cluster # 4748

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Oryza sativa
cluster # 4748 cluster # 4748 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4748#0 length = 2607 sequences # 3
consensusID : consensus_4748#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2607
fasta sequence
                              [TGAAAATTCTCGCTTGCGGGGGTTGGACCCTGGAGCCTGGAGTCGAAGAGCTTGCCGCCGGTAGAATCCATGGTGCGGATTCGCGCCAGCGTGGACCGGCCAGGTCCGTGGCCGCGCAGATCGAGCTTGCATGGGCTGGCTAGCTCCCTGGTAGGTCCCTGTCCTCCTCTCCTCGCTCTGCTCTCTCTTCCTCCATCCCGGCATGGATTGGGCGCAGGTGACGCGGATCAACGCAGCCGCTCCCGGCCAGCATCAACCTCACTTGAAAGAAGCAGAGCGATTTTCCACCTTGGCTGGATCAGATACTATTTGTCTTCGATTCTGTGAGTTTATATTTGATTTTCTGTCTTTTCTTCAACTCGATTTTGTTAAAGTATATCTCTGTGTAATCCGTGTGCTTTGGATTAGGATGGCCGGTGGATTAAGCTATAGATTAGCTTAGGTTGTTGTGATCACATGTAATAAGGATCCGGCCGTTCTATCCATAGCGCATGCCTATTTGTATCTTCTCCATCGCCGTTTTGTGCGATAGGTTAACACGCATCGTCGACCCGAGTGCAAAGGACGACGTTCCCATCCATCCTGTTTTCCCACATGGTATCAGAGCGCTGAAGTTAGATCCCATCTACCATGGCTAGCTCCTCCTCTTCCACCTCCACAAATTCCTTGTTCTGCTTCAATGTTTCTGAGAAGTTGAGCAAGCAAAATTATCAGCTGTGGTGCGCACAAGTGCTGACTGCGATTCGTGGGGCACGCCTCAAGGGGCATCTGAAAGGCAAGACCGTCACTCCCGCCGCCCACATCGAAGCAGAAAAGAAAGAAGATGACAAGACGAAGATCAAGATCATGATCGACAACCCAGCGTACGAAAGAGTGGTTTGCCGCGGATCAACAGGTTCTCGGCTTCCTCTTTTCATCGCTGTCACGGAATATATTATCCCAGGTTGCCACGGCGACCACAGCGACAGATGCCTGGAAGATGATCCAGGAGATGTTCAACTCCAGGGCGACTCGCGCGCGCTCCCTCAACGTGCTGCTATCTCTCACCAGCACTAGGAAGGGAACCCAGACCATCTCAGAGTACTTCGCCAAGATGAAGGCCTTAGCAGATGAACTAGCGATGTCAGGGAAGCAAGTCGATGCCGAAGAACTCACTGCTTTTATCTTAAATGGTTTAGATGATGATTATGATTCTGTTGTATCGGCTTTAGCGGCCAAAACTAAACCTATTACTCTATCAGAAACATATGCCCAGCTATTGAACTTTGAGAACAGGCTTAATCTACGACGAGAAGGCAACATGACGGCCAATGTAGCCGGGCGCGGCCGTGGCAACGCTCCGAGCAACCGGGGTGGTGCCGGCCGTGGACGTGGTGGTCGCGGCGGCTTCAATGGTGCTGGCACAAACGCCGGCTGTGGAGGACGTGGCGCTGGACAGCAGCAGCGCTCCGGCAACGACACACGACCCGTGTGTCTGGTGTGCTACAAGCGGGGACATGTTGCAGCAGATTGCTGGCATAGGTATGATGATTCTTATGTGCCAGATGAGCGACACCTTGCTGCAGCAGCCTCCTACGCCTATTTTTTTTAGATAAGTCACCGGAGGGGAGAGGTTCCCCACCTGAATTGCATTAAATAAATAGAGTAAGGGTTACAACTGAGTTTACATGACATGAAGAGATTGCAAGGGGGAGGAGAAGATCCCTTTCCAAATTGAAACTACAACTCTATCAGGAGGCTTAAGACGTTCAGACCAGAGAGAACATTCGTCCACACATTTCCTAATTGCTGCCGGAACTGAAGCATCCAGGTTGCGGAAAACAACGTCGTGTCTGTGGTTCCATAGTGCCCATAAGCAGAGAAGATAGAAGACATGGTGGTGCAGCTCGGGCAGGTTTCCATTGGGGCGCAGACGTCCGAGTTGACGAACATCCTGAATAAGCGGGTCAATGCCGATCGTCGTCCAGAATTGCTGGGCAAAGGGGCAAAGGAAGCAGATGTGACTTGCAATTTCAGATGCAGCTCCACAAATGGAGTCGACTCCAATCGGTACATGGTCTCAGGCGCCACGGACCACATCACCGGTGAACTGGACAAGCTCACGGTTAGCGACAAGTACAAGGCGAACGATCAAGTGCACACTGCCAATGGAGCAGGATCAGGCTACGAGGGCAACAATGCTTGAGGGACGGCGATACAAGGGACTCTACCCGCTTCCTCCTTCATCTCCTGCATCCTCTCCAAAGGCTGTTTACGGTGTGGCGCCATCTTTTGCAAGATGGCATAGTCGGCTAGGTCATCCTTCAAGTCCTATAGCGTCTGAAGTTATTAGCACAAATAATCTACCTTGTCATGACAAGGCTAGTAAAGAGTCTGTGTGTGATGTGTGTCAGATGGCCAAGAGTCATCAACTTCCTTACAATAGATCTACTAGTGTTTCTCAATTTCCTTTGGAACTCATTTCCTCAGATGTCTACGGACCTGCTCCTATTTCTGTTGGTAGACATAAATATTATGTGAGTTTTGTGGATGATTATAGTAAGTTTACCTGGGTTTACCTTCTTAAAGCAAAATCAGATTTTTTCAGGTCTTCCATGAATTCCAAGC]

[+] EMBL AK069573             [TGAAAATTCTCGCTTGCGGGGGTTGGACCCTGGAGCCTGGAGTCGAAGAGCTTGCCGCCGGTAGAATCCATGGTGCGGATTCGCGCCAGCGTGGACCGGCCAGGTCCGTGGCCGCGCAGATCGAGCTTGCATGGGCTGGCTAGCTCCCTGGTAGGTCCCTGTCCTCCTCTCCTCGCTCTGCTCTCTCTTCCTCCATCCCGGCATGGATTGGGCGCAGGTGACGCGGATCAACGCAGCCGCTCCCGGCCAGCATCAACCTCACTTGAAAGAAGCAGAGCGATTTTCCACCTTGGCTGGATCAGATACTATTTGTCTTCGATTCTGTGAGTTTATATTTGATTTTCTGTCTTTTCTTCAACTCGATTTTGTTAAAGTATATCTCTGTGTAATCCGTGTGCTTTGGATTAGGATGGCCGGTGGATTAAGCTATAGATTAGCTTAGGTTGTTGTGATCACATGTAATAAGGATCCGGCCGTTCTATCCATAGCGCATGCCTATTTGTATCTTCTCCATCGCCGTTTTGTGCGATAGGTTAACACGCATCGTCGACCCGAGTGCAAAGGACGACGTTCCCATCCATCCTGTTTTCCCACATGGTATCAGAGCGCTGAAGTTAGATCCCATCTACCATGGCTAGCTCCTCCTCTTCCACCTCCACAAATTCCTTGTTCTGCTTCAATGTTTCTGAGAAGTTGAGCAAGCAAAATTATCAGCTGTGGTGCGCACAAGTGCTGACTGCGATTCGTGGGGCACGCCTCAAGGGGCATCTGAAAGGCAAGACCGTCACTCCCGCCGCCCACATCGAAGCAGAAAAGAAAGAAGATGACAAGACGAAGATCAAGATCATGATCGACAACCCAGCGTACGAAAGAGTGGTTTGCCGCGGATCAACAGGTTCTCGGCTTCCTCTTTTCATCGCTGTCACGGAATATATTATCCCAGGTTGCCACGGCGACCACAGCGACAGATGCCTGGAAGATGATCCAGGAGATGTTCAACTCCAGGGCGACTCGCGCGCGCTCCCTCAACGTGCTGCTATCTCTCACCAGCACTAGGAAGGGAACCCAGACCATCTCAGAGTACTTCGCCAAGATGAAGGCCTTAGCAGATGAACTAGCGATGTCAGGGAAGCAAGTCGATGCCGAAGAACTCACTGCTTTTATCTTAAATGGTTTAGATGATGATTATGATTCTGTTGTATCGGCTTTAGCGGCCAAAACTAAACCTATTACTCTATCAGAAACATATGCCCAGCTATTGAACTTTGAGAACAGGCTTAATCTACGACGAGAAGGCAACATGACGGCCAATGTAGCCGGGCGCGGCCGTGGCAACGCTCCGAGCAACCGGGGTGGTGCCGGCCGTGGACGTGGTGGTCGCGGCGGCTTCAATGGTGCTGGCACAAACGCCGGCTGTGGAGGACGTGGCGCTGGACAGCAGCAGCGCTCCGGCAACGACACACGACCCGTGTGTCTGGTGTGCTACAAGCGGGGACATGTTGCAGCAGATTGCTGGCATAGGTATGATGATTCTTATGTGCCAGATGAGCGACACCTTGCTGCAGCAGCCTCCTACGCCTATTTTTTTTAGATAAGTCACCGGAGGGGAGAGGTTCCCCACCTGAATTGCATTAAATAAATAGAGTAAGGGTTACAACTGAGTTTACATGACATGAAGAGATTGCAAGGGGGAGGAGAAGATCCCTTTCCAAATTGAAACTACAACTCTATCAGGAGGCTTAAGACGTTCAGACCAGAGAGAACATTCGTCCACACATTTCCTAATTGCTGCCGGAACTGAAGCATCCAGGTTGCGGAAAACAACGTCGTGTCTGTGGTTCCATAGTGCCCATAAGCAGAGAAGATAGAAGACATGGTGGTGCAGCTCGGGCAGGTTTCCATTGGGGCGCAGACGTCCGAGTTGACGAACATCCTGAATAAGCGGGTCAATGCCGATCGTCGTCCAGAATTGCTGGGCAAAGGGGCAAAGGAAGCAGATGTGACTTGCAATTTCAGATGCAGCTCCACAAATGGAGTCGACTCCAATCGGTACATGGTCTCAGGCGCCACGGACCACATCACCGGTGAACTGGACAAGCTCACGGTTAGCGACAAGTACAAGGCGAACGATCAAGTGCACACTGCCAATGGAG      CAGGCTACGAGGGCAACAATGCTTGAGGGACGGCGATACAAGGGACTCTACCCGCTTCCTCCTTCATCTCCTGCATCCTCTCCAAAGGCTGTTTACGGTGTGGCGCCATCTTTTGCAAGATGGCATAGTCGGCTAGGTCATCCTTCAAGTCCTATAGCGTCTGAAGTTATTAGCACAAATAATCTACCTTGTCATGACAAGGCTAGTAAAGAGTCTGTGTGTGATGTGTGTCAGATGGCCAAGAGTCATCAACTTCCTTACAATAGATCTACTAGTGTTTCTCAATTTCCTTTGGAACTCATTTCCTCAGATGTCTACGGACCTGCTCCTATTTCTGTTGGTAGACATAAATATTATGTGAGTTTTGTGGATGATTATAGTAAGTTTACCTGGGTTTACCTTCTTAAAGCAAAATCAGATTTTTTCAGGTCTTCCATGAATTCCAAGC]
