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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4754 cluster # 4754       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4754#0 length = 919 sequences # 3  

consensusID : consensus_4754#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 919
fasta sequence
                              [CTGTCCCTGCCCACGCCGCCGCCTTCGCCGCCGTCCGCCGCCCCCGCCGCTGCCCCAGTGGAGATGGCGCCTGGCACCACCCTCGCCCCCAAGCGCCGCAAGGCAGAGGCGTCCCCTTCCCCTTCCCCTTCCCCTATGGGGGATTCTTCCGACGGCGGCTACAGCGACTCCGACCTCCACGACGCCGAGGAAAGCTTCTACTCCGCGAGGAGCGGCTCCGAGGACGACCGCCAAGTTTCCTCCAGCAACGACGACGACGATAGCGAGGAGGAGGAGCAAGAGGAGCGGGAGATGGATGAGGAGGAGGACGAAGAGGATGATGATGATGAGGAGATGAATGAGGAGGATGACGAGGATGAGGGGGAGGAGATGAACGAGCTCGAGAAGGAGTACCGCACGCTCCAGACCAATCAACAAAATATTTTGGAGACATTGAAACAGCACAGAGATGACGATGTTTCGAAGGGCCAGGCGGTCAAAAATCAAAAGGTGTTGTGGGACAAGGCACTCGAGATGAGATTCTTGCTGCAAAAGGCATTTTCCACTTCAAACAAGTTGCCCAAGGAACCCATCAGGTCGATGTTTTGTGATCACAATCAGGAGATAGAGCAAGCTTATCTTGATCTG-TTGAATTCATCGAAGCAGACTC-TTGGTTCCATGATGGAGCTTCAGGAGGCCTTGCTGGAGAGGAATCGTGCTACAAAGGATGTAACTGATACTGATAATTCTTCAGAGTTGAATGGAGAGGATGATGAGTGGTCAGAAGTTCAGAAATTGCAGAAAAGGATAACTCCGTTCAGAAATAGTGAGATAGATAAATGGCAGAGGAAAACACAAGTGACAACCGGTGCTGCTGCATTGAAGGGAAAGTTGCATGCTTTTAATCAGAATATAAGTGACCAAGTTACTAGTTACATGA]

