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Oryza sativa
cluster # 4790 cluster # 4790       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4790#0 length = 3744 sequences # 1  
 consensus_4790#1 length = 519 sequences # 2  
consensusID : consensus_4790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3744
fasta sequence 
                              [CTAGAGAGAGGTCTTCGTTGCTGCCTATCGTTCTTGTGTGTCCTAAAAAATTCGAGTGGAGAGGGAAGAACCAGTAGCGCTAGCGCAAGCAGATTGTGGTTGGCGGCCATGGAGACCGCGGTGCTGAGCGCCGTGCTCAGAACGCTGGGGCCGAAGCTCTACGCGTTCCTCCGTGACGGGCACGACCTGTTGCGGCGGGACCTGGAGCGCGACGTCCACTACATCCGGAACGAGCTCGCCATGATCGCCGCCGCGATCGAGGAGCACGACCGCCGCCCGCCGCCCGCCGCAGGCGACGTGCGGAGCGCCTGGATCCGCGGCGTGCGCGACCTGGCCTGCGACATGGAGGACTGCGTCGACCGCTTCGTGCACCGCGCCACCGGCCACGGCCTGGCCTCCATGGGCGCCCGCGCCAAGTTCGCCGCCGTGATCCAGGAGCTCAGGAGGAAATCCGAGGAGCTGTCCCGCCTCAGAGCCAGTTACGCCGCCGCCGCCGGCGAGCCCAGCTGCTGGGTGGCTACAGGATCATCCGCGTTGACCCTGCCGGCGTCGTCGTCTGAGGCGCACACCCTTGCATCTGACATCGTGGGGATGGACGGGCCCCGGGACGAGATTCTTGAGCTGATAGGGGAAACCCAGGGCCAGCTCAAGGTGATCTCCATTGTTGGGTTTGGTGGGTTAGGGAAGACGCTTCTTGCCAGGCAAATCTACGAGAGCGACGCCGTCGCCGCGCAATTCCATCCACGGATTTGGGTTCGTGCCGCGGGGAAGAACGCAGAGGATGTCCTCATGGACATTCTCCAGCAGCTGGGGATGCCGGTACATCACTGCCATGCCAGCAATCTCGTTGTAAATCTCAGAAATTGCCTTGAATCCAAGAGGTAAGAAACCAACCACTGACATGTTCAACTGTTGTTACTGTTTGTTACCAAATCAATCTCTGTTGTGTGTCCTTCATCCTACACCTTTTGCGGCCTCTGAAAGCAATTGCTTCCAAGAACTACGAGGGATTGAGGAGCACTAGAGTTGTTTTTCTTGATTTGTTTTATACTCAACTTAAACGAAGTATCAGAAGGTACAACGTATTTTAGTACTAATCTACATTTCAGTCATACAGAGTAAGGTGAGTACAAAAAGTTAGCCCTCAAGTGCAGAAAGAATCACATGTTCTTTGTTGTAATTGACGACATGCAGAGGGAATATTGGAACAGCTCTTTCAGAAATGCCTTTCCTTCTGATACGGGACTGAGAAGCATTGTGATCGTAACGACGGCCATCCAGTCCATAGCAAATGCCTGCAGCTCTCGCAACAGCCATGTGTACGTGATGAGAACCCTGAATGAGGAACACTCAAGACAGCTATTCTTGAAAGAAGCATCATGGAAAGATTACCCACCAGGTTCAGAAGCAATCCTGAAGAAATGTGATGGTCTGCCGCTTGCTCTCGTCACAACAGCCCAATTCTTGCAAAGCAGATGTCAGCAGCAGCCTCTGGGATGCGCAAAGCTGTGCGACAACCTGGGTAAGCATCTTGTGACAGAAGACACCTTAGCAAGAATGAAGCGTGTGCTTGTTCACCATTACAGCAGCCTCCCTGGCCATGTCATCAAGGCCTGCTTGCTCTACCTGGGAATTTTCCCCAGTGGTCATCCTGTCAGGAGAAAAACTCTGATAAGGAGATGGTCAGCTGAAGGATTCGTGGGAGCAGACCATCACCGGAGCTCTCTAGATGTCGCCATCGACAGCTTCGAGGAGCTCGTTAACCGGAGCATCATCCAGCCTGTTGATGTGAGCAGCAACACTGAGGTGAAGACCTGCCAAACTCACGGTATGATGCTTGAGTTCATCCTGCACAAATCCATATGTGACAACTTCATCACATTTCTGTACGGTCAGGCTCGCCTGCCTGACAAGATCCGTTGCGTTTCCATACAACAGAACAGTGGTAGTAAGACCAGAGTGGATTCAGACATTGATCTGTCCCTTGTCCGGTCTCTGACGATCTTCGGAAAAGCGCACAAGTCTTTCCTGAATTTCTCCAGGTATAAACTTCTCCGGGTTTTGGATCTCGAAGAGTGTGATGAATTGGAGGACGAGCATCTGAAGAAGATATGCAAGCGGTTGCTTCTCAAGTACCTAAGCCTCGGCCGTGGAATTACAGTGCTTCCAAAGGAGATCGCAAAGCTGAAATTTCTTGAGACGCTCGATTTACGGCGAACGGTGATTAAGTTTCTTCCCATACAAGTGCTCGAGCTGCCATGTCTGATTCATCTGTTTGGAGTGTTCAAGATCCAAGATGCTGACCAGCAAATGAGGAAGCTCAAATCCTTCCTGACGGAGAAAAGCAAGTTGGAGACACTGGCCGGATTTGTCACCGATAGGTGCCAAACATTTCCTCAGCTCATGAAACATATGACCAACTTGGCAAAGGTGAAAATATGGTGCGAGAACACCGCAGATGCCAGCAGCAGCAGCAACTCTGATGTTCACCTGTCAGAGGCCATTCAGGAGTTCATCCAGAGAGGCACAGATGTGAACGATGTCCGATCACTCTCTCTCGATGTCGGCGAATGCTCCCAAGAATTTCTCAACTTCTCTTTAGGAGATTCATGCTACCTAAGCTCCCTGAAGCTGAAAGGAAACAAGATATGCAGGTTGCCACCGTTCGTCACCTCGCTGGCCGTTCTCACTGATCTGTGCCTCTCATCCTCTGATCGCCTCAGCTCTGATGTTCTTGCGGCCCTGAGCAACGTCCGCGCGCTGCGTTACCTGAAGCTGATCGCGCGTCACCTGGACAGGTTCGTGATCGAACGCGGCGATCTGCAGAGCCTGCGACGCCTGCACATCGTGGTGGTGTCCATGACGACGATGAGCAAGCAGCAGCCAGAGATCCAGGAGGGAGCCCTGCCGAATCTGGAGTCGTTCCATCTCCTCTGCAAGGATCTGGATGGCCCCTGCGGCCATGGAGGCATCAGGATCGACTCCCTCGGGCTCGGGTGCCTCAGGGAGATTGTTCTTGACGACGGAGTTCGTGAGACGGCGAAGGAGCAGTGGAAGGACGCGGCGAGGCGGCACCCGAAGCGGCCCAAGGTGGTGTTCGTCGGAGCGGGAGACGTCGTCGATCGGCGGCGGGTGGGTGCTGCTGCTGCTGCCGCGCCTGCAGCAGGAGAGAGCAATTCTGCGATGGCACCGGCGGCGGTGGCTTCGGTGGTGGCCGCCGGCGACGTCAAGAGGCCGGCTAGGGAGGAATCCGATATCTCCGCCGCGCTGGCGAGCCTTCCGGCGAAGATGGCGAGGCTGCTCGGCGCTGCGAGCATCCACCAGAGTAGTGGGACTCAGGGCGAGCTGTCCTGCGGCGGGAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAACGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAAGTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAGAGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGGGGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACATTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAATTAGCTATTAAATTAACTATAGATG]