[+] EMBL AU082728             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGACGTTCAGACCAGAGAGAACATTCGTCCACACATTTCCTAATTGCTGCCGGAACTGAAGCATCCAGGTTGCGGAAAACAACGTCGTGTCTGTGGTTCCATAGTGCCCATAAGCAGAGAAGATAGAAGACATGGTGGTGCAGCTCGGGCAGGTTTCCATTGGGGCGCAGACGTCCGAGTTGACGAACATCCTGAATAAGCGGGTCAATGCCGATCGTCGTCCAGAATTGCTGGGCAAAGGGGCAAAGGAAGCAGATGTGACTTGCAATTTCAGATGCAGCTCCACAAATGGAGTCGACTCCAATCGGTACATGGTCTCAGGCGCCACGGACCACATCACCGGTGAACTGGACAAGCTCACGGTTAGCGACAAGTACAAGGCGAACGATCAAGTGCACACTGCCAATGGAGCAGGATCAGGCTACGAGGGCAACAATGCTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU082729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  tncccTCCTCCAGAATTGCTGGGCAAAGGNGCAAAGGAAGCAGATGTGACTTGCAATTTCAGATGCAGCTCCACAAATGGAGTCGACTCCAATCGGTACATGGTCTCAGGCGCCACGGACCACATCACCGGTGAACTGGACAAGCTCACGGTTAGCGACAAGTACAAGGCGANCGATCAAGTGCACACTGCCAATGGAGCAGGATCAGGCTACGAGGGCAACAATGCTTGAGGGACGGCGATACAAGGGACTCTACCCGCTTCCTCCTTCATCTCCTGCATCCTCTCCAAAGGCTGTTTACGGTGTGGCGCCATCTTTTGCAAGATGGCATAGTCGGCTAGGTCATCCTTCAAGTCCTATAGCGTCTAAAGTTATTAGCACAAATAATCTACCTTGTCATGACAAGGCTAGTAAAGAGTCTGTGTGTGATGTGTGTCAGATGGCCAAGAGTCATCAACTTCCTTACAATAGATCTACTAGTGTTTCTCAATTTCCTTTGGAACTCATTTCCTCAGATGTCTACGGACCTGCTCCTATTTCTGTTGGTAGACATAAATATTATGTGAGTTTTGTGGATGATTATAGTAAGTTTACCTGGGTTTACCTTCTTAAAaaa                                     ]




>consensus_4748#0
TGAAAATTCTCGCTTGCGGGGGTTGGACCCTGGAGCCTGGAGTCGAAGAGCTTGCCGCCG
GTAGAATCCATGGTGCGGATTCGCGCCAGCGTGGACCGGCCAGGTCCGTGGCCGCGCAGA
TCGAGCTTGCATGGGCTGGCTAGCTCCCTGGTAGGTCCCTGTCCTCCTCTCCTCGCTCTG
CTCTCTCTTCCTCCATCCCGGCATGGATTGGGCGCAGGTGACGCGGATCAACGCAGCCGC
TCCCGGCCAGCATCAACCTCACTTGAAAGAAGCAGAGCGATTTTCCACCTTGGCTGGATC
AGATACTATTTGTCTTCGATTCTGTGAGTTTATATTTGATTTTCTGTCTTTTCTTCAACT
CGATTTTGTTAAAGTATATCTCTGTGTAATCCGTGTGCTTTGGATTAGGATGGCCGGTGG
ATTAAGCTATAGATTAGCTTAGGTTGTTGTGATCACATGTAATAAGGATCCGGCCGTTCT
ATCCATAGCGCATGCCTATTTGTATCTTCTCCATCGCCGTTTTGTGCGATAGGTTAACAC
GCATCGTCGACCCGAGTGCAAAGGACGACGTTCCCATCCATCCTGTTTTCCCACATGGTA
TCAGAGCGCTGAAGTTAGATCCCATCTACCATGGCTAGCTCCTCCTCTTCCACCTCCACA
AATTCCTTGTTCTGCTTCAATGTTTCTGAGAAGTTGAGCAAGCAAAATTATCAGCTGTGG
TGCGCACAAGTGCTGACTGCGATTCGTGGGGCACGCCTCAAGGGGCATCTGAAAGGCAAG