[+] EMBL AK063442             [CTGTCCCTGCCCACGCCGCCGCCTTCGCCGCCGTCCGCCGCCCCCGCCGCTGCCCCAGTGGAGATGGCGCCTGGCACCACCCTCGCCCCCAAGCGCCGCAAGGCAGAGGCGTCCCCTTCCCCTTCCCCTTCCCCTATGGGGGATTCTTCCGACGGCGGCTACAGCGACTCCGACCTCCACGACGCCGAGGAAAGCTTCTACTCCGCGAGGAGCGGCTCCGAGGACGACCGCCAAGTTTCCTCCAGCAACGACGACGACGATAGCGAGGAGGAGGAGCAAGAGGAGCGGGAGATGGATGAGGAGGAGGACGAAGAGGATGATGATGATGAGGAGATGAATGAGGAGGATGACGAGGATGAGGGGGAGGAGATGAACGAGCTCGAGAAGGAGTACCGCACGCTCCAGACCAATCAACAAAATATTTTGGAGACATTGAAACAGCACAGAGATGACGATGTTTCGAAGGGCCAGGCGGTCAAAAATCAAAAGGTGTTGTGGGACAAGGCACTCGAGATGAGATTCTTGCTGCAAAAGGCATTTTCCACTTCAAACAAGTTGCCCAAGGAACCCATCAGGTCGATGTTTTGTGATCACAATCAGGAGATAGAGCAAGCTTATCTTGATCTG TTGAATTCATCGAAGCAGACTC TTGGTTCCATGATGGAGCTTCAGGAGGCCTTGCTGGAGAGGAATCGTGCTACAAAGGATGTAACTGATACTGATAATTCTTCAGAGTTGAATGGAGAGGATGATGAGTGGTCAGAAGTTCAGAAATTGCAGAAAAGGATAACTCCGTTCAGAAATAGTGAGATAGATAAATGGCAGAGGAAAACACAAGTGACAACCGGTGCTGCTGCATTGAAGGGAAAGTTGCATGCTTTTAATCAGAATATAAGTGACCAAGTTACTAGTTACATGA]
[+] EMBL C26310               [                                                                                                                                                                                                                                                                                                                AGGACGAAGAGGATGATGATGATGAGGAGATGAATGAGGAGGATGACGAGGATGAGGGGGAGGAGATGAACGAGCTCGAGAAGGAGTACCGCACGCTCCAGACCAATCAACAAAATATTTTGGAGACATTGAAACAGCACAGAGATGACGATGTTTCGAAGGGCCAGGCGGTCAAAAATCAAAAGGTGTTGTGGGACAAGGCACTCGAGATGAGATTCTTGCTGCAAAAGGCATTTTCCACTTCAAACAAGTTGCCCAAGGAACCCATCAGGTCGATGTTTTGTGATCACAATCAGGAGATAGAGCAAGCTTATCTTGATCTGTTTGAATTCATCGAAGCAGACTCTTTGGTTCCATGATGGAGCTTCAGGAGGCCTTNCTGGAGAGGNATCGTGCTACAAAGGA                                                                                                                                                                                                                    ]
[+] EMBL OS0569A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAAAGGATGTAACTGATACTGATAATTCTTCAGAGTTGAATGGAGAGGATGATGAGTGGTCAGAAGTTCAGAAATTGCAGAAAAGGATAACTCCGTTCAGAAATAGTGAGATAGATAAATGGCAGAGGAAAACACAAGTGACAACCGGTGCTGCTGCATTGAAGGGAAAGTTGCATGCTTTTAATCAGAATATAAGTGACCAAGTTACTAGTTACATGA]


>consensus_4754#0 CTGTCCCTGCCCACGCCGCCGCCTTCGCCGCCGTCCGCCGCCCCCGCCGCTGCCCCAGTG GAGATGGCGCCTGGCACCACCCTCGCCCCCAAGCGCCGCAAGGCAGAGGCGTCCCCTTCC CCTTCCCCTTCCCCTATGGGGGATTCTTCCGACGGCGGCTACAGCGACTCCGACCTCCAC GACGCCGAGGAAAGCTTCTACTCCGCGAGGAGCGGCTCCGAGGACGACCGCCAAGTTTCC TCCAGCAACGACGACGACGATAGCGAGGAGGAGGAGCAAGAGGAGCGGGAGATGGATGAG GAGGAGGACGAAGAGGATGATGATGATGAGGAGATGAATGAGGAGGATGACGAGGATGAG GGGGAGGAGATGAACGAGCTCGAGAAGGAGTACCGCACGCTCCAGACCAATCAACAAAAT ATTTTGGAGACATTGAAACAGCACAGAGATGACGATGTTTCGAAGGGCCAGGCGGTCAAA AATCAAAAGGTGTTGTGGGACAAGGCACTCGAGATGAGATTCTTGCTGCAAAAGGCATTT TCCACTTCAAACAAGTTGCCCAAGGAACCCATCAGGTCGATGTTTTGTGATCACAATCAG GAGATAGAGCAAGCTTATCTTGATCTGTTGAATTCATCGAAGCAGACTCTTGGTTCCATG ATGGAGCTTCAGGAGGCCTTGCTGGAGAGGAATCGTGCTACAAAGGATGTAACTGATACT GATAATTCTTCAGAGTTGAATGGAGAGGATGATGAGTGGTCAGAAGTTCAGAAATTGCAG AAAAGGATAACTCCGTTCAGAAATAGTGAGATAGATAAATGGCAGAGGAAAACACAAGTG ACAACCGGTGCTGCTGCATTGAAGGGAAAGTTGCATGCTTTTAATCAGAATATAAGTGAC CAAGTTACTAGTTACATGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)