[+] EMBL AK067524             [CTAGAGAGAGGTCTTCGTTGCTGCCTATCGTTCTTGTGTGTCCTAAAAAATTCGAGTGGAGAGGGAAGAACCAGTAGCGCTAGCGCAAGCAGATTGTGGTTGGCGGCCATGGAGACCGCGGTGCTGAGCGCCGTGCTCAGAACGCTGGGGCCGAAGCTCTACGCGTTCCTCCGTGACGGGCACGACCTGTTGCGGCGGGACCTGGAGCGCGACGTCCACTACATCCGGAACGAGCTCGCCATGATCGCCGCCGCGATCGAGGAGCACGACCGCCGCCCGCCGCCCGCCGCAGGCGACGTGCGGAGCGCCTGGATCCGCGGCGTGCGCGACCTGGCCTGCGACATGGAGGACTGCGTCGACCGCTTCGTGCACCGCGCCACCGGCCACGGCCTGGCCTCCATGGGCGCCCGCGCCAAGTTCGCCGCCGTGATCCAGGAGCTCAGGAGGAAATCCGAGGAGCTGTCCCGCCTCAGAGCCAGTTACGCCGCCGCCGCCGGCGAGCCCAGCTGCTGGGTGGCTACAGGATCATCCGCGTTGACCCTGCCGGCGTCGTCGTCTGAGGCGCACACCCTTGCATCTGACATCGTGGGGATGGACGGGCCCCGGGACGAGATTCTTGAGCTGATAGGGGAAACCCAGGGCCAGCTCAAGGTGATCTCCATTGTTGGGTTTGGTGGGTTAGGGAAGACGCTTCTTGCCAGGCAAATCTACGAGAGCGACGCCGTCGCCGCGCAATTCCATCCACGGATTTGGGTTCGTGCCGCGGGGAAGAACGCAGAGGATGTCCTCATGGACATTCTCCAGCAGCTGGGGATGCCGGTACATCACTGCCATGCCAGCAATCTCGTTGTAAATCTCAGAAATTGCCTTGAATCCAAGAGGTAAGAAACCAACCACTGACATGTTCAACTGTTGTTACTGTTTGTTACCAAATCAATCTCTGTTGTGTGTCCTTCATCCTACACCTTTTGCGGCCTCTGAAAGCAATTGCTTCCAAGAACTACGAGGGATTGAGGAGCACTAGAGTTGTTTTTCTTGATTTGTTTTATACTCAACTTAAACGAAGTATCAGAAGGTACAACGTATTTTAGTACTAATCTACATTTCAGTCATACAGAGTAAGGTGAGTACAAAAAGTTAGCCCTCAAGTGCAGAAAGAATCACATGTTCTTTGTTGTAATTGACGACATGCAGAGGGAATATTGGAACAGCTCTTTCAGAAATGCCTTTCCTTCTGATACGGGACTGAGAAGCATTGTGATCGTAACGACGGCCATCCAGTCCATAGCAAATGCCTGCAGCTCTCGCAACAGCCATGTGTACGTGATGAGAACCCTGAATGAGGAACACTCAAGACAGCTATTCTTGAAAGAAGCATCATGGAAAGATTACCCACCAGGTTCAGAAGCAATCCTGAAGAAATGTGATGGTCTGCCGCTTGCTCTCGTCACAACAGCCCAATTCTTGCAAAGCAGATGTCAGCAGCAGCCTCTGGGATGCGCAAAGCTGTGCGACAACCTGGGTAAGCATCTTGTGACAGAAGACACCTTAGCAAGAATGAAGCGTGTGCTTGTTCACCATTACAGCAGCCTCCCTGGCCATGTCATCAAGGCCTGCTTGCTCTACCTGGGAATTTTCCCCAGTGGTCATCCTGTCAGGAGAAAAACTCTGATAAGGAGATGGTCAGCTGAAGGATTCGTGGGAGCAGACCATCACCGGAGCTCTCTAGATGTCGCCATCGACAGCTTCGAGGAGCTCGTTAACCGGAGCATCATCCAGCCTGTTGATGTGAGCAGCAACACTGAGGTGAAGACCTGCCAAACTCACGGTATGATGCTTGAGTTCATCCTGCACAAATCCATATGTGACAACTTCATCACATTTCTGTACGGTCAGGCTCGCCTGCCTGACAAGATCCGTTGCGTTTCCATACAACAGAACAGTGGTAGTAAGACCAGAGTGGATTCAGACATTGATCTGTCCCTTGTCCGGTCTCTGACGATCTTCGGAAAAGCGCACAAGTCTTTCCTGAATTTCTCCAGGTATAAACTTCTCCGGGTTTTGGATCTCGAAGAGTGTGATGAATTGGAGGACGAGCATCTGAAGAAGATATGCAAGCGGTTGCTTCTCAAGTACCTAAGCCTCGGCCGTGGAATTACAGTGCTTCCAAAGGAGATCGCAAAGCTGAAATTTCTTGAGACGCTCGATTTACGGCGAACGGTGATTAAGTTTCTTCCCATACAAGTGCTCGAGCTGCCATGTCTGATTCATCTGTTTGGAGTGTTCAAGATCCAAGATGCTGACCAGCAAATGAGGAAGCTCAAATCCTTCCTGACGGAGAAAAGCAAGTTGGAGACACTGGCCGGATTTGTCACCGATAGGTGCCAAACATTTCCTCAGCTCATGAAACATATGACCAACTTGGCAAAGGTGAAAATATGGTGCGAGAACACCGCAGATGCCAGCAGCAGCAGCAACTCTGATGTTCACCTGTCAGAGGCCATTCAGGAGTTCATCCAGAGAGGCACAGATGTGAACGATGTCCGATCACTCTCTCTCGATGTCGGCGAATGCTCCCAAGAATTTCTCAACTTCTCTTTAGGAGATTCATGCTACCTAAGCTCCCTGAAGCTGAAAGGAAACAAGATATGCAGGTTGCCACCGTTCGTCACCTCGCTGGCCGTTCTCACTGATCTGTGCCTCTCATCCTCTGATCGCCTCAGCTCTGATGTTCTTGCGGCCCTGAGCAACGTCCGCGCGCTGCGTTACCTGAAGCTGATCGCGCGTCACCTGGACAGGTTCGTGATCGAACGCGGCGATCTGCAGAGCCTGCGACGCCTGCACATCGTGGTGGTGTCCATGACGACGATGAGCAAGCAGCAGCCAGAGATCCAGGAGGGAGCCCTGCCGAATCTGGAGTCGTTCCATCTCCTCTGCAAGGATCTGGATGGCCCCTGCGGCCATGGAGGCATCAGGATCGACTCCCTCGGGCTCGGGTGCCTCAGGGAGATTGTTCTTGACGACGGAGTTCGTGAGACGGCGAAGGAGCAGTGGAAGGACGCGGCGAGGCGGCACCCGAAGCGGCCCAAGGTGGTGTTCGTCGGAGCGGGAGACGTCGTCGATCGGCGGCGGGTGGGTGCTGCTGCTGCTGCCGCGCCTGCAGCAGGAGAGAGCAATTCTGCGATGGCACCGGCGGCGGTGGCTTCGGTGGTGGCCGCCGGCGACGTCAAGAGGCCGGCTAGGGAGGAATCCGATATCTCCGCCGCGCTGGCGAGCCTTCCGGCGAAGATGGCGAGGCTGCTCGGCGCTGCGAGCATCCACCAGAGTAGTGGGACTCAGGGCGAGCTGTCCTGCGGCGGGAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAACGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAAGTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAGAGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGGGGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACATTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAATTAGCTATTAAATTAACTATAGATG]