ACCGTCACTCCCGCCGCCCACATCGAAGCAGAAAAGAAAGAAGATGACAAGACGAAGATC
AAGATCATGATCGACAACCCAGCGTACGAAAGAGTGGTTTGCCGCGGATCAACAGGTTCT
CGGCTTCCTCTTTTCATCGCTGTCACGGAATATATTATCCCAGGTTGCCACGGCGACCAC
AGCGACAGATGCCTGGAAGATGATCCAGGAGATGTTCAACTCCAGGGCGACTCGCGCGCG
CTCCCTCAACGTGCTGCTATCTCTCACCAGCACTAGGAAGGGAACCCAGACCATCTCAGA
GTACTTCGCCAAGATGAAGGCCTTAGCAGATGAACTAGCGATGTCAGGGAAGCAAGTCGA
TGCCGAAGAACTCACTGCTTTTATCTTAAATGGTTTAGATGATGATTATGATTCTGTTGT
ATCGGCTTTAGCGGCCAAAACTAAACCTATTACTCTATCAGAAACATATGCCCAGCTATT
GAACTTTGAGAACAGGCTTAATCTACGACGAGAAGGCAACATGACGGCCAATGTAGCCGG
GCGCGGCCGTGGCAACGCTCCGAGCAACCGGGGTGGTGCCGGCCGTGGACGTGGTGGTCG
CGGCGGCTTCAATGGTGCTGGCACAAACGCCGGCTGTGGAGGACGTGGCGCTGGACAGCA
GCAGCGCTCCGGCAACGACACACGACCCGTGTGTCTGGTGTGCTACAAGCGGGGACATGT
TGCAGCAGATTGCTGGCATAGGTATGATGATTCTTATGTGCCAGATGAGCGACACCTTGC
TGCAGCAGCCTCCTACGCCTATTTTTTTTAGATAAGTCACCGGAGGGGAGAGGTTCCCCA
CCTGAATTGCATTAAATAAATAGAGTAAGGGTTACAACTGAGTTTACATGACATGAAGAG
ATTGCAAGGGGGAGGAGAAGATCCCTTTCCAAATTGAAACTACAACTCTATCAGGAGGCT
TAAGACGTTCAGACCAGAGAGAACATTCGTCCACACATTTCCTAATTGCTGCCGGAACTG
AAGCATCCAGGTTGCGGAAAACAACGTCGTGTCTGTGGTTCCATAGTGCCCATAAGCAGA
GAAGATAGAAGACATGGTGGTGCAGCTCGGGCAGGTTTCCATTGGGGCGCAGACGTCCGA
GTTGACGAACATCCTGAATAAGCGGGTCAATGCCGATCGTCGTCCAGAATTGCTGGGCAA
AGGGGCAAAGGAAGCAGATGTGACTTGCAATTTCAGATGCAGCTCCACAAATGGAGTCGA
CTCCAATCGGTACATGGTCTCAGGCGCCACGGACCACATCACCGGTGAACTGGACAAGCT
CACGGTTAGCGACAAGTACAAGGCGAACGATCAAGTGCACACTGCCAATGGAGCAGGATC
AGGCTACGAGGGCAACAATGCTTGAGGGACGGCGATACAAGGGACTCTACCCGCTTCCTC
CTTCATCTCCTGCATCCTCTCCAAAGGCTGTTTACGGTGTGGCGCCATCTTTTGCAAGAT
GGCATAGTCGGCTAGGTCATCCTTCAAGTCCTATAGCGTCTGAAGTTATTAGCACAAATA
ATCTACCTTGTCATGACAAGGCTAGTAAAGAGTCTGTGTGTGATGTGTGTCAGATGGCCA
AGAGTCATCAACTTCCTTACAATAGATCTACTAGTGTTTCTCAATTTCCTTTGGAACTCA
TTTCCTCAGATGTCTACGGACCTGCTCCTATTTCTGTTGGTAGACATAAATATTATGTGA
GTTTTGTGGATGATTATAGTAAGTTTACCTGGGTTTACCTTCTTAAAGCAAAATCAGATT
TTTTCAGGTCTTCCATGAATTCCAAGC
clustalw multiple alignements is not computed in this case