAAAGAACCAAACTGGTATGATGAAAGAAAGCGTAGAGGTAGTCGCA GAGATGGTTTTGCACCTTTCGATTTGTTTACTTTTTTTCTTA AAAGAGGGATTTGTGTTGTGACTTAAGGTTGCGAGGATATTACATAAGTTTATCCTATATATATACTGTTGTATTTATTCTGAATTTGTAGAGTAGCTTCTGTATTACATTTTGCCCTGCAGCACAATTTTGTAAATGGATATGGTGGTGA                                                   ]
[+] EMBL CA763982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cAAGGGG AGGAGTGCGCGGTGTG  CAGGGACGGCGTCGCCGCCGGGGAGCGCGTGAAGAGGCTGCCCTGCTCGCACGGTTACCACGAGGAGTGCATCATGCCGTGGCTCGACGTGCGCAACTCGTGCCCGCTCTGCCGCTTCGAGCTGCCCACCGACGACCCCCAGTACGAGAGCTGGAAGGCCTCGCGAG CTGCGGCTGCCTGAATTGCTGCGCGGTAAAAAAAAAAGGCAAGCCTTTCTTTTCTTGCACAGATTTTATAGAGTTGTATGTCTTGGGTTTCAAACTGGTACTATGATGAAAGAACCAAACTGGTATGATGAAAGAAAGCGTAGAGGTAGTCGCA GAGATGGTTTTGCACCTTTCGATTTGTTTACTTTTTTTCTTA AAAGAGGGATTTGTGTTGTGACTTAAGGTTGCGAGGATATTACATAAGTTTATCCTATATATATACTGTTGTATTTATTCTGAATTTGTAGAGTAGCTTCTGTATTACATTTTGCCCTGCAGCACAATTTTGTAAATGGATATGGTGGTGAAAATTTCAGCATGTGGGTGTTCCTGATTCAACTCTAATGAGTTTTATTTTT]
[+] EMBL BI812796             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cctAAGGGGTAGGAGTGCCCGGTGTGCACAGGGACGGCGTC CC CCGGGGAGCGCGTGTAGAGGCTGCCCTGCTCGCACGGTTACCCCGAGGAGTGCATCATCCCGTGGCTCGACGTGCGCAACTCGTGCCCGCTCTGCCGCTTCGAGCTGCCCACCGACGACCCCCCGTACGAGAGCTGGAAGGCCTCGCGAGTCTTCGGCTGCCTGAATTGCTGCGCGGTAAAAAAAAAAGGCAAGCCTTTCTTTTCTTGCACAGACTTTATAGAGTTGTATGTCTTGGGTTTCAAACTGGTACTATGATGAAAGAACCCCACTGGTATGATGAAAGAAAGCGTAGAGGTAGTCGCACGAGATGGTTTTGCACCTTTCGATTTGTGTACTTTTTTTCTTATAAAGAGGGATTTGTGTTGTGACTTAAGGTTGCGAGGATATTACATAAGTTTATCCTATATATATACTGTTGTATTTAaaaaaaaaa                                                                                                                    ]


>consensus_4737#0 GCCTCCGCAGCCAGTTCCTCTCCGTGGAGCCCGACCTCTTCCACGACGCGCTCGTCGCGC CAAGCCCCGACCACCTCGGCTTCCCCGATGAGGAGGAGGAGGAGGAGATCCGGTGGGATT GCCTCCAATTGGATGACGACGACGAGGAGGAGGAGGGGGTGGCGGATCTGCGGCTTGAGG CCTCCAACGCGGCGGAGGAATTCGATTGGGAGGAGGTGGCATCGCCCTCCGGCGGCGCCG GGATGGATCAGCCGGAGCCCGAGTGGGAGGTCCTCGCCGACGTGCCGCCGCCGCCGCCGC CGCCCGCCGACGAGGGCTTCGTGTACACCTCCGACCGTGACGTGTACGAGGTGCTCGTCG GGGAGGGTTTGTTCCTGAAGAGCAAGCCGCCCGCGGCGAGGTCGGCCGTCGAGGCGCTAC CGTCCGCCGTCGTCGCCGCCGGCGAGGACGGCGAAGGGGAGGAGTGCGCGGTGTGCAGGG ACGGCGTCGCCGCCGGGGAGCGCGTGAAGAGGCTGCCCTGCTCGCACGGTTACCACGAGG AGTGCATCATGCCGTGGCTCGACGTGCGCAACTCGTGCCCGCTCTGCCGCTTCGAGCTGC CCACCGACGACCCCCAGTACGAGAGCTGGAAGGCCTCGCGAGCTGCGGCTGCCTGAATTG CTGCGCGGTAAAAAAAAAAGGCAAGCCTTTCTTTTCTTGCACAGATTTTATAGAGTTGTA TGTCTTGGGTTTCAAACTGGTACTATGATGAAAGAACCAAACTGGTATGATGAAAGAAAG CGTAGAGGTAGTCGCAGAGATGGTTTTGCACCTTTCGATTTGTTTACTTTTTTTCTTAAA AGAGGGATTTGTGTTGTGACTTAAGGTTGCGAGGATATTACATAAGTTTATCCTATATAT ATACTGTTGTATTTATTCTGAATTTGTAGAGTAGCTTCTGTATTACATTTTGCCCTGCAG CACAATTTTGTAAATGGATATGGTGGTGAAAATTTCAGCATGTGGGTGTTCCTGATTCAA CTCTAATGAGTTTTATTTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)