>consensus_4790#0
CTAGAGAGAGGTCTTCGTTGCTGCCTATCGTTCTTGTGTGTCCTAAAAAATTCGAGTGGA
GAGGGAAGAACCAGTAGCGCTAGCGCAAGCAGATTGTGGTTGGCGGCCATGGAGACCGCG
GTGCTGAGCGCCGTGCTCAGAACGCTGGGGCCGAAGCTCTACGCGTTCCTCCGTGACGGG
CACGACCTGTTGCGGCGGGACCTGGAGCGCGACGTCCACTACATCCGGAACGAGCTCGCC
ATGATCGCCGCCGCGATCGAGGAGCACGACCGCCGCCCGCCGCCCGCCGCAGGCGACGTG
CGGAGCGCCTGGATCCGCGGCGTGCGCGACCTGGCCTGCGACATGGAGGACTGCGTCGAC
CGCTTCGTGCACCGCGCCACCGGCCACGGCCTGGCCTCCATGGGCGCCCGCGCCAAGTTC
GCCGCCGTGATCCAGGAGCTCAGGAGGAAATCCGAGGAGCTGTCCCGCCTCAGAGCCAGT
TACGCCGCCGCCGCCGGCGAGCCCAGCTGCTGGGTGGCTACAGGATCATCCGCGTTGACC
CTGCCGGCGTCGTCGTCTGAGGCGCACACCCTTGCATCTGACATCGTGGGGATGGACGGG
CCCCGGGACGAGATTCTTGAGCTGATAGGGGAAACCCAGGGCCAGCTCAAGGTGATCTCC
ATTGTTGGGTTTGGTGGGTTAGGGAAGACGCTTCTTGCCAGGCAAATCTACGAGAGCGAC
GCCGTCGCCGCGCAATTCCATCCACGGATTTGGGTTCGTGCCGCGGGGAAGAACGCAGAG
GATGTCCTCATGGACATTCTCCAGCAGCTGGGGATGCCGGTACATCACTGCCATGCCAGC
AATCTCGTTGTAAATCTCAGAAATTGCCTTGAATCCAAGAGGTAAGAAACCAACCACTGA
CATGTTCAACTGTTGTTACTGTTTGTTACCAAATCAATCTCTGTTGTGTGTCCTTCATCC
TACACCTTTTGCGGCCTCTGAAAGCAATTGCTTCCAAGAACTACGAGGGATTGAGGAGCA
CTAGAGTTGTTTTTCTTGATTTGTTTTATACTCAACTTAAACGAAGTATCAGAAGGTACA
ACGTATTTTAGTACTAATCTACATTTCAGTCATACAGAGTAAGGTGAGTACAAAAAGTTA
GCCCTCAAGTGCAGAAAGAATCACATGTTCTTTGTTGTAATTGACGACATGCAGAGGGAA
TATTGGAACAGCTCTTTCAGAAATGCCTTTCCTTCTGATACGGGACTGAGAAGCATTGTG
ATCGTAACGACGGCCATCCAGTCCATAGCAAATGCCTGCAGCTCTCGCAACAGCCATGTG
TACGTGATGAGAACCCTGAATGAGGAACACTCAAGACAGCTATTCTTGAAAGAAGCATCA
TGGAAAGATTACCCACCAGGTTCAGAAGCAATCCTGAAGAAATGTGATGGTCTGCCGCTT
GCTCTCGTCACAACAGCCCAATTCTTGCAAAGCAGATGTCAGCAGCAGCCTCTGGGATGC
GCAAAGCTGTGCGACAACCTGGGTAAGCATCTTGTGACAGAAGACACCTTAGCAAGAATG
AAGCGTGTGCTTGTTCACCATTACAGCAGCCTCCCTGGCCATGTCATCAAGGCCTGCTTG
CTCTACCTGGGAATTTTCCCCAGTGGTCATCCTGTCAGGAGAAAAACTCTGATAAGGAGA
TGGTCAGCTGAAGGATTCGTGGGAGCAGACCATCACCGGAGCTCTCTAGATGTCGCCATC
GACAGCTTCGAGGAGCTCGTTAACCGGAGCATCATCCAGCCTGTTGATGTGAGCAGCAAC
ACTGAGGTGAAGACCTGCCAAACTCACGGTATGATGCTTGAGTTCATCCTGCACAAATCC
ATATGTGACAACTTCATCACATTTCTGTACGGTCAGGCTCGCCTGCCTGACAAGATCCGT
TGCGTTTCCATACAACAGAACAGTGGTAGTAAGACCAGAGTGGATTCAGACATTGATCTG
TCCCTTGTCCGGTCTCTGACGATCTTCGGAAAAGCGCACAAGTCTTTCCTGAATTTCTCC
AGGTATAAACTTCTCCGGGTTTTGGATCTCGAAGAGTGTGATGAATTGGAGGACGAGCAT
CTGAAGAAGATATGCAAGCGGTTGCTTCTCAAGTACCTAAGCCTCGGCCGTGGAATTACA
GTGCTTCCAAAGGAGATCGCAAAGCTGAAATTTCTTGAGACGCTCGATTTACGGCGAACG
GTGATTAAGTTTCTTCCCATACAAGTGCTCGAGCTGCCATGTCTGATTCATCTGTTTGGA
GTGTTCAAGATCCAAGATGCTGACCAGCAAATGAGGAAGCTCAAATCCTTCCTGACGGAG
AAAAGCAAGTTGGAGACACTGGCCGGATTTGTCACCGATAGGTGCCAAACATTTCCTCAG
CTCATGAAACATATGACCAACTTGGCAAAGGTGAAAATATGGTGCGAGAACACCGCAGAT
GCCAGCAGCAGCAGCAACTCTGATGTTCACCTGTCAGAGGCCATTCAGGAGTTCATCCAG
AGAGGCACAGATGTGAACGATGTCCGATCACTCTCTCTCGATGTCGGCGAATGCTCCCAA
GAATTTCTCAACTTCTCTTTAGGAGATTCATGCTACCTAAGCTCCCTGAAGCTGAAAGGA
AACAAGATATGCAGGTTGCCACCGTTCGTCACCTCGCTGGCCGTTCTCACTGATCTGTGC
CTCTCATCCTCTGATCGCCTCAGCTCTGATGTTCTTGCGGCCCTGAGCAACGTCCGCGCG
CTGCGTTACCTGAAGCTGATCGCGCGTCACCTGGACAGGTTCGTGATCGAACGCGGCGAT
CTGCAGAGCCTGCGACGCCTGCACATCGTGGTGGTGTCCATGACGACGATGAGCAAGCAG
CAGCCAGAGATCCAGGAGGGAGCCCTGCCGAATCTGGAGTCGTTCCATCTCCTCTGCAAG
GATCTGGATGGCCCCTGCGGCCATGGAGGCATCAGGATCGACTCCCTCGGGCTCGGGTGC
CTCAGGGAGATTGTTCTTGACGACGGAGTTCGTGAGACGGCGAAGGAGCAGTGGAAGGAC
GCGGCGAGGCGGCACCCGAAGCGGCCCAAGGTGGTGTTCGTCGGAGCGGGAGACGTCGTC
GATCGGCGGCGGGTGGGTGCTGCTGCTGCTGCCGCGCCTGCAGCAGGAGAGAGCAATTCT
GCGATGGCACCGGCGGCGGTGGCTTCGGTGGTGGCCGCCGGCGACGTCAAGAGGCCGGCT
AGGGAGGAATCCGATATCTCCGCCGCGCTGGCGAGCCTTCCGGCGAAGATGGCGAGGCTG
CTCGGCGCTGCGAGCATCCACCAGAGTAGTGGGACTCAGGGCGAGCTGTCCTGCGGCGGG
AACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAAC
GGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAAG
TTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAGA
GCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGGG
GAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACAT
TGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAAT
TAGCTATTAAATTAACTATAGATG

consensusID : consensus_4790#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 519
fasta sequence 
                              [CCGTTCGTCTGACTTGGGTATAGGGNCGAAAGACTAATCGACCCATCTAGTAGCTGGTTCCCTCCGAGCTGGTCCTGCGGCGGGAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAACGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAAGTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAGAGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGGGGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACATTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAATTAGCTATTAAATTAACTATAGATGATTTAAAGCTATTAGTTGGCTATACTATTAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU075865             [CCGTTCGTCTGACTTGGGTATAGGGNCGAAAGACTAATCGACCCATCTAGTAGCTGGTTCCCTCCGAGCTGGTCCTGCGGCGGGAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAACGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAAGTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAGAGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGGGGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACATTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAATTAGCTATTAAATTAACTATAGATGATTTAAAGCTATTAGTTGGCTATACTATTAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU075864             [   TTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAGCT GTCCTGCGGCGGGAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAACGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAAGTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAGAGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGGGGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACATTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAATTAGCTATTAAATTAACTATAGATGATTTAAAGCTATTAGTTGGCTA                             ]




>consensus_4790#1
CCGTTCGTCTGACTTGGGTATAGGGNCGAAAGACTAATCGACCCATCTAGTAGCTGGTTC
CCTCCGAGCTGGTCCTGCGGCGGGAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAG
ATACAGAGAGCATAGCGTGGTAACGGGTAACTATCTCTGTTACCTCTGTTCCATATTACA
TGTCGTTTTTAGTTATATTCTAAGTTGAACTTGTATAGTTTTGATCGAGTTACATATAAA
AGTAAATACTACTCCACTATAAGAGCAGGTACAATAGCAAATTATAAGCTAGCTATACAC
ATATTTTAAGAAGATAAAATAGGGGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGC
TATAGTATGGACTCTGAGACACATTGTGTGTGTATGATAGATGAGACCAGATTTAATAGG
GTAGTATGTAACTGTTGTATGAATTAGCTATTAAATTAACTATAGATGATTTAAAGCTAT
TAGTTGGCTATACTATTAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4790#0      CTAGAGAGAGGTCTTCGTTGCTGCCTATCGTTCTTGTGTGTCCTAAAAAATTCGAGTGGA 60
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GAGGGAAGAACCAGTAGCGCTAGCGCAAGCAGATTGTGGTTGGCGGCCATGGAGACCGCG 120
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GTGCTGAGCGCCGTGCTCAGAACGCTGGGGCCGAAGCTCTACGCGTTCCTCCGTGACGGG 180
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CACGACCTGTTGCGGCGGGACCTGGAGCGCGACGTCCACTACATCCGGAACGAGCTCGCC 240
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      ATGATCGCCGCCGCGATCGAGGAGCACGACCGCCGCCCGCCGCCCGCCGCAGGCGACGTG 300
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CGGAGCGCCTGGATCCGCGGCGTGCGCGACCTGGCCTGCGACATGGAGGACTGCGTCGAC 360
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CGCTTCGTGCACCGCGCCACCGGCCACGGCCTGGCCTCCATGGGCGCCCGCGCCAAGTTC 420
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCCGCCGTGATCCAGGAGCTCAGGAGGAAATCCGAGGAGCTGTCCCGCCTCAGAGCCAGT 480
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TACGCCGCCGCCGCCGGCGAGCCCAGCTGCTGGGTGGCTACAGGATCATCCGCGTTGACC 540
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTGCCGGCGTCGTCGTCTGAGGCGCACACCCTTGCATCTGACATCGTGGGGATGGACGGG 600
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CCCCGGGACGAGATTCTTGAGCTGATAGGGGAAACCCAGGGCCAGCTCAAGGTGATCTCC 660
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      ATTGTTGGGTTTGGTGGGTTAGGGAAGACGCTTCTTGCCAGGCAAATCTACGAGAGCGAC 720
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCCGTCGCCGCGCAATTCCATCCACGGATTTGGGTTCGTGCCGCGGGGAAGAACGCAGAG 780
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GATGTCCTCATGGACATTCTCCAGCAGCTGGGGATGCCGGTACATCACTGCCATGCCAGC 840
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AATCTCGTTGTAAATCTCAGAAATTGCCTTGAATCCAAGAGGTAAGAAACCAACCACTGA 900
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CATGTTCAACTGTTGTTACTGTTTGTTACCAAATCAATCTCTGTTGTGTGTCCTTCATCC 960
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TACACCTTTTGCGGCCTCTGAAAGCAATTGCTTCCAAGAACTACGAGGGATTGAGGAGCA 1020
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTAGAGTTGTTTTTCTTGATTTGTTTTATACTCAACTTAAACGAAGTATCAGAAGGTACA 1080
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      ACGTATTTTAGTACTAATCTACATTTCAGTCATACAGAGTAAGGTGAGTACAAAAAGTTA 1140
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCCCTCAAGTGCAGAAAGAATCACATGTTCTTTGTTGTAATTGACGACATGCAGAGGGAA 1200
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TATTGGAACAGCTCTTTCAGAAATGCCTTTCCTTCTGATACGGGACTGAGAAGCATTGTG 1260
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      ATCGTAACGACGGCCATCCAGTCCATAGCAAATGCCTGCAGCTCTCGCAACAGCCATGTG 1320
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TACGTGATGAGAACCCTGAATGAGGAACACTCAAGACAGCTATTCTTGAAAGAAGCATCA 1380
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TGGAAAGATTACCCACCAGGTTCAGAAGCAATCCTGAAGAAATGTGATGGTCTGCCGCTT 1440
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCTCTCGTCACAACAGCCCAATTCTTGCAAAGCAGATGTCAGCAGCAGCCTCTGGGATGC 1500
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCAAAGCTGTGCGACAACCTGGGTAAGCATCTTGTGACAGAAGACACCTTAGCAAGAATG 1560
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AAGCGTGTGCTTGTTCACCATTACAGCAGCCTCCCTGGCCATGTCATCAAGGCCTGCTTG 1620
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTCTACCTGGGAATTTTCCCCAGTGGTCATCCTGTCAGGAGAAAAACTCTGATAAGGAGA 1680
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TGGTCAGCTGAAGGATTCGTGGGAGCAGACCATCACCGGAGCTCTCTAGATGTCGCCATC 1740
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GACAGCTTCGAGGAGCTCGTTAACCGGAGCATCATCCAGCCTGTTGATGTGAGCAGCAAC 1800
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      ACTGAGGTGAAGACCTGCCAAACTCACGGTATGATGCTTGAGTTCATCCTGCACAAATCC 1860
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      ATATGTGACAACTTCATCACATTTCTGTACGGTCAGGCTCGCCTGCCTGACAAGATCCGT 1920
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TGCGTTTCCATACAACAGAACAGTGGTAGTAAGACCAGAGTGGATTCAGACATTGATCTG 1980
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      TCCCTTGTCCGGTCTCTGACGATCTTCGGAAAAGCGCACAAGTCTTTCCTGAATTTCTCC 2040
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AGGTATAAACTTCTCCGGGTTTTGGATCTCGAAGAGTGTGATGAATTGGAGGACGAGCAT 2100
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTGAAGAAGATATGCAAGCGGTTGCTTCTCAAGTACCTAAGCCTCGGCCGTGGAATTACA 2160
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GTGCTTCCAAAGGAGATCGCAAAGCTGAAATTTCTTGAGACGCTCGATTTACGGCGAACG 2220
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GTGATTAAGTTTCTTCCCATACAAGTGCTCGAGCTGCCATGTCTGATTCATCTGTTTGGA 2280
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GTGTTCAAGATCCAAGATGCTGACCAGCAAATGAGGAAGCTCAAATCCTTCCTGACGGAG 2340
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AAAAGCAAGTTGGAGACACTGGCCGGATTTGTCACCGATAGGTGCCAAACATTTCCTCAG 2400
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTCATGAAACATATGACCAACTTGGCAAAGGTGAAAATATGGTGCGAGAACACCGCAGAT 2460
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCCAGCAGCAGCAGCAACTCTGATGTTCACCTGTCAGAGGCCATTCAGGAGTTCATCCAG 2520
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AGAGGCACAGATGTGAACGATGTCCGATCACTCTCTCTCGATGTCGGCGAATGCTCCCAA 2580
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GAATTTCTCAACTTCTCTTTAGGAGATTCATGCTACCTAAGCTCCCTGAAGCTGAAAGGA 2640
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AACAAGATATGCAGGTTGCCACCGTTCGTCACCTCGCTGGCCGTTCTCACTGATCTGTGC 2700
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTCTCATCCTCTGATCGCCTCAGCTCTGATGTTCTTGCGGCCCTGAGCAACGTCCGCGCG 2760
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTGCGTTACCTGAAGCTGATCGCGCGTCACCTGGACAGGTTCGTGATCGAACGCGGCGAT 2820
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTGCAGAGCCTGCGACGCCTGCACATCGTGGTGGTGTCCATGACGACGATGAGCAAGCAG 2880
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CAGCCAGAGATCCAGGAGGGAGCCCTGCCGAATCTGGAGTCGTTCCATCTCCTCTGCAAG 2940
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GATCTGGATGGCCCCTGCGGCCATGGAGGCATCAGGATCGACTCCCTCGGGCTCGGGTGC 3000
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      CTCAGGGAGATTGTTCTTGACGACGGAGTTCGTGAGACGGCGAAGGAGCAGTGGAAGGAC 3060
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCGGCGAGGCGGCACCCGAAGCGGCCCAAGGTGGTGTTCGTCGGAGCGGGAGACGTCGTC 3120
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GATCGGCGGCGGGTGGGTGCTGCTGCTGCTGCCGCGCCTGCAGCAGGAGAGAGCAATTCT 3180
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      GCGATGGCACCGGCGGCGGTGGCTTCGGTGGTGGCCGCCGGCGACGTCAAGAGGCCGGCT 3240
consensus_4790#1      ------------------------------------------------------------
                                                                                  

consensus_4790#0      AGGGAGGAATCCGATATCTCCGCCGCGCTGGCGAGCCTTCCGGCGAAGATGGCGAGGCTG 3300
consensus_4790#1      ------------------------CCGTTCGTCTGACTTGGGTATAGGGNCGAAAGACTA 36
                                               ** * *   * ***  *   * *   *  ** ** 

consensus_4790#0      CTCGGCGCTGCGAGCATCCACCAGAGTAGTGGGACTCAGGGCGAGCTG-TCCTGCGGCGG 3359
consensus_4790#1      ATCGACCC-------ATCTA-----GTAGCTGG-TTCCCTCCGAGCTGGTCCTGCGGCGG 83
                       *** * *       *** *     ****  **  **    ******* ***********

consensus_4790#0      GAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAA 3419
consensus_4790#1      GAACGGAGCATCACAGCGCCATTTCAGCTAGACAGAGATACAGAGAGCATAGCGTGGTAA 143
                      ************************************************************

consensus_4790#0      CGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAA 3479
consensus_4790#1      CGGGTAACTATCTCTGTTACCTCTGTTCCATATTACATGTCGTTTTTAGTTATATTCTAA 203
                      ************************************************************

consensus_4790#0      GTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAG 3539
consensus_4790#1      GTTGAACTTGTATAGTTTTGATCGAGTTACATATAAAAGTAAATACTACTCCACTATAAG 263
                      ************************************************************

consensus_4790#0      AGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGG 3599
consensus_4790#1      AGCAGGTACAATAGCAAATTATAAGCTAGCTATACACATATTTTAAGAAGATAAAATAGG 323
                      ************************************************************

consensus_4790#0      GGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACA 3659
consensus_4790#1      GGAGAGAAAAGCAGTCGGCTACATATTTGTAGCCAGCTATAGTATGGACTCTGAGACACA 383
                      ************************************************************

consensus_4790#0      TTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAA 3719
consensus_4790#1      TTGTGTGTGTATGATAGATGAGACCAGATTTAATAGGGTAGTATGTAACTGTTGTATGAA 443
                      ************************************************************

consensus_4790#0      TTAGCTATTAAATTAACTATAGATG----------------------------------- 3744
consensus_4790#1      TTAGCTATTAAATTAACTATAGATGATTTAAAGCTATTAGTTGGCTATACTATTAAAAAA 503
                      *************************                                   

consensus_4790#0      ----------------
consensus_4790#1      AAAAAAAAAAAAAAAA 519


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)